Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g007120.3.1
CDS Infomation

PI-phospholipase C4
Sequence

ATGGGGAATTATAGGGTATGTGTGTGTTTCTCACGAAAATTCAAGGTAACAGAGGCAGAG
CCACCAACAGATGTGAAAGAGGCATTTAAGAAATATGGTGATGGTGGGAACCAGATGAGT
GCAGAACAGTTGCTGAAGTTCTTGATTGAAGTTCAGGGAGAGACCCAATTGACTGTTGCT
GATGCTGATGCTGTTGTTAGACAGATCCTTCAGAAAAGACACCCCATTACTAAGTTAGCT
CGCCAGGCTCTTGCTCTTGATGATTTTCATCACTACCTTTTCTCTGCTGACCTTAATCCC
CCAATCAATTCCAAGGTTGACCATGATATGAATGCGCCACTGTCTCATTATTTTATATTC
ACTGGACACAATTCTTACTTGACGGGGAATCAGCTGACGAGTGACTGCAGTGATGTCCCA
ATTATAAAGGCACTGAAAAAAGGTGTGAGGGTGATAGAGCTTGATATATGGCCAAACTCC
GACAAGGATGACGTACATGTACTTCATGGAAGGACAGTGACAACCCCTGTGGAATTAATA
AGATGTCTCAAGTCAATAAAAGAACATGCATTCTCTGCTTCTCCTTACCCTGTTGTAATA
ACACTGGAAGATCATCTAACGCCTGATCTTCAAGCTAAAGTGGCTCAGATGCTTACTGAA
ACATTTGGAGAAATGCTCTTTGTTCCTGAATCTGATAGTCTAAAGGAGTGCCCTTCACCA
GAAGAACTAAAGCATCGTATTATTATTTCAACCAAACCTCCAAAAGAGTACCTTGAAGCC
AGTGCTAGTGTTTGTAAAGACAGACGAAATAGCTCTCAGAGGTCAAAGGATTCCGAGGAT
GATGTATGGGGTTCCGAGCCTTCTAGCTTGACAGCTGATCAAGAAGAAAATGAAAAGAGC
GATAGTGATAAAAGTTATGAAGATGACGATGACGCCACTCACAGAGGACATGTGGCATCT
GCTTATAAACGCCTTATTGCCATCCATGCTGGCAAACCTAAAGGTGGGTTAAAGGAGGCA
TTGAAAATCGATCCTGATAAAGTAAGACGCCTAAGTTTAAGTGAACAGGCTCTTGAAAAG
GCTGCTGAATCTCATGGAACCGATATTGTGAGGTTCACGCAAAGAAACATTCTAAGGGTG
TACCCCAAAGGTACTAGATTTAACTCCTCCAACTACAAGCCACTAATAGGTTGGATGCAT
GGAGCTCAGATGGTTGCATTTAACATGCAGGGGTACGGTAGAGCACTATGGTTAATGCAT
GGGATGTTCAGGGCAAATGGAGGCTGTGGTTATGTTAAAAAGCCTGATTTCTTACTGAGT
ATTGGTCCTAATAATGAAGTTTTTGATCCTAAAGCAAAGTTGCCAGTTAAGAAAACCTTA
AAGGTGAAAGTATATATGGGAGATGGATGGCATTTAGATTTTAAGCAAACTCACTTTGAT
TTGTATTCGCCTCCGGATTTCTACACAAGGGTCGGGATAGCTGGAGTACCTGCTGATGAG
GTAATGAAGAAAACAAAGACTAAAGAGGACAAATGGACGCCTGTTTGGGATGAAGAATTT
ACCTTCCCACTGACTGTACCCGAATTAGCTTTGCTACGAATTGAAGTACATGAATACGAC
ATGTCAGAGAAGGACGATTTTGCTGGCCAAACATGTATACCTGTTTCGGAGCTGAAACCT
GGTATACATGCAGTTCCACTCTGTAACAGAAAAGGTGAGATATATAATTCCGCGAGGCTA
CTCATGCGCTTTGAGTTTATCTGA

Peptide Sequence

PEP ID

Solyc06g007120.3.1
PEP Infomation

PI-phospholipase C4
Sequence

MGNYRVCVCFSRKFKVTEAEPPTDVKEAFKKYGDGGNQMSAEQLLKFLIEVQGETQLTVA
DADAVVRQILQKRHPITKLARQALALDDFHHYLFSADLNPPINSKVDHDMNAPLSHYFIF
TGHNSYLTGNQLTSDCSDVPIIKALKKGVRVIELDIWPNSDKDDVHVLHGRTVTTPVELI
RCLKSIKEHAFSASPYPVVITLEDHLTPDLQAKVAQMLTETFGEMLFVPESDSLKECPSP
EELKHRIIISTKPPKEYLEASASVCKDRRNSSQRSKDSEDDVWGSEPSSLTADQEENEKS
DSDKSYEDDDDATHRGHVASAYKRLIAIHAGKPKGGLKEALKIDPDKVRRLSLSEQALEK
AAESHGTDIVRFTQRNILRVYPKGTRFNSSNYKPLIGWMHGAQMVAFNMQGYGRALWLMH
GMFRANGGCGYVKKPDFLLSIGPNNEVFDPKAKLPVKKTLKVKVYMGDGWHLDFKQTHFD
LYSPPDFYTRVGIAGVPADEVMKKTKTKEDKWTPVWDEEFTFPLTVPELALLRIEVHEYD
MSEKDDFAGQTCIPVSELKPGIHAVPLCNRKGEIYNSARLLMRFEFI*

Transcript Sequence

Transcript ID

Solyc06g007120.3.1
Transcript Infomation

PI-phospholipase C4
Sequence

TGTATATGTGAATGGGGTATATACTTTAATGCCAAAAATCCAACAGAGTATACATCTGTC
TTCTTCCAAACCTAAAACCCCAAAAAGAAAATCCAATTGCCAGCAAAAAGCTCCACTTAG
TCACCTGTTCATTGACCTATCCATTCATATTATATATATATATATACATATATAATATTA
TATATATATGTACACACCTATATCAACACCAGTTTCTTTCATATACCCAATTAAAAACTA
AAAAGTTAAAGACTTGTGGATCCAAGAATTTACACTAATTAGCTGAAAAAGATTGCAACT
TTGGAGTATCCCTAGAACCCCATTAGTGTGCTCTTTCTATTTTTTGTGTTGTAACTGAAA
AATTAGAACTTTGTGGGTATTTCAAGAACCCCATTAATCTCAGATTTTTGTGTTTTAACT
GAAAAATGGGGAATTATAGGGTATGTGTGTGTTTCTCACGAAAATTCAAGGTAACAGAGG
CAGAGCCACCAACAGATGTGAAAGAGGCATTTAAGAAATATGGTGATGGTGGGAACCAGA
TGAGTGCAGAACAGTTGCTGAAGTTCTTGATTGAAGTTCAGGGAGAGACCCAATTGACTG
TTGCTGATGCTGATGCTGTTGTTAGACAGATCCTTCAGAAAAGACACCCCATTACTAAGT
TAGCTCGCCAGGCTCTTGCTCTTGATGATTTTCATCACTACCTTTTCTCTGCTGACCTTA
ATCCCCCAATCAATTCCAAGGTTGACCATGATATGAATGCGCCACTGTCTCATTATTTTA
TATTCACTGGACACAATTCTTACTTGACGGGGAATCAGCTGACGAGTGACTGCAGTGATG
TCCCAATTATAAAGGCACTGAAAAAAGGTGTGAGGGTGATAGAGCTTGATATATGGCCAA
ACTCCGACAAGGATGACGTACATGTACTTCATGGAAGGACAGTGACAACCCCTGTGGAAT
TAATAAGATGTCTCAAGTCAATAAAAGAACATGCATTCTCTGCTTCTCCTTACCCTGTTG
TAATAACACTGGAAGATCATCTAACGCCTGATCTTCAAGCTAAAGTGGCTCAGATGCTTA
CTGAAACATTTGGAGAAATGCTCTTTGTTCCTGAATCTGATAGTCTAAAGGAGTGCCCTT
CACCAGAAGAACTAAAGCATCGTATTATTATTTCAACCAAACCTCCAAAAGAGTACCTTG
AAGCCAGTGCTAGTGTTTGTAAAGACAGACGAAATAGCTCTCAGAGGTCAAAGGATTCCG
AGGATGATGTATGGGGTTCCGAGCCTTCTAGCTTGACAGCTGATCAAGAAGAAAATGAAA
AGAGCGATAGTGATAAAAGTTATGAAGATGACGATGACGCCACTCACAGAGGACATGTGG
CATCTGCTTATAAACGCCTTATTGCCATCCATGCTGGCAAACCTAAAGGTGGGTTAAAGG
AGGCATTGAAAATCGATCCTGATAAAGTAAGACGCCTAAGTTTAAGTGAACAGGCTCTTG
AAAAGGCTGCTGAATCTCATGGAACCGATATTGTGAGGTTCACGCAAAGAAACATTCTAA
GGGTGTACCCCAAAGGTACTAGATTTAACTCCTCCAACTACAAGCCACTAATAGGTTGGA
TGCATGGAGCTCAGATGGTTGCATTTAACATGCAGGGGTACGGTAGAGCACTATGGTTAA
TGCATGGGATGTTCAGGGCAAATGGAGGCTGTGGTTATGTTAAAAAGCCTGATTTCTTAC
TGAGTATTGGTCCTAATAATGAAGTTTTTGATCCTAAAGCAAAGTTGCCAGTTAAGAAAA
CCTTAAAGGTGAAAGTATATATGGGAGATGGATGGCATTTAGATTTTAAGCAAACTCACT
TTGATTTGTATTCGCCTCCGGATTTCTACACAAGGGTCGGGATAGCTGGAGTACCTGCTG
ATGAGGTAATGAAGAAAACAAAGACTAAAGAGGACAAATGGACGCCTGTTTGGGATGAAG
AATTTACCTTCCCACTGACTGTACCCGAATTAGCTTTGCTACGAATTGAAGTACATGAAT
ACGACATGTCAGAGAAGGACGATTTTGCTGGCCAAACATGTATACCTGTTTCGGAGCTGA
AACCTGGTATACATGCAGTTCCACTCTGTAACAGAAAAGGTGAGATATATAATTCCGCGA
GGCTACTCATGCGCTTTGAGTTTATCTGAGGTTTTTTTTAATTGTTGTGTGCTTCTTGAG
CTTTCGTATTTTTGGATGTCCTCAGATGATGTTTGTTTACATTTTAGGAGTTTGTAATAA
TGTCACTAAGCTCTCTCCTTGTGGATGAAACTTGTGTTGCAAAAGATCATTTCCATTTTA
GGCTTTGTAGTTTGTACAGTATATACTCTACAAGTAAACTAGATTTTTCAAGTTCCATTT
TGTGTTGTGATTGTTGTTGAATCTTTGTGAATTACAAGTCTTTTTCTGATGAGTCGATTC
GGGTTTGAAATCGATATTTTGTAGTCGAT