Plant GARDEN
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g006080.3.1
CDS Infomation

thiamine biosynthesis protein ThiC
Sequence

ATGGCGTCTGTCCAAACTGCTTTGACATCACTCCTATGCAAGAAAGGGAACAATAATCCA
CAAGTAAATGTTCCAAGAAGTTCCTTCTTGCCAGGGTTTGATTTGACAGGGCAAGTTGCG
GTTACAGGGAGAAGGGAAACGCGTTTCAATTCTTTTTCAAGCCCGAGAGCAACACTTACC
TTTGATCCTCCCAGTACTGATAATAAAGAGAAGACAAAGCCAAAGCACACTGTTGATCCT
AATGCTCCTGATTTCCTGCCCCTTCCACCATTCGAACAATGCTTTCCGAAAAGCTCCAAG
GAATACAGTGAAGTTATGCATGAAGAAACTGGTCATGTACTCAAAGTCCCATTTCGACGT
ATCCATCTTTCCGGGGATGAACCACATTTCGACACTTATGATACCAGTGGTCCTCAGGGT
GTTAACCCGCGCGTTGGACTTCCCAAGCTGCGCACGGAGTGGATTAACAGGAGGGAGAAG
TTAGGAGGACCAAGGTATACTCAAATGTTCTATGCTAAGCAGGGAATCATAACTGAGGAA
ATGGTGTACTGTGCTGCTCGTGAGAAGATGGATCCGGAATTTGTGAGGTCAGAAGTTGCT
CGGGGCCGTGCAATCATCCCTTCAAACAAGAAGCACCCTGAGTTGGAGCCAATGATAGTA
GGAAGAAAGTTCTTAGTGAAAGTCAATGCCAACATCGGGAACTCTGCTGTTGTAAGCTCG
ATTGAAGAAGAAGTTCACAAGCTTCAATGGGCAACAATGTGGGGTGCAGATACGATTATG
GATCTCTCTACTGGTCGTCACATCCACGAGACTCGTGAGTGGATCTTGCGTAATTCTGCT
GTACCAGTAGGCACTGTGCCAATTTACCAAGCACTAGAAAAAGTAAACGGGATTGCTGAG
AATCTTAGTTGGGAAGTGTTTAGGGAGACCTTAATTGAACAAGCTGAGCAAGGAGTTGAT
TACTTCACAATCCATGCCGGAGTCCTTCTCAGGTACATCCCACTGACAGCAAAACGGATG
ACCGGAATTGTTTCTCGTGGAGGCTCAATTCATGCAAAGTGGTGCTTAGCTTATCACAAG
GAGAATTTCGCTTATGAACATTGGGATGACATACTTGACATCTGTAATCAGTACGATATA
TCGTTATCAATTGGTGATGGACTGAGACCTGGTTCAATTTATGATGCAAATGACACCGCT
CAGTTTGCTGAGCTCTTGACTCAAGGGGAGCTGACTCGCCGAGCTTGGGAAAAGGATGTA
CAGGTTATGAATGAAGGACCTGGACATGTACCAATGCATAAGATTCCCGAGAACATGCAG
AAACAGCTAGAGTGGTGTAATGAAGCACCATTTTACACTCTTGGACCATTGACAACTGAT
ATAGCTCCCGGATATGATCATATCACCTCAGCTATCGGTGCAGCCAATATAGGAGCACTC
GGGACTGCACTTCTGTGTTACGTCACTCCAAAAGAGCATCTTGGTCTGCCTAATCGCGAT
GACGTGAAGACAGGTGTAATATCATATAAGATAGCTGCTCATGCAGCTGATCTTGCAAAA
GGTCACCCGCTATCTCAAGCCTGGGATGATGCACTTAGCAAGGCAAGATTTGAGTTCAGA
TGGATGGACCAATTCGCTTTATCATTGGACCCCGTTACTGCAATGTCCTTTCACGACGAA
ACTTTACCAGCCGATGGGGCTAAAGTGGCACATTTCTGCTCTATGTGCGGGCCTAAGTTT
TGCTCCATGAAAATAACCGAAGATATAAGAAAGTATGCTGAAAATCATGGTTATGGAAAT
GCAGAGGAAGCCATTCAGCAGGGCATGGATGCTATGAGTGCAGCGTTTCAAGCTGCAAAA
AAAACCATTAGTGGGGAACAACACGGTGAGGTTGGCGGTGAGATCTACTTGCCAGAGAAT
TACATCAACTCTTTGAAGAGCCAAAGGAATGTGTAA

Peptide Sequence

PEP ID

Solyc06g006080.3.1
PEP Infomation

thiamine biosynthesis protein ThiC
Sequence

MASVQTALTSLLCKKGNNNPQVNVPRSSFLPGFDLTGQVAVTGRRETRFNSFSSPRATLT
FDPPSTDNKEKTKPKHTVDPNAPDFLPLPPFEQCFPKSSKEYSEVMHEETGHVLKVPFRR
IHLSGDEPHFDTYDTSGPQGVNPRVGLPKLRTEWINRREKLGGPRYTQMFYAKQGIITEE
MVYCAAREKMDPEFVRSEVARGRAIIPSNKKHPELEPMIVGRKFLVKVNANIGNSAVVSS
IEEEVHKLQWATMWGADTIMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVNGIAE
NLSWEVFRETLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHK
ENFAYEHWDDILDICNQYDISLSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWEKDV
QVMNEGPGHVPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGAL
GTALLCYVTPKEHLGLPNRDDVKTGVISYKIAAHAADLAKGHPLSQAWDDALSKARFEFR
WMDQFALSLDPVTAMSFHDETLPADGAKVAHFCSMCGPKFCSMKITEDIRKYAENHGYGN
AEEAIQQGMDAMSAAFQAAKKTISGEQHGEVGGEIYLPENYINSLKSQRNV*

Transcript Sequence

Transcript ID

Solyc06g006080.3.1
Transcript Infomation

thiamine biosynthesis protein ThiC
Sequence

AAAAAATCTAAGTAGAGGTGGGGCCCAATTAGTAAGCTGAGTGGAGTGAAAAAAATATCC
CTATAAATTAAGCACAACCAGGAGATATTGGCAATATCGTCACTCATATTTTTCTCCCTC
TTCTCATCATTTACAGCTCTAATTCATTTGCTTCAGCCTTAGACGTTGATTGGAAGATGG
CGTCTGTCCAAACTGCTTTGACATCACTCCTATGCAAGAAAGGGAACAATAATCCACAAG
TAAATGTTCCAAGAAGTTCCTTCTTGCCAGGGTTTGATTTGACAGGGCAAGTTGCGGTTA
CAGGGAGAAGGGAAACGCGTTTCAATTCTTTTTCAAGCCCGAGAGCAACACTTACCTTTG
ATCCTCCCAGTACTGATAATAAAGAGAAGACAAAGCCAAAGCACACTGTTGATCCTAATG
CTCCTGATTTCCTGCCCCTTCCACCATTCGAACAATGCTTTCCGAAAAGCTCCAAGGAAT
ACAGTGAAGTTATGCATGAAGAAACTGGTCATGTACTCAAAGTCCCATTTCGACGTATCC
ATCTTTCCGGGGATGAACCACATTTCGACACTTATGATACCAGTGGTCCTCAGGGTGTTA
ACCCGCGCGTTGGACTTCCCAAGCTGCGCACGGAGTGGATTAACAGGAGGGAGAAGTTAG
GAGGACCAAGGTATACTCAAATGTTCTATGCTAAGCAGGGAATCATAACTGAGGAAATGG
TGTACTGTGCTGCTCGTGAGAAGATGGATCCGGAATTTGTGAGGTCAGAAGTTGCTCGGG
GCCGTGCAATCATCCCTTCAAACAAGAAGCACCCTGAGTTGGAGCCAATGATAGTAGGAA
GAAAGTTCTTAGTGAAAGTCAATGCCAACATCGGGAACTCTGCTGTTGTAAGCTCGATTG
AAGAAGAAGTTCACAAGCTTCAATGGGCAACAATGTGGGGTGCAGATACGATTATGGATC
TCTCTACTGGTCGTCACATCCACGAGACTCGTGAGTGGATCTTGCGTAATTCTGCTGTAC
CAGTAGGCACTGTGCCAATTTACCAAGCACTAGAAAAAGTAAACGGGATTGCTGAGAATC
TTAGTTGGGAAGTGTTTAGGGAGACCTTAATTGAACAAGCTGAGCAAGGAGTTGATTACT
TCACAATCCATGCCGGAGTCCTTCTCAGGTACATCCCACTGACAGCAAAACGGATGACCG
GAATTGTTTCTCGTGGAGGCTCAATTCATGCAAAGTGGTGCTTAGCTTATCACAAGGAGA
ATTTCGCTTATGAACATTGGGATGACATACTTGACATCTGTAATCAGTACGATATATCGT
TATCAATTGGTGATGGACTGAGACCTGGTTCAATTTATGATGCAAATGACACCGCTCAGT
TTGCTGAGCTCTTGACTCAAGGGGAGCTGACTCGCCGAGCTTGGGAAAAGGATGTACAGG
TTATGAATGAAGGACCTGGACATGTACCAATGCATAAGATTCCCGAGAACATGCAGAAAC
AGCTAGAGTGGTGTAATGAAGCACCATTTTACACTCTTGGACCATTGACAACTGATATAG
CTCCCGGATATGATCATATCACCTCAGCTATCGGTGCAGCCAATATAGGAGCACTCGGGA
CTGCACTTCTGTGTTACGTCACTCCAAAAGAGCATCTTGGTCTGCCTAATCGCGATGACG
TGAAGACAGGTGTAATATCATATAAGATAGCTGCTCATGCAGCTGATCTTGCAAAAGGTC
ACCCGCTATCTCAAGCCTGGGATGATGCACTTAGCAAGGCAAGATTTGAGTTCAGATGGA
TGGACCAATTCGCTTTATCATTGGACCCCGTTACTGCAATGTCCTTTCACGACGAAACTT
TACCAGCCGATGGGGCTAAAGTGGCACATTTCTGCTCTATGTGCGGGCCTAAGTTTTGCT
CCATGAAAATAACCGAAGATATAAGAAAGTATGCTGAAAATCATGGTTATGGAAATGCAG
AGGAAGCCATTCAGCAGGGCATGGATGCTATGAGTGCAGCGTTTCAAGCTGCAAAAAAAA
CCATTAGTGGGGAACAACACGGTGAGGTTGGCGGTGAGATCTACTTGCCAGAGAATTACA
TCAACTCTTTGAAGAGCCAAAGGAATGTGTAAAGATCGAAAACTGGCTCACAGATTTCTG
AAGTGATCACAACTCCATCGGCCAGTCAAGGAGGCGGTAGTAGGAGCCTCATTATCAAGT
GTTAGGTAAGTATCTAGTTTGGTACTGTTAAATAAACTGAGACAACAGCCTTGTTCAATG
AAACTCTCCTTTGTTAGTAATGAGAAAAACGCGTATTTTCTTGTCTTCAAATGCTGACTG
ATCAGGCTGAGAAAGTCCCTTTGAACCTGAACGGGATAATTCCTGCGTAGGGAGCGTGCA
ATTTCTTTTTTCTTGCTTGCACAGGGATGGCGATTCTCCAAAATGGTTGAAAATTCAAAA
TTAATCTGATCCTGCTCTTTGCCAGGACCAGTTTATTCACTGTCTATTCAAGACACCATC
TTGTATTGTTTGTTTTTTTGGTGTCCTGTACCGCATTGAGGCCTGACTAAATACAGATTC
CCGCAC