Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc06g008900.3.1
CDS Infomation	RING/U-box superfamily protein (AHRD V3.3 *** AT4G03000.2)
Sequence	ATGAATGTAGGTGATCATAACAGCAGTGATGGTGCCAATGAGAAGTCATTGGTGATTTCA GCCCAGGAAAAAGGTAGTAGGAACAAGAGGAAGTTCTTATCTGAGTTTCCTCTAGACGTT CCTATTGATACACCTGTTCTGTCCCTTACAGAATTCCCAAGGTATGAGCTATTAGAAGAA AAACTCTTAAGCACCCCTAATGAGGCCAGTTCACTTGAGGGCAGGTGTCATCAGTCCAAT GAGAAACAAGGAGTTGAAACTTTACAACAAGCCGACTGGGATGATACAATAGCGTGTCAG CTAATGGAACTTTTATTTCATAACTTGTCCGGAACTTTTCAGAGCGCAATCAAGAGGATT GTTGAATGTGGATATAATGAGGAAACAGCTGAATGGGTCCTTTTGAGGAGTGGCCTTTAT CATGGTAGCAAGGATGCTGTCTCAACTATCGTGGATGGTGCCTTGGCTTTACTAAGCAGG GAAAAAGAATTGGATACTTCGACGTATCTCATATTTGAGGATTTGAATAGCCTGGTAGAG TACACGATGTTGGAGATGATATGTGTGCTGAGGGAGGTTAAGCCAGATTTTACCGTGGCA GAAGCAATGTGGTGTCTGTTAATATGTGATTTGAACCTGTTACATGCATGTTCCATAGAA AGAGATCTCTCGGTTGACTCATGCAGTTTGGAAAGTCCGAGAAAAAGCTCATCTGGTTCA AAACCTGCCCAACCAAAGGATGCTTTTGTAGTGAGTCAATTGGGCCTGGATAAACTACAA TTGTCAAAACCTTCAATGCCAATTGCTAAAGGTTTGCAGTCTGAAATTCCTTGTGATGAT CCAGTCGCTCTATTGTCTAATTCTATATACTCACATCTTCATGGAGTGGACATTACAGCA AACAGAAGTTCAGCTCGTTTTCCAGCAGCGAAGAGCAACTCTGCAGGGGTTAGCGGAGAG AGTGTACTGTCTATAACGAAAGCAGCAATTTTAGAAGAAAAAAATGGAACTGGGAGAAGG GGGTCTTCTATGATCTCCAAGAAAGATATGCTTAGACAAAAGACATTTCATTTTGAGAAA AGCTATAAAGGTCGTATGGGTAAGGGTTCCTTTAAAGCAAAACTCACCACCTGGAGCAGT ATGGTTTTGGACAAGACGCTGAACTCTGAATCTTGTTCTTCTGGTCTCGCAATGAAGAGT ACTAACTCTAAGGTAACTACTACAGTTAAATGCAATGGCCCTTTAGAAGTAGGCAGTTCT CATAGTTCAAGCACCTACCCCTCCATTGCACCTTCAAGTGAAACGGCTAGTGTGCCAGCG ACCCAAGATACTGTTTGTGCATTGCCTGCTGTAAACACAAATATTTCTGTACCACTGACT CCGGACCCCAAGTCTTCCTCAAATACCCCAGGCAGCACTCCTGCCCCTCCTAAAGTTCTA GACTATTATGCTGGTATCCCATACGATGAGTCTTTGGGGAAATATGTCCCACAAAATGAG AAAGACAAAATTGTTTTGTTGCGAATTGCCCGTATACAAACACTGCAGAAAGAGCTCCAA GGGTGGACTGATTGGGCCAATGAGAAGGTTATGCAGGCTGCTCGGAGGCTTGGCAAGGAC CAGGGGGAGCTTAAAATGCTGAAGCAAGAGAAAGAAGAGGCCGAGAAATTGCAGAAGGAA AAGCAAATGGTGGAAGAAAACACCATGAAGAGGCTTTCTGAAATGGAGTGTGCGTTGTCA AATGCCAGTGGCCAGAGTAAGATGGCTGACTCTACTCTTCACCGACTTAAGGAGGAGAAT GTTTCACTAAAGAAGGAGATGGATGCTGCGACGCTGGCTGCTCTGGAGTCTGCTACAAAC GTCCACCAAGCAGTTGCGAGGGAGCAGGAGATGCTGAAGAATTGTCAAGCATTGGAGATG GAGAACGGCTCTCTGCAGCATAATTTCTCAACCCTGAAACGAGAAGCAGTTCATTTTGAG CAGGAACTAGAGAGAGCCAAAACGCGCCAGAACCAGTTGAAGGTTCTGTTGGAGCAGGAG GAGAGGGAGAAACGAAGGGTTCTTCAGCAGGCTGATTCCCTTAAAGCTGAAAGGGAGAAA CGGGGAGTTCAGAGTAAAATGGAGGAGGATAATATTAGAGAAACGACAGAGAGAAACATG CAAAAATGCAAAGAAGATATCAAGAAGCTTGAAAGTGAAATCTCTCTATTAAGATATCAG TCTGAAGGTTCAAAAATAGAAGCTCTCAGAAGAGGTATCAACCACACGAGGCCTCAATCT CCTAAACTCACAAAGAGCTTGGCAGTCTTCGAGGAAAATCTTGGCTCTGCTAGTGTGGAA ATCGAGAGGGAGTGTGTTATGTGTTTGAGTGAGGAAATGACAGTGGTTTTCCTCCCATGC GCTCATCAGGTTCTTTGTGCACAATGCAGCGTGCTTCACGAAAAGCAAGGAATGAATGAC TGTCCTTCTTGTAGGACGCCAATTAAGAAGCGCATTAACGTTCAATTTGCTCGTTCATCT AGAAGTTAA

Peptide Sequence

PEP ID	Solyc06g008900.3.1
PEP Infomation	RING/U-box superfamily protein (AHRD V3.3 *** AT4G03000.2)
Sequence	MNVGDHNSSDGANEKSLVISAQEKGSRNKRKFLSEFPLDVPIDTPVLSLTEFPRYELLEE KLLSTPNEASSLEGRCHQSNEKQGVETLQQADWDDTIACQLMELLFHNLSGTFQSAIKRI VECGYNEETAEWVLLRSGLYHGSKDAVSTIVDGALALLSREKELDTSTYLIFEDLNSLVE YTMLEMICVLREVKPDFTVAEAMWCLLICDLNLLHACSIERDLSVDSCSLESPRKSSSGS KPAQPKDAFVVSQLGLDKLQLSKPSMPIAKGLQSEIPCDDPVALLSNSIYSHLHGVDITA NRSSARFPAAKSNSAGVSGESVLSITKAAILEEKNGTGRRGSSMISKKDMLRQKTFHFEK SYKGRMGKGSFKAKLTTWSSMVLDKTLNSESCSSGLAMKSTNSKVTTTVKCNGPLEVGSS HSSSTYPSIAPSSETASVPATQDTVCALPAVNTNISVPLTPDPKSSSNTPGSTPAPPKVL DYYAGIPYDESLGKYVPQNEKDKIVLLRIARIQTLQKELQGWTDWANEKVMQAARRLGKD QGELKMLKQEKEEAEKLQKEKQMVEENTMKRLSEMECALSNASGQSKMADSTLHRLKEEN VSLKKEMDAATLAALESATNVHQAVAREQEMLKNCQALEMENGSLQHNFSTLKREAVHFE QELERAKTRQNQLKVLLEQEEREKRRVLQQADSLKAEREKRGVQSKMEEDNIRETTERNM QKCKEDIKKLESEISLLRYQSEGSKIEALRRGINHTRPQSPKLTKSLAVFEENLGSASVE IERECVMCLSEEMTVVFLPCAHQVLCAQCSVLHEKQGMNDCPSCRTPIKKRINVQFARSS RS*

Transcript Sequence

Transcript ID	Solyc06g008900.3.1
Transcript Infomation	RING/U-box superfamily protein (AHRD V3.3 *** AT4G03000.2)
Sequence	GTATCGAACTTCGTTTTTTAATTTCCATTTTAAGGAAGAAACATAAATGACCTAACCTTG GTTAAAGTCGGCTAACCCACAGTTCCATTGCGACTCCAAGCCGCACTATCAGAGGAGCAT AGCAAAAGAGCCAAATACACACTGATACACAGTATTCTGCACTCAATAGCCTCTCAAACA GCAAAAGAAGTAGAAAAGAATTCACCGCATTTGCGATTTTCGTTAGGAACAACATCTCTA AAATTGTTTCTTTGGCAGCTTCACCTGTACTGTGTTACAGAGATAAAGATACGAGCAATA GGATTTGTGCAAAAAATTTCATTATCATTGAAAAGATAATGAATGTAGGTGATCATAACA GCAGTGATGGTGCCAATGAGAAGTCATTGGTGATTTCAGCCCAGGAAAAAGGTAGTAGGA ACAAGAGGAAGTTCTTATCTGAGTTTCCTCTAGACGTTCCTATTGATACACCTGTTCTGT CCCTTACAGAATTCCCAAGGTATGAGCTATTAGAAGAAAAACTCTTAAGCACCCCTAATG AGGCCAGTTCACTTGAGGGCAGGTGTCATCAGTCCAATGAGAAACAAGGAGTTGAAACTT TACAACAAGCCGACTGGGATGATACAATAGCGTGTCAGCTAATGGAACTTTTATTTCATA ACTTGTCCGGAACTTTTCAGAGCGCAATCAAGAGGATTGTTGAATGTGGATATAATGAGG AAACAGCTGAATGGGTCCTTTTGAGGAGTGGCCTTTATCATGGTAGCAAGGATGCTGTCT CAACTATCGTGGATGGTGCCTTGGCTTTACTAAGCAGGGAAAAAGAATTGGATACTTCGA CGTATCTCATATTTGAGGATTTGAATAGCCTGGTAGAGTACACGATGTTGGAGATGATAT GTGTGCTGAGGGAGGTTAAGCCAGATTTTACCGTGGCAGAAGCAATGTGGTGTCTGTTAA TATGTGATTTGAACCTGTTACATGCATGTTCCATAGAAAGAGATCTCTCGGTTGACTCAT GCAGTTTGGAAAGTCCGAGAAAAAGCTCATCTGGTTCAAAACCTGCCCAACCAAAGGATG CTTTTGTAGTGAGTCAATTGGGCCTGGATAAACTACAATTGTCAAAACCTTCAATGCCAA TTGCTAAAGGTTTGCAGTCTGAAATTCCTTGTGATGATCCAGTCGCTCTATTGTCTAATT CTATATACTCACATCTTCATGGAGTGGACATTACAGCAAACAGAAGTTCAGCTCGTTTTC CAGCAGCGAAGAGCAACTCTGCAGGGGTTAGCGGAGAGAGTGTACTGTCTATAACGAAAG CAGCAATTTTAGAAGAAAAAAATGGAACTGGGAGAAGGGGGTCTTCTATGATCTCCAAGA AAGATATGCTTAGACAAAAGACATTTCATTTTGAGAAAAGCTATAAAGGTCGTATGGGTA AGGGTTCCTTTAAAGCAAAACTCACCACCTGGAGCAGTATGGTTTTGGACAAGACGCTGA ACTCTGAATCTTGTTCTTCTGGTCTCGCAATGAAGAGTACTAACTCTAAGGTAACTACTA CAGTTAAATGCAATGGCCCTTTAGAAGTAGGCAGTTCTCATAGTTCAAGCACCTACCCCT CCATTGCACCTTCAAGTGAAACGGCTAGTGTGCCAGCGACCCAAGATACTGTTTGTGCAT TGCCTGCTGTAAACACAAATATTTCTGTACCACTGACTCCGGACCCCAAGTCTTCCTCAA ATACCCCAGGCAGCACTCCTGCCCCTCCTAAAGTTCTAGACTATTATGCTGGTATCCCAT ACGATGAGTCTTTGGGGAAATATGTCCCACAAAATGAGAAAGACAAAATTGTTTTGTTGC GAATTGCCCGTATACAAACACTGCAGAAAGAGCTCCAAGGGTGGACTGATTGGGCCAATG AGAAGGTTATGCAGGCTGCTCGGAGGCTTGGCAAGGACCAGGGGGAGCTTAAAATGCTGA AGCAAGAGAAAGAAGAGGCCGAGAAATTGCAGAAGGAAAAGCAAATGGTGGAAGAAAACA CCATGAAGAGGCTTTCTGAAATGGAGTGTGCGTTGTCAAATGCCAGTGGCCAGAGTAAGA TGGCTGACTCTACTCTTCACCGACTTAAGGAGGAGAATGTTTCACTAAAGAAGGAGATGG ATGCTGCGACGCTGGCTGCTCTGGAGTCTGCTACAAACGTCCACCAAGCAGTTGCGAGGG AGCAGGAGATGCTGAAGAATTGTCAAGCATTGGAGATGGAGAACGGCTCTCTGCAGCATA ATTTCTCAACCCTGAAACGAGAAGCAGTTCATTTTGAGCAGGAACTAGAGAGAGCCAAAA CGCGCCAGAACCAGTTGAAGGTTCTGTTGGAGCAGGAGGAGAGGGAGAAACGAAGGGTTC TTCAGCAGGCTGATTCCCTTAAAGCTGAAAGGGAGAAACGGGGAGTTCAGAGTAAAATGG AGGAGGATAATATTAGAGAAACGACAGAGAGAAACATGCAAAAATGCAAAGAAGATATCA AGAAGCTTGAAAGTGAAATCTCTCTATTAAGATATCAGTCTGAAGGTTCAAAAATAGAAG CTCTCAGAAGAGGTATCAACCACACGAGGCCTCAATCTCCTAAACTCACAAAGAGCTTGG CAGTCTTCGAGGAAAATCTTGGCTCTGCTAGTGTGGAAATCGAGAGGGAGTGTGTTATGT GTTTGAGTGAGGAAATGACAGTGGTTTTCCTCCCATGCGCTCATCAGGTTCTTTGTGCAC AATGCAGCGTGCTTCACGAAAAGCAAGGAATGAATGACTGTCCTTCTTGTAGGACGCCAA TTAAGAAGCGCATTAACGTTCAATTTGCTCGTTCATCTAGAAGTTAACACCAGAATCATC TTAAGAATGATGTCAAGGGACAGACAAGACAACTTATCGTTTCATATTGTCCCCTTTTTT GGCCTTCACATCTTACCTTAGCTGAAATAGTTGATACAAAAAGGTATAGACAGGTAGTAT TACAAGATTGTAAATTTTTAGTCAAAAAGTCCAAGTATCAAGTGTTAGACCTTATTGTAC TTAACAAGAGAACTTGGTTCAATGTCTTTTGTATAATGGTTTCTTTTTGCTTGCTGATTC CAGTTTCCTAGTGCTATTAGTACATATTATTTTTGCTTTGCTTTGGTTATTATAAAACAT GTTGTTACTTTTTTCATTATTTCTACTTGATTTCATTTTCACACTATTTTTTATAC