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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g007680.1.1
CDS Infomation

F-box/LRR protein (AHRD V3.3 *** A0A072TPF2_MEDTR)
Sequence

ATGGATAATCCATCATCTAACTTGGTAGAAATGGATAATCCATCAGATGACTTCTCTGGA
TATATCATGCAGCTTCCTGACGATTGTTTACTCTTTATTTTCCAACACCTTGACTGTGGA
TCTGACCGTGAATCGTTTGGTTTAACCTGTCGTCGCTGGCTTCAAATTCAAAATCTAAAT
AGAAGATCTTTACAGTTCCAATGCTCTTTCACTGTGCTTAATTTTTCATCGTTATCTCAA
ACTAATACTCAAATCAGTACATTACACTTATATAGGCTTCTGAACCGTTTCCAGAACCTA
GAATCATTGTCTCTGTCCGGATGCACTGAGCTTCCAGATTCGGGTTTGTCTTTGTTACCA
CATCATGGATCGAAACTGCGAAGTCTTCATCTAGACTGCTGTTTTGGGATAACTGATAGT
GGTCTTTCCTGCGTGGCATCTGGCTGTTCTTTGTTGGTAATACTAAGTCTTTACCGGTGT
AATGTTACAGATTGTGGGTTAGAGGCCTTATCTAATTCTTGTCTAGCTTTAGAAGATCTA
AATCTCTCGTATTGCTCTCGAATCTCTGATTATGGCGTAAAAGCTATTTCACAGAACTGC
CGTCATCTTAGAGCAATCAGGATATCCTACTGTAGAAATCTAACTGGTGCTGGCTTTCAA
GGATGTTCTCAAACTCTGACTCATTTGGAAGCCGATTACTGTAGGCTTGAACCTAATGGA
ATACGGAGTATCCTAAGTGGAGGTGGTGTTGAATACTTGAGTGTGTCTAACTTGACCTGG
TGCACGCGTGTGAATGGTCTGGTAGCTATTAGCATCGGATTTGCTGCAAAGTTAAGAGTG
TTGAATTTCCGTTCCAGCAGAACGATTGGCAATGATTGTATCATGACAATAGCGAAGGGT
TGTCCATCGCTTCAGGAATGGAACTTAGCAATATGTCATGAGGTCAAGATAGCAGGTTGG
GAATCTATTGCATCACATTGTCATAACTTGAAAACGCTACATGTGAATCGGTGTAGAAAT
CTTTGTGATCGTGGACTGCAGGCATTGAGGACCGGATGCAAACGTCTCTCAATTCTTTAC
ATCACCAGAAGCTCTCAGATCAGTGGTGTAGCGTTGGAAATTTTTAAACTTGCTAGAAGT
AATGTAGAGGTCAAAGAAGAAGAAGTAATGTGCATTTGCCCTCACGGAGCCTTCAGGTTT
TAA

Peptide Sequence

PEP ID

Solyc06g007680.1.1
PEP Infomation

F-box/LRR protein (AHRD V3.3 *** A0A072TPF2_MEDTR)
Sequence

MDNPSSNLVEMDNPSDDFSGYIMQLPDDCLLFIFQHLDCGSDRESFGLTCRRWLQIQNLN
RRSLQFQCSFTVLNFSSLSQTNTQISTLHLYRLLNRFQNLESLSLSGCTELPDSGLSLLP
HHGSKLRSLHLDCCFGITDSGLSCVASGCSLLVILSLYRCNVTDCGLEALSNSCLALEDL
NLSYCSRISDYGVKAISQNCRHLRAIRISYCRNLTGAGFQGCSQTLTHLEADYCRLEPNG
IRSILSGGGVEYLSVSNLTWCTRVNGLVAISIGFAAKLRVLNFRSSRTIGNDCIMTIAKG
CPSLQEWNLAICHEVKIAGWESIASHCHNLKTLHVNRCRNLCDRGLQALRTGCKRLSILY
ITRSSQISGVALEIFKLARSNVEVKEEEVMCICPHGAFRF*

Transcript Sequence

Transcript ID

Solyc06g007680.1.1
Transcript Infomation

F-box/LRR protein (AHRD V3.3 *** A0A072TPF2_MEDTR)
Sequence

ATGGATAATCCATCATCTAACTTGGTAGAAATGGATAATCCATCAGATGACTTCTCTGGA
TATATCATGCAGCTTCCTGACGATTGTTTACTCTTTATTTTCCAACACCTTGACTGTGGA
TCTGACCGTGAATCGTTTGGTTTAACCTGTCGTCGCTGGCTTCAAATTCAAAATCTAAAT
AGAAGATCTTTACAGTTCCAATGCTCTTTCACTGTGCTTAATTTTTCATCGTTATCTCAA
ACTAATACTCAAATCAGTACATTACACTTATATAGGCTTCTGAACCGTTTCCAGAACCTA
GAATCATTGTCTCTGTCCGGATGCACTGAGCTTCCAGATTCGGGTTTGTCTTTGTTACCA
CATCATGGATCGAAACTGCGAAGTCTTCATCTAGACTGCTGTTTTGGGATAACTGATAGT
GGTCTTTCCTGCGTGGCATCTGGCTGTTCTTTGTTGGTAATACTAAGTCTTTACCGGTGT
AATGTTACAGATTGTGGGTTAGAGGCCTTATCTAATTCTTGTCTAGCTTTAGAAGATCTA
AATCTCTCGTATTGCTCTCGAATCTCTGATTATGGCGTAAAAGCTATTTCACAGAACTGC
CGTCATCTTAGAGCAATCAGGATATCCTACTGTAGAAATCTAACTGGTGCTGGCTTTCAA
GGATGTTCTCAAACTCTGACTCATTTGGAAGCCGATTACTGTAGGCTTGAACCTAATGGA
ATACGGAGTATCCTAAGTGGAGGTGGTGTTGAATACTTGAGTGTGTCTAACTTGACCTGG
TGCACGCGTGTGAATGGTCTGGTAGCTATTAGCATCGGATTTGCTGCAAAGTTAAGAGTG
TTGAATTTCCGTTCCAGCAGAACGATTGGCAATGATTGTATCATGACAATAGCGAAGGGT
TGTCCATCGCTTCAGGAATGGAACTTAGCAATATGTCATGAGGTCAAGATAGCAGGTTGG
GAATCTATTGCATCACATTGTCATAACTTGAAAACGCTACATGTGAATCGGTGTAGAAAT
CTTTGTGATCGTGGACTGCAGGCATTGAGGACCGGATGCAAACGTCTCTCAATTCTTTAC
ATCACCAGAAGCTCTCAGATCAGTGGTGTAGCGTTGGAAATTTTTAAACTTGCTAGAAGT
AATGTAGAGGTCAAAGAAGAAGAAGTAATGTGCATTTGCCCTCACGGAGCCTTCAGGTTT
TAA