Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc06g005990.3.1
CDS Infomation	Helicase, putative (AHRD V3.3 *** B9S370_RICCO)
Sequence	ATGGATCGGTTAGTAGCAGCAAAGGAGCTATCTTTTCGAATAGGGTTTACTGGACACAGT GGTCACCTCACGATCGAGCCTCTCCCTCCTGTTGAACGCGATACTCCTCTCAATTCTATT CCTGACTTCATTTTGCCACCTGCATTTCCAAAGGAAACACCTGATACAATAAAGGAATAT ATTAGGGAGAAGTATCTATTGCCTCAGCTAGATGCAGACGAGTTTTCTCCCGAAAAAGTT GGAAGGCAGTGGGAGTTTGATTGGTTTGAGAGAGCTAAAATCCTTCCAGATCCATCTTTG CCTCGATCTGTTGTTGTCCCTACATGGGAAGTGCCTTTTAGACGTCAGCGGGACAGATTG GATAATGGAAGATGGGAACCAAAGTCAGAGGAGAGAGATGTATCAGAACTTACAATTGGA GCTGATGATTCTGGGGCTCTACCGCGCATTGTTGGACCACCAAAAGATTTTGTTAGAGGA AGCATTAACAGTCGTCCATTTCGACCTGGTGGCTTGGATGATTCCCCTTCGTTGGGCAGA GTTGTTCCTGATGGTGCTACAAACGGTGAATGGGTAAGGGAGGTTCTTAATGGCGGTCCT GCCCAAACCGCTCCTCCAAGCTTTAAGCAAGGACCTGATCTTGGCGATCTTAAGGATACA CATTCATGCTCTTGGAATATATATGAGGATCAGAGTGCTGCTACGAACACAGTGGAGGTG AAACTGAGTGACTTATCCGTGCAGTTTGATGACTTGTTCAAGAAAGCTTGGCAAGAGGAT GTCACAGAGTTTGTTGGAGATGGTCATACGTCTGAATTGCAATCTGAAGCGGAACAATTG CCATCTGTGAAGCCAGAGCTACTTCAGGTTGAAGCTGAAGTAAACAAGTCTGAAGTGGCT GACAAGGGTCTAGACACTGAGATATCTGTCTTGGATGAGATTTTGTCCGTTGAAGCAGAA GGATCAATATCAAGATTGGATGTGGATAATGATGGTGCACGTCAAGAGAATGACGGATGG GCTGTTACTGGTGGCGGTGAAGTAATTGTAGAACGATTTCATGATCTCATCCCTGATATG GCTCTTACTTTCCCATTTGAACTCGACCCCTTTCAAAAGGAGGCCATCTATCATCTTGAA AAAGGGAACTCTGTCTTTGTTGCTGCTCATACATCTGCTGGGAAGACTGTTGTGGCTGAA TATGCATTTGCTTTGGCAGCTAAACATTGTACCAGGGCTGTATATACAGCTCCAATCAAA ACAATCAGCAATCAGAAATACAGGGATTTTTGTGGGAAGTTTGATGTTGGCCTTCTCACA GGTGATATAAGCATAAGACCTGAGGCCTCTTGTCTTATAATGACCACTGAGATATTAAGG TCAATGCTTTATAGAGGGGCTGATATGATTCGGGATATAGAATGGGTTATATTTGATGAA GTGCATTATGTCAATGATGTTGAAAGAGGTGTTGTTTGGGAAGAAGTTATCATTATGCTC CCAAGACATATCAACTTTGTCCTCCTTTCAGCTACGGTACCCAACACAATTGAATTTGCA GACTGGATTGGTCGTACAAAACAAAAGCAAATTCGTGTTACTGGGACGACCAAAAGACCT GTCCCTTTGGAACATTGTCTCTTCTATTCTGGGGAGCTTTACAAAGTGTGTGAGAATGAA GAGTTTCTGCCTCATGGATTTAGAGCAGCCAAAGATGTACATAAGAAGAAGACCACAAGT TCTGTCTCTGGCGGCGCCGGCTTGCGTCCTGGGTCTTCAACAGCTGCTGATAAGGGTCGA GGGCAGAGGCGTGATAGCTCTTCTCAGGCAAAGCAGCACAAGCATTCTGGTCCCCAAAGA TTGGGGAATTTTGGTGGTGGTTGGGGAACGCAAAGCACTGGGCCTGGACAGAATGTTATG GGGTTTAGGAGATCAGAGGCGTCTTTGTGGTTGACGCTGATTAATAAACTCTTGAAGAAA TCACTGTTACCTGTGGTTATATTTTGTTTTTCGAAGAATCGATGTGACAAATCAGCTGAT AACATCCCTGGTACCGATCTCACAAGTAGCTCTGAGAAAAGTGAAATTAGGATATTCTGT GATAAAGCATTTTCGCGGCTTAAGGGATCCGACAGAAACTTACCGCAGATTGTCAGAATT CAAAGCCTTCTCCACAGGGGCATTGCTGTGCATCATGCAGGGCTCCTCCCAATTGTCAAG GAAGTTGTAGAAATGCTTTTTTGTCGAGGTTTGGTTAAGGTTCTGTTCTCGACAGAGACT TTTGCAATGGGAGTTAATGCTCCAGCCAGGACGGTTGTTTTTGATTCTTTAAGAAAGTTT GATGGCAAGGAATTTAGGCAGCTACTTCCCGGAGAGTACACTCAGATGGCTGGGCGTGCT GGAAGGAGAGGACTTGATAAGACTGGTACAGTTGTGGTGATGTGCCGAGATGAGATCCCT TTTGAAAATGATTTGAAGCATGTAATAGTTGGTACTGCGACTAGGCTTGAATCTCAGTTT CGACTGACCTACATCATGATTTTGCATCTACTTCGGGTTGAAGAACTGAAGGTTGAGGAC ATGCTGAAAAGAAGTTTTGCTGAATTTCATGCTCAGAAAAAACTACCTGAGCAACAACAA CTCTTGATGCGAAAGCTTGCTCAGCCTACAAAATCTGTTGAATGCATAAAGGGTGAACCA GCAATTGAGGAATACTATGACATGTATTTGGAGGCAGAGAAATATAGCCACCAAATAGCA GAAGCAGTAATGCAGTCGCCAGCTTCTCAGCAGTACCTTAGTCTTGGGAGAGCAGTGGTT GTAAAATCACAATCAGCTCAAGATCACTTACTAGGCGTTGTGGTGAAGACACCTTCCTCT AACAACAGACAATATATAGTTCTAGTTCTGACTCCAGAATTGCCTTCAACTCTGGAAACT TCGTCAGATAGAAGCAACAGGAAAGATCAAAAAAATTCTGAAATGCAGATACTATTGCCT AAATCAAGACGGGGTTATGATGATGAGTATTGTTCGTCAGTCACCTCCCGGAAGGGATCT GGCGCTGTCAACATCAAATTGCCTCACCGCGGTAATGCTGCCGGCATGAATTATGAGGTT CGAGGAGTTGATAACAAGGATTTCTTGTATATATGTGTGAAAAAGATTAAGATCGACCAA GTTCGGCTTCTTGAAGATGTTAGTGCTGGGGCCTACTCTAACGCAATACAACAGCTGCTC AGTTTGAAATCTGAAGGAAATAAGTATCCTCCAGCCTTAGATCCGGTTAAAGATCTGAAG TTGAAGGACATGAATCTTGTGGAAGCATACTACAAATGGAATAATCTCTTGCAGAAAATG GCACAGAATAAGTGTCATGGTTGTATTAAATTGGATGAGCACATGAAATTGGCTAAAGAA TTAGAGCTGCACCGAGCGGAAGTGAATGCTTTGAGGTTTGAAATGTCAGATGAGGCACTT CAGCAAATGCCAGATTTTCAGGGTCGGATAGATGTGTTAAAAGAAATTGGCTGCATAGAT GCTGATCTTGTAGTTCAAATCAAAGGTCGTGTTGCTTGCGAAATGAATTCCGTAGAGGAG CTGATATGCACAGAATGTTTATTTGAGAATCAGCTTGATGACCTGGAGCCAGAAGAGGCA GTGGCGATCATGTCTTCCTTTGTGTTTCAGCAAAAGGAGACTTCTGAATCTTTCCTCACG CCAAAGCTTTCTCAGGCTAAAAAGAGATTACATGAAACTGCAATAAGACTTGGGGAGCTT CAGGCTCAGTTTAAGCTGCCGATTGACCCAAAGGAGTATGCCCAAGAGAACCTTAAGTTT GGTTTGGTTGAAGTGGTATATGAATGGGCAAAGGGGACCCCATTTGCTGAGATATGTGAA CTCACAGATGTCCCTGAAGGTGTTATAGTGAGGACTATTGTTAGATTAGACGAGACTTGT CGTGAATTTAGAAATGCTGCTGCAATTATGGGCAACTCTGCACTGTACAAGAAAATGGAA ACTGCATCTAATGTGATCAAGCGCGATATCGTGTTTGCAGCTAGCTTATATATTACCGGA GTTTGA

Peptide Sequence

PEP ID	Solyc06g005990.3.1
PEP Infomation	Helicase, putative (AHRD V3.3 *** B9S370_RICCO)
Sequence	MDRLVAAKELSFRIGFTGHSGHLTIEPLPPVERDTPLNSIPDFILPPAFPKETPDTIKEY IREKYLLPQLDADEFSPEKVGRQWEFDWFERAKILPDPSLPRSVVVPTWEVPFRRQRDRL DNGRWEPKSEERDVSELTIGADDSGALPRIVGPPKDFVRGSINSRPFRPGGLDDSPSLGR VVPDGATNGEWVREVLNGGPAQTAPPSFKQGPDLGDLKDTHSCSWNIYEDQSAATNTVEV KLSDLSVQFDDLFKKAWQEDVTEFVGDGHTSELQSEAEQLPSVKPELLQVEAEVNKSEVA DKGLDTEISVLDEILSVEAEGSISRLDVDNDGARQENDGWAVTGGGEVIVERFHDLIPDM ALTFPFELDPFQKEAIYHLEKGNSVFVAAHTSAGKTVVAEYAFALAAKHCTRAVYTAPIK TISNQKYRDFCGKFDVGLLTGDISIRPEASCLIMTTEILRSMLYRGADMIRDIEWVIFDE VHYVNDVERGVVWEEVIIMLPRHINFVLLSATVPNTIEFADWIGRTKQKQIRVTGTTKRP VPLEHCLFYSGELYKVCENEEFLPHGFRAAKDVHKKKTTSSVSGGAGLRPGSSTAADKGR GQRRDSSSQAKQHKHSGPQRLGNFGGGWGTQSTGPGQNVMGFRRSEASLWLTLINKLLKK SLLPVVIFCFSKNRCDKSADNIPGTDLTSSSEKSEIRIFCDKAFSRLKGSDRNLPQIVRI QSLLHRGIAVHHAGLLPIVKEVVEMLFCRGLVKVLFSTETFAMGVNAPARTVVFDSLRKF DGKEFRQLLPGEYTQMAGRAGRRGLDKTGTVVVMCRDEIPFENDLKHVIVGTATRLESQF RLTYIMILHLLRVEELKVEDMLKRSFAEFHAQKKLPEQQQLLMRKLAQPTKSVECIKGEP AIEEYYDMYLEAEKYSHQIAEAVMQSPASQQYLSLGRAVVVKSQSAQDHLLGVVVKTPSS NNRQYIVLVLTPELPSTLETSSDRSNRKDQKNSEMQILLPKSRRGYDDEYCSSVTSRKGS GAVNIKLPHRGNAAGMNYEVRGVDNKDFLYICVKKIKIDQVRLLEDVSAGAYSNAIQQLL SLKSEGNKYPPALDPVKDLKLKDMNLVEAYYKWNNLLQKMAQNKCHGCIKLDEHMKLAKE LELHRAEVNALRFEMSDEALQQMPDFQGRIDVLKEIGCIDADLVVQIKGRVACEMNSVEE LICTECLFENQLDDLEPEEAVAIMSSFVFQQKETSESFLTPKLSQAKKRLHETAIRLGEL QAQFKLPIDPKEYAQENLKFGLVEVVYEWAKGTPFAEICELTDVPEGVIVRTIVRLDETC REFRNAAAIMGNSALYKKMETASNVIKRDIVFAASLYITGV*

Transcript Sequence

Transcript ID	Solyc06g005990.3.1
Transcript Infomation	Helicase, putative (AHRD V3.3 *** B9S370_RICCO)
Sequence	GTACCAAAATAAATATTGCATCCTTAAACAATAAAGTGCTAAATATTTAGGCCCTAAGAA AAAATAATATAAATAAACATCCCGCCGTGACCAATCGCCGGTGAGTATCTCCAAAACCAC GGCAAACGGCAATTTTTTTTACCTTGTTCGGAATTCTTCCGGCGGAGCATCGCCGGAGAT ATTTGAATACTGACACACTTGTTTTGAGCCTGTAGAAGAATCAAAACTGAAAAAAAGCGA GGAAAGAGCATTAACAGAGTAATGGATCGGTTAGTAGCAGCAAAGGAGCTATCTTTTCGA ATAGGGTTTACTGGACACAGTGGTCACCTCACGATCGAGCCTCTCCCTCCTGTTGAACGC GATACTCCTCTCAATTCTATTCCTGACTTCATTTTGCCACCTGCATTTCCAAAGGAAACA CCTGATACAATAAAGGAATATATTAGGGAGAAGTATCTATTGCCTCAGCTAGATGCAGAC GAGTTTTCTCCCGAAAAAGTTGGAAGGCAGTGGGAGTTTGATTGGTTTGAGAGAGCTAAA ATCCTTCCAGATCCATCTTTGCCTCGATCTGTTGTTGTCCCTACATGGGAAGTGCCTTTT AGACGTCAGCGGGACAGATTGGATAATGGAAGATGGGAACCAAAGTCAGAGGAGAGAGAT GTATCAGAACTTACAATTGGAGCTGATGATTCTGGGGCTCTACCGCGCATTGTTGGACCA CCAAAAGATTTTGTTAGAGGAAGCATTAACAGTCGTCCATTTCGACCTGGTGGCTTGGAT GATTCCCCTTCGTTGGGCAGAGTTGTTCCTGATGGTGCTACAAACGGTGAATGGGTAAGG GAGGTTCTTAATGGCGGTCCTGCCCAAACCGCTCCTCCAAGCTTTAAGCAAGGACCTGAT CTTGGCGATCTTAAGGATACACATTCATGCTCTTGGAATATATATGAGGATCAGAGTGCT GCTACGAACACAGTGGAGGTGAAACTGAGTGACTTATCCGTGCAGTTTGATGACTTGTTC AAGAAAGCTTGGCAAGAGGATGTCACAGAGTTTGTTGGAGATGGTCATACGTCTGAATTG CAATCTGAAGCGGAACAATTGCCATCTGTGAAGCCAGAGCTACTTCAGGTTGAAGCTGAA GTAAACAAGTCTGAAGTGGCTGACAAGGGTCTAGACACTGAGATATCTGTCTTGGATGAG ATTTTGTCCGTTGAAGCAGAAGGATCAATATCAAGATTGGATGTGGATAATGATGGTGCA CGTCAAGAGAATGACGGATGGGCTGTTACTGGTGGCGGTGAAGTAATTGTAGAACGATTT CATGATCTCATCCCTGATATGGCTCTTACTTTCCCATTTGAACTCGACCCCTTTCAAAAG GAGGCCATCTATCATCTTGAAAAAGGGAACTCTGTCTTTGTTGCTGCTCATACATCTGCT GGGAAGACTGTTGTGGCTGAATATGCATTTGCTTTGGCAGCTAAACATTGTACCAGGGCT GTATATACAGCTCCAATCAAAACAATCAGCAATCAGAAATACAGGGATTTTTGTGGGAAG TTTGATGTTGGCCTTCTCACAGGTGATATAAGCATAAGACCTGAGGCCTCTTGTCTTATA ATGACCACTGAGATATTAAGGTCAATGCTTTATAGAGGGGCTGATATGATTCGGGATATA GAATGGGTTATATTTGATGAAGTGCATTATGTCAATGATGTTGAAAGAGGTGTTGTTTGG GAAGAAGTTATCATTATGCTCCCAAGACATATCAACTTTGTCCTCCTTTCAGCTACGGTA CCCAACACAATTGAATTTGCAGACTGGATTGGTCGTACAAAACAAAAGCAAATTCGTGTT ACTGGGACGACCAAAAGACCTGTCCCTTTGGAACATTGTCTCTTCTATTCTGGGGAGCTT TACAAAGTGTGTGAGAATGAAGAGTTTCTGCCTCATGGATTTAGAGCAGCCAAAGATGTA CATAAGAAGAAGACCACAAGTTCTGTCTCTGGCGGCGCCGGCTTGCGTCCTGGGTCTTCA ACAGCTGCTGATAAGGGTCGAGGGCAGAGGCGTGATAGCTCTTCTCAGGCAAAGCAGCAC AAGCATTCTGGTCCCCAAAGATTGGGGAATTTTGGTGGTGGTTGGGGAACGCAAAGCACT GGGCCTGGACAGAATGTTATGGGGTTTAGGAGATCAGAGGCGTCTTTGTGGTTGACGCTG ATTAATAAACTCTTGAAGAAATCACTGTTACCTGTGGTTATATTTTGTTTTTCGAAGAAT CGATGTGACAAATCAGCTGATAACATCCCTGGTACCGATCTCACAAGTAGCTCTGAGAAA AGTGAAATTAGGATATTCTGTGATAAAGCATTTTCGCGGCTTAAGGGATCCGACAGAAAC TTACCGCAGATTGTCAGAATTCAAAGCCTTCTCCACAGGGGCATTGCTGTGCATCATGCA GGGCTCCTCCCAATTGTCAAGGAAGTTGTAGAAATGCTTTTTTGTCGAGGTTTGGTTAAG GTTCTGTTCTCGACAGAGACTTTTGCAATGGGAGTTAATGCTCCAGCCAGGACGGTTGTT TTTGATTCTTTAAGAAAGTTTGATGGCAAGGAATTTAGGCAGCTACTTCCCGGAGAGTAC ACTCAGATGGCTGGGCGTGCTGGAAGGAGAGGACTTGATAAGACTGGTACAGTTGTGGTG ATGTGCCGAGATGAGATCCCTTTTGAAAATGATTTGAAGCATGTAATAGTTGGTACTGCG ACTAGGCTTGAATCTCAGTTTCGACTGACCTACATCATGATTTTGCATCTACTTCGGGTT GAAGAACTGAAGGTTGAGGACATGCTGAAAAGAAGTTTTGCTGAATTTCATGCTCAGAAA AAACTACCTGAGCAACAACAACTCTTGATGCGAAAGCTTGCTCAGCCTACAAAATCTGTT GAATGCATAAAGGGTGAACCAGCAATTGAGGAATACTATGACATGTATTTGGAGGCAGAG AAATATAGCCACCAAATAGCAGAAGCAGTAATGCAGTCGCCAGCTTCTCAGCAGTACCTT AGTCTTGGGAGAGCAGTGGTTGTAAAATCACAATCAGCTCAAGATCACTTACTAGGCGTT GTGGTGAAGACACCTTCCTCTAACAACAGACAATATATAGTTCTAGTTCTGACTCCAGAA TTGCCTTCAACTCTGGAAACTTCGTCAGATAGAAGCAACAGGAAAGATCAAAAAAATTCT GAAATGCAGATACTATTGCCTAAATCAAGACGGGGTTATGATGATGAGTATTGTTCGTCA GTCACCTCCCGGAAGGGATCTGGCGCTGTCAACATCAAATTGCCTCACCGCGGTAATGCT GCCGGCATGAATTATGAGGTTCGAGGAGTTGATAACAAGGATTTCTTGTATATATGTGTG AAAAAGATTAAGATCGACCAAGTTCGGCTTCTTGAAGATGTTAGTGCTGGGGCCTACTCT AACGCAATACAACAGCTGCTCAGTTTGAAATCTGAAGGAAATAAGTATCCTCCAGCCTTA GATCCGGTTAAAGATCTGAAGTTGAAGGACATGAATCTTGTGGAAGCATACTACAAATGG AATAATCTCTTGCAGAAAATGGCACAGAATAAGTGTCATGGTTGTATTAAATTGGATGAG CACATGAAATTGGCTAAAGAATTAGAGCTGCACCGAGCGGAAGTGAATGCTTTGAGGTTT GAAATGTCAGATGAGGCACTTCAGCAAATGCCAGATTTTCAGGGTCGGATAGATGTGTTA AAAGAAATTGGCTGCATAGATGCTGATCTTGTAGTTCAAATCAAAGGTCGTGTTGCTTGC GAAATGAATTCCGTAGAGGAGCTGATATGCACAGAATGTTTATTTGAGAATCAGCTTGAT GACCTGGAGCCAGAAGAGGCAGTGGCGATCATGTCTTCCTTTGTGTTTCAGCAAAAGGAG ACTTCTGAATCTTTCCTCACGCCAAAGCTTTCTCAGGCTAAAAAGAGATTACATGAAACT GCAATAAGACTTGGGGAGCTTCAGGCTCAGTTTAAGCTGCCGATTGACCCAAAGGAGTAT GCCCAAGAGAACCTTAAGTTTGGTTTGGTTGAAGTGGTATATGAATGGGCAAAGGGGACC CCATTTGCTGAGATATGTGAACTCACAGATGTCCCTGAAGGTGTTATAGTGAGGACTATT GTTAGATTAGACGAGACTTGTCGTGAATTTAGAAATGCTGCTGCAATTATGGGCAACTCT GCACTGTACAAGAAAATGGAAACTGCATCTAATGTGATCAAGCGCGATATCGTGTTTGCA GCTAGCTTATATATTACCGGAGTTTGATTAGGTCCGGAAGCCTTGATTTCATTTGCAATT CTAAAGGACCTGACGATACACATGTTGTACACTAGAATATGTTCGCCAAGGTGTGGACTT TGAGCAAGGCTACCCTACAATTTGGCTAATTTGTACAGAAATTCAAGTCTTTCAAATGTA CATTTAGCAATCGACAGTAGATTACACCATGATTAGCACAGAGAGATACATAAACTTAAA GGATTTACTGTATGACATTCTCTTAAAATTTAGGTATGATTTTGAAGTTCTGCATCTATG TGTTTTGTCTTAAAGTTGTTACACAAGACCTTGAGTTGTTGTTTATCTCTTTTGAATGTG ATTAAGCAAGCTGTTGATCTGGTCATCTTTTTATTTCTCTTTGGGTGACAAAGAAGGTAA CGAAGTGTTCCCTCAATGTGGGTAGCAATAGAACAACAACTAAAACACAATTAAGAAGGA TTTAAGATTTCACACAGGAAGAAAAGGATATCCTTTATAATGCTATTTTTCGTTCACAAC AGTTTAAATTCGAGACCTCTGGTTAATGGTTTAGGTTATTCGAACCATTCCATCACACCC CCTTAGCTGATATTTGGCTAATATAAATTCTTCATTAAAATCGTTTGAAATAATTCATAT AGCATGTTATTCAAATACAACCAAACAAAAGAGACACAAGTTGAAGCCAAGCTTCACAGA AATACAAAATAAGCAGATACTGTCTTTATCAAAGACTCAATTTCAGTTATCACTTCTGTG TGGTTTTCCTGAGATAAAATTAACCTGATCCACCAAAAATGACAGACAATTAGACATTAA TTTTGAGAATTACAATAACCAAAGAAATAAAATAAAACAGTTTGGGTTGACATATTACAC AAGAATTCCAAGTGGCAATACATGTGGAAATCAATTTGAGTGAATAAAATAACCCCCAAC CCCCTCCCTAAAACTATTTTTGTCTTTCGAGTTTCAAACCTAAACTATCAGGTGTTCACC ATGAACTCATTGTGTCATGTGAGATCACTTCTAAGACTTTTTCATCTCACGCGCCTCTCA ACAAGTTATCGCAAACATTTAGTCACATATACAAAAAGTTTCATTTGGTCATACCTCATC AACAGCAGAAGGAATCCAATCATTAGTAGCTGGATTCCCCTTGTAAACATGGCTTGGATC AGTAGTATAATCAGCTCCTATATTAAAAGTGTTCTCATTATTCTCCACTTTGATAAATCC TGTTCCTGTCTGCATTTTCCCACAAAAAAAAAGTTCATCAACCTTATTTTTTAAACCAAA AGCTACATTGCTCTTGGATCCAATAAAAATACAGCCACGAGCATGTCAGATCCTCCGAAA TTACATTATTTTTAGAGAACCCGAGCAACATAGACACTAAAAGAACACAATCAAACCTCT CTGTAACA