Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g007430.2.1
CDS Infomation

Non-specific serine/threonine protein kinase (AHRD V3.3 *** A0A0V0IRP8_SOLCH)
Sequence

ATGTGTTTGAGTGTCTCGAATTCTAAAAGTGATCATCTCGAGGCTTTGGGCTTAGTAGAG
CTGACAATTTTCGTTCTTGAGAACATTGATCCTAGGTGCAACGGCCATAGCATCATTGCT
TGCGCCAAGATGCAAAGTGCATGGAGTAGCTGTACATTGTGTGTTGTGTTAATAAACGAT
AATTTGTCTAAGTTTGTATGTACTAGAAAGAGATATATAGATAGATTTTTTTTAATGGCC
AATAAAGGAAGCATACTGATGGAGCGGTATGAAGTGGGCAGATTATTAGGTCAAGGTACA
TTTGCTAAGGTTTACTATGCGAGGAATATCAAAACCGGACAGAGTGTTGCCATCAAAGTC
ATAGACAAGGAAAAAGTTGTCAGGGTCGGGCTCATGAATCAGATCAAACGGGAGATATCT
GTTATGAAACTAGTCAGACATCCAAATATTGTGCATCTTTACGAGGTCATGGCGACAAAA
ACCAAGATATACTTTATCATGGAGTATTGTAAAGGAGGTGAGCTCTTTAACAAGGTAGCT
AAGGGAAGGCTAAAAGAGGACGCAGCACGGAAATATTTTCAGCAGTTGATAAATGCTGTA
GATTTCTGCCATAGTAGGGGTGTCTATCACCGGGATTTGAAACCTGAAAACTTGCTGTTA
GATGACGATGAAAACTTAAAAATTTCAGATTTTGGTTTAAGTGCTCTCGTTGAGTCAAAG
CACCAAGACGGACTCCTCCACACGACGTGTGGGACTCCAGCTTATGTTGCTCCAGAGGTG
ATTAACAGAAGAGGCTATGATGGGACTAAGGCTGATATCTGGTCGTGTGGGGTTGTCCTA
TACGTTCTGTTGGCTGGTTATCTTCCATTTCAAGACTCAAATTTGATGGAAATGTATAGG
AAGATTGGGAAAGCTGATTACAAATGTCCGAGTTGGTTTCCACCAGAAGCCCGACGTCTA
CTTTCAAGAATGTTGGATCCTAATCCAAGTTCAAGAATTTCCCTTGCAAAAATTAGAGCA
AGTTCGTGGTTCCGGAGGGGAATTTCAACTTCCTCTAAATCTACAGTAGTAGACGACGTA
AGCACGGATTTAGCTTCAGCAAATAAAGAGGACAAGCAAGAAGTGGCTTCGATTCCAAAG
TTGAATGCTTTTGATATCATTTCCCTTTATGCTAAGTTTGATTTATCCAGATTGTTCGAG
GAACCTTGTTTAAAGAAAGAAACTAAATTCACATCCCGGAAAACTGCATCAGTGATCATA
TCCAAGCTCGAAAATATTGCTAAACATCTGAAGCTGAAAGTTTGCAAAAGGGATGCAGGA
TTACTGAAGTTCGAAGGAACAAAAGAAGGAAAAAAGGGAACTTTGAGCATTGACGTGGAG
ATCTTTGAGGTTGTTGAAGCTTTTCATTTGGTGGAAGTTAAAAAATCAAACGGGGATACA
TTGGAATATCAACAGATATTGAACGAAGGCCTAAGACCGGGTCTTCAAGATATCGTTTGG
ACTTGGCAAGAAGATCAACAGCTGCCTCAGCAGTCGGAAGACCAGCTTCACGAGCAGACA
CCAAATAATCAACTTCAGCAGGAACAACATTTAGATAATCAGCAACAACCTCCGGAGCAG
CAGCAACTGCTACTCCAAAACCATCTGATACAGCAAGAGCATCCACTGAATCCCCTTCAT
CGGAGAAGTCATACTGGGAAAATAGGTAGGCATAATACATACATAAACACCTTTAACTTA
GCCTCAACTTTGAGAAACCTCAACTCCTCTCCGTTGTGTCTCATGGATTGGAGATTAGGT
GAGGTTTCTGGACATGTGCATTTCTCAAAGTTGGATTGTTCAGTTGTCGGTTGAGGCCAA
GTTAAGATGTCTTATCTATGTATATGT

Peptide Sequence

PEP ID

Solyc06g007430.2.1
PEP Infomation

Non-specific serine/threonine protein kinase (AHRD V3.3 *** A0A0V0IRP8_SOLCH)
Sequence

MCLSVSNSKSDHLEALGLVELTIFVLENIDPRCNGHSIIACAKMQSAWSSCTLCVVLIND
NLSKFVCTRKRYIDRFFLMANKGSILMERYEVGRLLGQGTFAKVYYARNIKTGQSVAIKV
IDKEKVVRVGLMNQIKREISVMKLVRHPNIVHLYEVMATKTKIYFIMEYCKGGELFNKVA
KGRLKEDAARKYFQQLINAVDFCHSRGVYHRDLKPENLLLDDDENLKISDFGLSALVESK
HQDGLLHTTCGTPAYVAPEVINRRGYDGTKADIWSCGVVLYVLLAGYLPFQDSNLMEMYR
KIGKADYKCPSWFPPEARRLLSRMLDPNPSSRISLAKIRASSWFRRGISTSSKSTVVDDV
STDLASANKEDKQEVASIPKLNAFDIISLYAKFDLSRLFEEPCLKKETKFTSRKTASVII
SKLENIAKHLKLKVCKRDAGLLKFEGTKEGKKGTLSIDVEIFEVVEAFHLVEVKKSNGDT
LEYQQILNEGLRPGLQDIVWTWQEDQQLPQQSEDQLHEQTPNNQLQQEQHLDNQQQPPEQ
QQLLLQNHLIQQEHPLNPLHRRSHTGKIGRHNTYINTFNLASTLRNLNSSPLCLMDWRLG
EVSGHVHFSKLDCSVVG*GQVKMSYLCIC

Transcript Sequence

Transcript ID

Solyc06g007430.2.1
Transcript Infomation

Non-specific serine/threonine protein kinase (AHRD V3.3 *** A0A0V0IRP8_SOLCH)
Sequence

GTTGCCACTTGTGTTTTTTCCATTGTCTTTCTCAAATTAGGTAATCAAAAAAAGAAAAAA
AAACTTTATTTTCTACAGCTACAAGGGGCTTCTTCTCTCTCCCATTTTGTTTAAAAATCT
GTATTAAAAGGGAGGCGGTGGAAGTTCATTTAGTTGTTTGATTACACACTTTTTCAGCGT
TTTCTAGTGGTAATTGAGAAGAGATAATCCTAGGAATGCTGAAAAATGTGTTTGAGTGTC
TCGAATTCTAAAAGTGATCATCTCGAGGCTTTGGGCTTAGTAGAGCTGACAATTTTCGTT
CTTGAGAACATTGATCCTAGGTGCAACGGCCATAGCATCATTGCTTGCGCCAAGATGCAA
AGTGCATGGAGTAGCTGTACATTGTGTGTTGTGTTAATAAACGATAATTTGTCTAAGTTT
GTATGTACTAGAAAGAGATATATAGATAGATTTTTTTTAATGGCCAATAAAGGAAGCATA
CTGATGGAGCGGTATGAAGTGGGCAGATTATTAGGTCAAGGTACATTTGCTAAGGTTTAC
TATGCGAGGAATATCAAAACCGGACAGAGTGTTGCCATCAAAGTCATAGACAAGGAAAAA
GTTGTCAGGGTCGGGCTCATGAATCAGATCAAACGGGAGATATCTGTTATGAAACTAGTC
AGACATCCAAATATTGTGCATCTTTACGAGGTCATGGCGACAAAAACCAAGATATACTTT
ATCATGGAGTATTGTAAAGGAGGTGAGCTCTTTAACAAGGTAGCTAAGGGAAGGCTAAAA
GAGGACGCAGCACGGAAATATTTTCAGCAGTTGATAAATGCTGTAGATTTCTGCCATAGT
AGGGGTGTCTATCACCGGGATTTGAAACCTGAAAACTTGCTGTTAGATGACGATGAAAAC
TTAAAAATTTCAGATTTTGGTTTAAGTGCTCTCGTTGAGTCAAAGCACCAAGACGGACTC
CTCCACACGACGTGTGGGACTCCAGCTTATGTTGCTCCAGAGGTGATTAACAGAAGAGGC
TATGATGGGACTAAGGCTGATATCTGGTCGTGTGGGGTTGTCCTATACGTTCTGTTGGCT
GGTTATCTTCCATTTCAAGACTCAAATTTGATGGAAATGTATAGGAAGATTGGGAAAGCT
GATTACAAATGTCCGAGTTGGTTTCCACCAGAAGCCCGACGTCTACTTTCAAGAATGTTG
GATCCTAATCCAAGTTCAAGAATTTCCCTTGCAAAAATTAGAGCAAGTTCGTGGTTCCGG
AGGGGAATTTCAACTTCCTCTAAATCTACAGTAGTAGACGACGTAAGCACGGATTTAGCT
TCAGCAAATAAAGAGGACAAGCAAGAAGTGGCTTCGATTCCAAAGTTGAATGCTTTTGAT
ATCATTTCCCTTTATGCTAAGTTTGATTTATCCAGATTGTTCGAGGAACCTTGTTTAAAG
AAAGAAACTAAATTCACATCCCGGAAAACTGCATCAGTGATCATATCCAAGCTCGAAAAT
ATTGCTAAACATCTGAAGCTGAAAGTTTGCAAAAGGGATGCAGGATTACTGAAGTTCGAA
GGAACAAAAGAAGGAAAAAAGGGAACTTTGAGCATTGACGTGGAGATCTTTGAGGTTGTT
GAAGCTTTTCATTTGGTGGAAGTTAAAAAATCAAACGGGGATACATTGGAATATCAACAG
ATATTGAACGAAGGCCTAAGACCGGGTCTTCAAGATATCGTTTGGACTTGGCAAGAAGAT
CAACAGCTGCCTCAGCAGTCGGAAGACCAGCTTCACGAGCAGACACCAAATAATCAACTT
CAGCAGGAACAACATTTAGATAATCAGCAACAACCTCCGGAGCAGCAGCAACTGCTACTC
CAAAACCATCTGATACAGCAAGAGCATCCACTGAATCCCCTTCATCGGAGAAGTCATACT
GGGAAAATAGGTAGGCATAATACATACATAAACACCTTTAACTTAGCCTCAACTTTGAGA
AACCTCAACTCCTCTCCGTTGTGTCTCATGGATTGGAGATTAGGTGAGGTTTCTGGACAT
GTGCATTTCTCAAAGTTGGATTGTTCAGTTGTCGGTTGAGGCCAAGTTAAGATGTCTTAT
CTATGTATATGT