Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc06g007970.3.1
CDS Infomation	Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *** AT5G48850.1)
Sequence	ATGGATAAGAAAGAGGAAGAACAATTTCATGTATTTTATAAGGTTCCTTCAGGTGATGGA CCTTATGTTAGAGCCAAACATGCTCAGCTAATTATGAAGGATCCAGAAGGATCAATACTA TGGTTTATGAAAGCAATAAATGAAGGGGACAGAGTGGACAGTGCACTAAAAGACATGGCA GTAGTGATGAAGCAATTGGATAGAAGTGAAGAAGCAATTGTAGCAATCAAATCTTTTAGA TACCTTTGTTCTAAACAAGCTCAAGAATCCCTAGACAATGTCCTCCTTGATCTCTTTAAG AAATGTGGAAAAGTGGAGGAACAAATAGTGTTATTAAAGCAAAAGCTAAGACAAATATAT GAAGGGAAGTTGTTCAATGGGAAGCCTATTAAAATTGCTAGATCTCATGGAAAGAAGATT CAAGTTACTATCACCCAAGAGACTGCAAGAGTTCTGGGTAATTTGGGTTGGGCTTATATG CAAAAAGGAAGTTTTATGGCTGCAGAAGTGGTGTACAAGAAAGCCCAAATGATTTATGCA GACAGTAATAAGGCCTGCAACTTGGCCCAATGTTTGATCAAGCAAGCCCGATATGACGAG GCCCGTTATATCCTCGAAGATGTTTGGAGAGGTAACTATTTAGGTTCTGATGATACAAAA ACAAAGAATCGAGTCGAAGAATTATTGTTGGAATTGGACTTGAAGCAACCCCCACCCTTC TTACAAAACATACCGGGCCTCGATTTGGATGATGATTTTGTAAATGGGCTTGACCATTTG ATAAATGAATGGGCCCAGCCCAAATCAAGAAGGTTGCCAATATTTGAGGAGATCTCTACA TTTAGAGATCAATTGGCATGTTGA

Peptide Sequence

PEP ID	Solyc06g007970.3.1
PEP Infomation	Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *** AT5G48850.1)
Sequence	MDKKEEEQFHVFYKVPSGDGPYVRAKHAQLIMKDPEGSILWFMKAINEGDRVDSALKDMA VVMKQLDRSEEAIVAIKSFRYLCSKQAQESLDNVLLDLFKKCGKVEEQIVLLKQKLRQIY EGKLFNGKPIKIARSHGKKIQVTITQETARVLGNLGWAYMQKGSFMAAEVVYKKAQMIYA DSNKACNLAQCLIKQARYDEARYILEDVWRGNYLGSDDTKTKNRVEELLLELDLKQPPPF LQNIPGLDLDDDFVNGLDHLINEWAQPKSRRLPIFEEISTFRDQLAC*

Transcript Sequence

Transcript ID	Solyc06g007970.3.1
Transcript Infomation	Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *** AT5G48850.1)
Sequence	CGTCGACTTTACGATTTAAAGCCGTTGAAAAAAAAATAGCCAATTAATATAGACGGATAG TTATCTAGGTTCAATCTTGTAGCCCCCAATGATGAATTATTGGTGTAGATTGGGGAAAAA TTTGTCATCTATATATGTTTATTAATGAATCTCACACCAGATTCATGGATCTTATCACTT TAGCTTTTTGCATATTATTATTAAAAAAATATATATAGAACTATATATTATACACATCCT CCCATTTTTATTGAAAGAAATATATATTAAAGACTATATATTATAAAAATAAAGATGGAT AAGAAAGAGGAAGAACAATTTCATGTATTTTATAAGGTTCCTTCAGGTGATGGACCTTAT GTTAGAGCCAAACATGCTCAGCTAATTATGAAGGATCCAGAAGGATCAATACTATGGTTT ATGAAAGCAATAAATGAAGGGGACAGAGTGGACAGTGCACTAAAAGACATGGCAGTAGTG ATGAAGCAATTGGATAGAAGTGAAGAAGCAATTGTAGCAATCAAATCTTTTAGATACCTT TGTTCTAAACAAGCTCAAGAATCCCTAGACAATGTCCTCCTTGATCTCTTTAAGAAATGT GGAAAAGTGGAGGAACAAATAGTGTTATTAAAGCAAAAGCTAAGACAAATATATGAAGGG AAGTTGTTCAATGGGAAGCCTATTAAAATTGCTAGATCTCATGGAAAGAAGATTCAAGTT ACTATCACCCAAGAGACTGCAAGAGTTCTGGGTAATTTGGGTTGGGCTTATATGCAAAAA GGAAGTTTTATGGCTGCAGAAGTGGTGTACAAGAAAGCCCAAATGATTTATGCAGACAGT AATAAGGCCTGCAACTTGGCCCAATGTTTGATCAAGCAAGCCCGATATGACGAGGCCCGT TATATCCTCGAAGATGTTTGGAGAGGTAACTATTTAGGTTCTGATGATACAAAAACAAAG AATCGAGTCGAAGAATTATTGTTGGAATTGGACTTGAAGCAACCCCCACCCTTCTTACAA AACATACCGGGCCTCGATTTGGATGATGATTTTGTAAATGGGCTTGACCATTTGATAAAT GAATGGGCCCAGCCCAAATCAAGAAGGTTGCCAATATTTGAGGAGATCTCTACATTTAGA GATCAATTGGCATGTTGAATGGATTTATGTTTTTAGAATTTGGGATTTATGGTTTAGTAA GGTCTAGATGTTAATTATATGAAATTAGATGTACAAAGTAAGAGGCATGTGATATGTAAA AATTGTAATGTAAATCATAGCATGGGTCAAAGTTCGAGAAATGTTACCCTTT