Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g008500.3.1
CDS Infomation

Ankyrin repeat domain protein, putative (AHRD V3.3 *** B9T1B3_RICCO)
Sequence

ATGTGGCAACAACAATTGAAAAATGAGTTACTGTATCAACAAGTCATTGAAGGAAATGCT
GAAAATATCAAAGCTCTTTACAATGATGGTGCTGATGTTGAGTGGATCGACGATGAAGGA
AAGACACCATTGATTGTAGCGTGCATGAAGCCGAATGGCTTGAATGTTGCAAAAACTTTG
CTTGAGCTTGGTGCTAATGTCAATGCTTACCGGCCAGGATATTATGCTGGGACTGTGCTA
CATCATGCAGCTAAGAGAGGTCTGGATGATACTGTGCAATTGCTTCTTTCCTATGGAGCA
AATCCATTGATCAAGAATGATGCTCGCCAAACTCCACTTGAAATAGCTCGAGCAAAGGGT
TTTACCGATGTCGTCCGTACTATCGAGAAACAAATCTGCATTTTCTCGGGCTGGATGAGG
GAGTTCTATGGCCCAAGATTTCTTGAAGCTTTAGCTCCTCAATTATTATCTAGGAAGATT
TGGGTTGTAGTCATGCCTTGTGGTATAGCTGATCCTGTGAGGCATCTTAAATTACAACTG
GTGATTTACTCATCGCTACAGGACGCCCAACCTCGTAAAGTAATTGTCTTATGGAGGGCT
ATTGTTGAGGAGATAAGGAGGAAACAATCAGATCCTATGCTGACAATTTTTGACAGGATC
AAAAATACTCGATATAAGATTTCATCAGTGAACGATTCTGATAAACAACAGCTTGTATTG
CTGCGCAAAGCATGTATTGCTGCAATTGAGGTCCTGCCTTTTCGCTTACCACAAATTACC
CAAACTGAAACTGCTGCACAAGCAATGGAATTAGCAATTGGAATCAACGCTGCCATTGAT
TCTGCTAAAGTAAATAAGATTCTACATTATCATGGACAAAGCTCTGGAGTGAAAAATAAA
AATGACTGGTGTAGTAACACCAATGATTCTGCTCACAGTGGATGGGGTTCACTTGTCAGA
TCCGTGCCTAGATCTGAAATAACTAACCATGATTGGACGGATGACCGAACTAAGGTCCAA
CAATATGGATGGGAAAATACTGCAGATGTATCCAGTCAACGACAACAACGATCACTTGCT
AAATCCACACCCTCTGAACTAAGCTGCAATGGATGGATCAATGAGCTTGATGTAGAGGAG
TACAATGGATGGGGCGTGCCCGAGCCTCGGCAGGGACGTAGAGATGCCTCAGCTGAAGTT
CATTATCAAGGATGGGAAAACACATCAAAGGACAAAATAGCATCCTCGGATGTAAGTAGC
TGCAAAGCGATGGACAAGACAGACAATGCACCTGAATTTAGGCCTATTGTCTATCCAGGT
GAAAACGCTGAAACTCAAGAGGGTAACAATCCTGCTTTTGATTTTGCGGTCCCTTCAGCT
CCACCAGTTCCAAAAGAAATTGAAGACGTTCATTATCCTGTCATAGATCTTAGCCCATTG
CCCTTGTCGACTCCTCCTGTGGAACAAAAAACAGCTTCTGTTACGACTCAAAAGGAAAAA
GAACATAAGCCTGCATTGTGTATAATATGTTGGGAAGCTTCAGTTGAAGGAGCATGTGTA
CCTTGTGGTCACATGGTTGGCTGCATGCAGTGTTTGAACCAGATCATCAAATCCAAGATA
GGGGCGTGTCCCGTTTGTCGAGTAAAAATCGACCAGGTTATAAAGCTCTACTCTGTTTGA

Peptide Sequence

PEP ID

Solyc06g008500.3.1
PEP Infomation

Ankyrin repeat domain protein, putative (AHRD V3.3 *** B9T1B3_RICCO)
Sequence

MWQQQLKNELLYQQVIEGNAENIKALYNDGADVEWIDDEGKTPLIVACMKPNGLNVAKTL
LELGANVNAYRPGYYAGTVLHHAAKRGLDDTVQLLLSYGANPLIKNDARQTPLEIARAKG
FTDVVRTIEKQICIFSGWMREFYGPRFLEALAPQLLSRKIWVVVMPCGIADPVRHLKLQL
VIYSSLQDAQPRKVIVLWRAIVEEIRRKQSDPMLTIFDRIKNTRYKISSVNDSDKQQLVL
LRKACIAAIEVLPFRLPQITQTETAAQAMELAIGINAAIDSAKVNKILHYHGQSSGVKNK
NDWCSNTNDSAHSGWGSLVRSVPRSEITNHDWTDDRTKVQQYGWENTADVSSQRQQRSLA
KSTPSELSCNGWINELDVEEYNGWGVPEPRQGRRDASAEVHYQGWENTSKDKIASSDVSS
CKAMDKTDNAPEFRPIVYPGENAETQEGNNPAFDFAVPSAPPVPKEIEDVHYPVIDLSPL
PLSTPPVEQKTASVTTQKEKEHKPALCIICWEASVEGACVPCGHMVGCMQCLNQIIKSKI
GACPVCRVKIDQVIKLYSV*

Transcript Sequence

Transcript ID

Solyc06g008500.3.1
Transcript Infomation

Ankyrin repeat domain protein, putative (AHRD V3.3 *** B9T1B3_RICCO)
Sequence

TTCTACAGAGAGTGCCCACACATAAATACAAATGACTGCACATAAAATTTTCTCATATTT
GAAGTGAAATCTTTAGCAATTTCATTAATGTGGCAACAACAATTGAAAAATGAGTTACTG
TATCAACAAGTCATTGAAGGAAATGCTGAAAATATCAAAGCTCTTTACAATGATGGTGCT
GATGTTGAGTGGATCGACGATGAAGGAAAGACACCATTGATTGTAGCGTGCATGAAGCCG
AATGGCTTGAATGTTGCAAAAACTTTGCTTGAGCTTGGTGCTAATGTCAATGCTTACCGG
CCAGGATATTATGCTGGGACTGTGCTACATCATGCAGCTAAGAGAGGTCTGGATGATACT
GTGCAATTGCTTCTTTCCTATGGAGCAAATCCATTGATCAAGAATGATGCTCGCCAAACT
CCACTTGAAATAGCTCGAGCAAAGGGTTTTACCGATGTCGTCCGTACTATCGAGAAACAA
ATCTGCATTTTCTCGGGCTGGATGAGGGAGTTCTATGGCCCAAGATTTCTTGAAGCTTTA
GCTCCTCAATTATTATCTAGGAAGATTTGGGTTGTAGTCATGCCTTGTGGTATAGCTGAT
CCTGTGAGGCATCTTAAATTACAACTGGTGATTTACTCATCGCTACAGGACGCCCAACCT
CGTAAAGTAATTGTCTTATGGAGGGCTATTGTTGAGGAGATAAGGAGGAAACAATCAGAT
CCTATGCTGACAATTTTTGACAGGATCAAAAATACTCGATATAAGATTTCATCAGTGAAC
GATTCTGATAAACAACAGCTTGTATTGCTGCGCAAAGCATGTATTGCTGCAATTGAGGTC
CTGCCTTTTCGCTTACCACAAATTACCCAAACTGAAACTGCTGCACAAGCAATGGAATTA
GCAATTGGAATCAACGCTGCCATTGATTCTGCTAAAGTAAATAAGATTCTACATTATCAT
GGACAAAGCTCTGGAGTGAAAAATAAAAATGACTGGTGTAGTAACACCAATGATTCTGCT
CACAGTGGATGGGGTTCACTTGTCAGATCCGTGCCTAGATCTGAAATAACTAACCATGAT
TGGACGGATGACCGAACTAAGGTCCAACAATATGGATGGGAAAATACTGCAGATGTATCC
AGTCAACGACAACAACGATCACTTGCTAAATCCACACCCTCTGAACTAAGCTGCAATGGA
TGGATCAATGAGCTTGATGTAGAGGAGTACAATGGATGGGGCGTGCCCGAGCCTCGGCAG
GGACGTAGAGATGCCTCAGCTGAAGTTCATTATCAAGGATGGGAAAACACATCAAAGGAC
AAAATAGCATCCTCGGATGTAAGTAGCTGCAAAGCGATGGACAAGACAGACAATGCACCT
GAATTTAGGCCTATTGTCTATCCAGGTGAAAACGCTGAAACTCAAGAGGGTAACAATCCT
GCTTTTGATTTTGCGGTCCCTTCAGCTCCACCAGTTCCAAAAGAAATTGAAGACGTTCAT
TATCCTGTCATAGATCTTAGCCCATTGCCCTTGTCGACTCCTCCTGTGGAACAAAAAACA
GCTTCTGTTACGACTCAAAAGGAAAAAGAACATAAGCCTGCATTGTGTATAATATGTTGG
GAAGCTTCAGTTGAAGGAGCATGTGTACCTTGTGGTCACATGGTTGGCTGCATGCAGTGT
TTGAACCAGATCATCAAATCCAAGATAGGGGCGTGTCCCGTTTGTCGAGTAAAAATCGAC
CAGGTTATAAAGCTCTACTCTGTTTGAGAGGTAAATCTAGTATTTACTGTTCACATTCCT
TATTTATCATGTCATTCTCCCAGAAAATCTAGCCTAGCTATCATAATAAACTACATTCGT
GGGCAACGTGATCTTATCTAATGTCACTTCAATTTCATTTTTATGGTCCGCTGTAATTAC
TTTATTTTACCTTGTAATACTTACACTTGAGCGTTCTTCTCCATAGTTTTCGTCGACTCA
CTCACTAGCTAGTTTCTATAATTACAGTTTCATGTGGCTCGCTCTAATCAGGTATACTAT
TAGTTAGTTCATGCATAGTTTAGATTAAACATGTACCTGCTCAAGGTAAATATACATCA