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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g007250.3.1
CDS Infomation

Leucine-rich repeat containing protein, putative (AHRD V3.3 *** B9SKU7_RICCO)
Sequence

ATGGAGAAAGAGGGAAAAAGCGATGCCGGTAATCGTACTATCACAGTGAATGTTAGGTTC
AGCGGTCGATCGATACCGGTGGAAATCTCCGACGAGTCCACTGTCAAACACCTCAAGTCT
CTCCTTCAACCACTCACAAATGTCCTCTCTCGCGGCCAAAAACTCATCTTCAAAGGGAAA
GTTTTGGTGGATGAAGTGACATTGAAGTCATCGGAGGTCGGAAATGGTGCGAAGATCATG
CTTATGGCTTCCCAGGGCTTACATCAAGGGGATGGACCAATAAGAAAGGAAGCTTCCAAC
TTTCCCACAGCGAGGAGGATGCCTGAAGCTATGAGACCTAAAAGGGATGTTCCTCAAGTT
CCTGTTGTGAAGAGCCAACTTGAACGGTGGAAGGCCACCGGGGTTGTTGCATTATCAGAA
TGCAATCTGAAGGTCCTGCCTGATGAAGTGTTGAACTGCGGACCTTCCGCTAGAGTCCTT
GATCTCAGCCACAACGCCATACAGCATCTTCCAGCCACAATTAATAGCTTGAGTTCTCTT
CAGAAATTGATACTCAATGGGAATGAAATTATGGATAATTCCTTAAGCTGGGAAGAGCTA
GCTTCTCTAAAGAGTCTAATGGTTATTTCACTGAACCAAAACCAATGTCGTTTTGTGTTA
CAATTTTATTTTCTGATACACCTTACTCTGTTTACCAACCTCAATCATTTATCATATGCC
ATTATTTCGTATAAAGGTTTCTTGTATGACTGTATCAAGTGGTCTTCTTTGGTATGCAGC
ATAGCAACACTGCCTCCTGAGGTCGGCACTTTAACCAGTCTGAAACAACTTCATATTGCA
CATAACGAGTTAACAGGTCTCCCATCTGAGATAGGTCTGCTGACCAGCCTTGAGGTTCTG
AAAGTTAACAACAACAGGATACACTCTATTCCGGAAAGTATAGGGGATTGTGTTTCTCTT
ATTGAGGTTGATCTTTCATCTAATCTTTTGGTAGAGCTGCCAGAAACAATTAGCAAAATA
AAGGACTTAAAGGCACTTTATCTTAGGAACAACGGGCTCAAATCCCTTCCTAGCAGCATT
TTTAAACAGTGCTGTCAACTCTCTACACTAGATCTCCATGGAACTGAAATAACTATAGAT
GTTATCAGCCAGATTGAAGGATGGGAGAACTTTGATGAGAGAAGACGCTCGAAGCATCAG
AAACAACTGGACTTCAGAGTGAGCAGCTCTGGCAAATTTGACGAAGGAGCTGATCAAAGC
TGA

Peptide Sequence

PEP ID

Solyc06g007250.3.1
PEP Infomation

Leucine-rich repeat containing protein, putative (AHRD V3.3 *** B9SKU7_RICCO)
Sequence

MEKEGKSDAGNRTITVNVRFSGRSIPVEISDESTVKHLKSLLQPLTNVLSRGQKLIFKGK
VLVDEVTLKSSEVGNGAKIMLMASQGLHQGDGPIRKEASNFPTARRMPEAMRPKRDVPQV
PVVKSQLERWKATGVVALSECNLKVLPDEVLNCGPSARVLDLSHNAIQHLPATINSLSSL
QKLILNGNEIMDNSLSWEELASLKSLMVISLNQNQCRFVLQFYFLIHLTLFTNLNHLSYA
IISYKGFLYDCIKWSSLVCSIATLPPEVGTLTSLKQLHIAHNELTGLPSEIGLLTSLEVL
KVNNNRIHSIPESIGDCVSLIEVDLSSNLLVELPETISKIKDLKALYLRNNGLKSLPSSI
FKQCCQLSTLDLHGTEITIDVISQIEGWENFDERRRSKHQKQLDFRVSSSGKFDEGADQS
*

Transcript Sequence

Transcript ID

Solyc06g007250.3.1
Transcript Infomation

Leucine-rich repeat containing protein, putative (AHRD V3.3 *** B9SKU7_RICCO)
Sequence

ATATAAATATTAGTTAAGACCAAACTAAATTACATTTTTATTTATAATTTCTTAATATAT
TATAGTAAAAAAGAAATTTGCTGGTATTTACATTTCACGAAGGAATGATAAATAATTTCG
TATCAATAGGAATGATTTTTGTTTGAATTCAGACATCGGCGGCGAGTAAAGAGAAATGGA
GAAAGAGGGAAAAAGCGATGCCGGTAATCGTACTATCACAGTGAATGTTAGGTTCAGCGG
TCGATCGATACCGGTGGAAATCTCCGACGAGTCCACTGTCAAACACCTCAAGTCTCTCCT
TCAACCACTCACAAATGTCCTCTCTCGCGGCCAAAAACTCATCTTCAAAGGGAAAGTTTT
GGTGGATGAAGTGACATTGAAGTCATCGGAGGTCGGAAATGGTGCGAAGATCATGCTTAT
GGCTTCCCAGGGCTTACATCAAGGGGATGGACCAATAAGAAAGGAAGCTTCCAACTTTCC
CACAGCGAGGAGGATGCCTGAAGCTATGAGACCTAAAAGGGATGTTCCTCAAGTTCCTGT
TGTGAAGAGCCAACTTGAACGGTGGAAGGCCACCGGGGTTGTTGCATTATCAGAATGCAA
TCTGAAGGTCCTGCCTGATGAAGTGTTGAACTGCGGACCTTCCGCTAGAGTCCTTGATCT
CAGCCACAACGCCATACAGCATCTTCCAGCCACAATTAATAGCTTGAGTTCTCTTCAGAA
ATTGATACTCAATGGGAATGAAATTATGGATAATTCCTTAAGCTGGGAAGAGCTAGCTTC
TCTAAAGAGTCTAATGGTTATTTCACTGAACCAAAACCAATGTCGTTTTGTGTTACAATT
TTATTTTCTGATACACCTTACTCTGTTTACCAACCTCAATCATTTATCATATGCCATTAT
TTCGTATAAAGGTTTCTTGTATGACTGTATCAAGTGGTCTTCTTTGGTATGCAGCATAGC
AACACTGCCTCCTGAGGTCGGCACTTTAACCAGTCTGAAACAACTTCATATTGCACATAA
CGAGTTAACAGGTCTCCCATCTGAGATAGGTCTGCTGACCAGCCTTGAGGTTCTGAAAGT
TAACAACAACAGGATACACTCTATTCCGGAAAGTATAGGGGATTGTGTTTCTCTTATTGA
GGTTGATCTTTCATCTAATCTTTTGGTAGAGCTGCCAGAAACAATTAGCAAAATAAAGGA
CTTAAAGGCACTTTATCTTAGGAACAACGGGCTCAAATCCCTTCCTAGCAGCATTTTTAA
ACAGTGCTGTCAACTCTCTACACTAGATCTCCATGGAACTGAAATAACTATAGATGTTAT
CAGCCAGATTGAAGGATGGGAGAACTTTGATGAGAGAAGACGCTCGAAGCATCAGAAACA
ACTGGACTTCAGAGTGAGCAGCTCTGGCAAATTTGACGAAGGAGCTGATCAAAGCTGATA
AGGTCTGATACAAATTGCTCGGTAACTCGGTCTTATATACATCCTGACATACATTTGCAT
AGTGATCCCTTGCAAACTTTACATAAGAATCTTGTAGTACCTGTTAAGATACATCAAGAA
ATTATAATGAGCATACTGCTCCTCTATGCACTCCCTAAAGATGATTACATTTTCTGAAGG
CTTACTGTAAAGCTTTCCGCATCTGCTCACTGTTACATATATAGTTGAATGAAAATTCCC
TTTTGAGGATACATATTACAAA