Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g005970.2.1
CDS Infomation

Glycosyl hydrolase family protein (AHRD V3.3 *** AT3G47000.1)
Sequence

ATGGATTTTGTGTACAAGAACCCATCAGCTCTTATTGAGGAAAGAGTAAAAGATTTGTTG
TCTCGGATGACACTTGAAGAAAAAATAGGCCAAATGACTCAGATCGAACGCAGTGTTGCT
ACCCCCTCTGTCATTACTGACCTTTCTATAGGGAGTATACTCAGTGTTGGAGGCAGTGCG
CCATTTGAGGATGCTCCATCGGAAGCTTGGGCAGATATGGTTGACGGATTTCAAAAGGCT
GCGCTGGAATCACGGCTTGGGATTCCGCTTCTTTATGGAGTTGACGCTATTCATGGCAAT
AACAATGTTTATGGTGCTACCGTTTTTCCACAAAATGTGGGCCTTGGAGCCACCAGAGAT
GCAGACTTGGTTCAGAAGATTGGGATTGTGACTGCTCTTGAAGTCAGGGCTTGTGGCATT
AACTATACTTTTGCTCCCTGTGTTGCTGTATGTAGAGATCCCAGGTGGGGAAGATGCTAT
GAGAGTTATGGCGAAGACACCGAACTTATTAGGAAGATGACCTCAATTGTCACAGGCTTG
CAAGGGCAACCACCTCCTGGATACCCCCAAAACTATCCTTTTCTAGCTGGAAGAGACAAG
GTTGTTGCCTGTGCAAAGCACTTTGTTGGAGATGGGGGTACTGACCGAGGTATAAATGAG
GGAAATACCATATCATCGTATGAAGATCTAGAGAGAATACATATTCCCCCATATATTGAC
TGTATTTCTCAGGGAGTTTGCACAGTAATGGCATCCTACTCTAAATGGAATGGAAGCCAC
CTGCATTCTAGCCACTTTCTTCTTACTGAAGTTTTGAAAGGGAAGCTCGGATTTAAGGGC
TTTGTTATTTCTGATTCCGAAGGAATTGACCGATTTTTCCATCCTCATGGATCTAACTAT
GACCAAAGTATTTTGGCAGCAATCAATGCAGGGATTGACATGGTGATGGTTCCTTTTCGG
TATCAATTATTTCTCGATCATTTGAAATATCTTGTGGAATCTGGGAATATTCCAATGACC
AGAATTGATGATGCTGTTGAAAGGATCCTGAGAGTTAAGTTTGTTTCCGGAGCTTTTGAG
AACCCTCTGAGTGATAGGTCATTGTTGGATACCGTTGGTTGTCATCAACATCGCGAATTA
GCACGTGAAGCAGTTCGCAAATCACTGGTTCTTCTAAAGAATGGGAAGGATGTAACAAAA
CCATTTCTTCCGCTAGATAGGAAGGCAAAGAGAATTCTTGTAGCAGGAAAACATGCTGAC
GACCTTGGATTCCAATGTGGAGGGTGGACTAAAACATGGGAAGGAATGGGCGGAAGAATC
ACGATTGGTACAACTATTCTGGAAGCTATTAAAGATGCTGTTGGAGGGGAAACAGAACTG
GTATATGAAGAAAATCCTTCACCAGACACCTTTGCGAGTCAAGACTTCTCTTATTGCATT
GTAGTTGTTGGTGAACCTCCCTATTGTGAAAGCGGTGGAGACAGCCAAGACCTCAGAATT
CCTCTTGGCGGAGAAGAACTAATAAGCTTGGTTGCAGACAGAGTTCCAACGTTGGTGATA
TTGATCTCCGGAAGGCCTTTACATATAGAGCCTTCGATTCTGGAGAAAATGGATGCCTTC
GTTGCTGCATGGTTACCGGGCACTGAGGGAACTGGTATCACTGATGTCATATTCGGAGAT
TTTGAATTCCATGGAACCCTCCCTATGACATGGTTTAAGAGTGTAGATCAATTACCCCTG
CATCAAGAACAGAACTCCTATGAACCTCTCTTTCCATTCGGCTACGGATTAACAAGTAAA
AACAAGGTGATCTAG

Peptide Sequence

PEP ID

Solyc06g005970.2.1
PEP Infomation

Glycosyl hydrolase family protein (AHRD V3.3 *** AT3G47000.1)
Sequence

MDFVYKNPSALIEERVKDLLSRMTLEEKIGQMTQIERSVATPSVITDLSIGSILSVGGSA
PFEDAPSEAWADMVDGFQKAALESRLGIPLLYGVDAIHGNNNVYGATVFPQNVGLGATRD
ADLVQKIGIVTALEVRACGINYTFAPCVAVCRDPRWGRCYESYGEDTELIRKMTSIVTGL
QGQPPPGYPQNYPFLAGRDKVVACAKHFVGDGGTDRGINEGNTISSYEDLERIHIPPYID
CISQGVCTVMASYSKWNGSHLHSSHFLLTEVLKGKLGFKGFVISDSEGIDRFFHPHGSNY
DQSILAAINAGIDMVMVPFRYQLFLDHLKYLVESGNIPMTRIDDAVERILRVKFVSGAFE
NPLSDRSLLDTVGCHQHRELAREAVRKSLVLLKNGKDVTKPFLPLDRKAKRILVAGKHAD
DLGFQCGGWTKTWEGMGGRITIGTTILEAIKDAVGGETELVYEENPSPDTFASQDFSYCI
VVVGEPPYCESGGDSQDLRIPLGGEELISLVADRVPTLVILISGRPLHIEPSILEKMDAF
VAAWLPGTEGTGITDVIFGDFEFHGTLPMTWFKSVDQLPLHQEQNSYEPLFPFGYGLTSK
NKVI*

Transcript Sequence

Transcript ID

Solyc06g005970.2.1
Transcript Infomation

Glycosyl hydrolase family protein (AHRD V3.3 *** AT3G47000.1)
Sequence

TAATGATCAAATAATATCGGAATGCCCGATAAAATTTTCTGGGACACGTGTACAGATTCT
TTCTTTGTAATTTTGTCTTCTTCCTAAAAGACAAATGTTTGTATTTCTGTGCACTTTTCA
CTTACTCTGCCATTTTTTCTTCTTCTTCTAAGTTTAACTTGCAGTGAGCGTTAATGGCTA
TTCCACTTATCACCATTTTCTTCATTTCTCAATAATCCCACTTTTAAGTTCTTTCCCAGT
TACTATTAACACAAATATTTAAGAAAAATCTCAACTTTTTTGTTGAATACTTGTAATAAG
CAGAAATGGATTTTGTGTACAAGAACCCATCAGCTCTTATTGAGGAAAGAGTAAAAGATT
TGTTGTCTCGGATGACACTTGAAGAAAAAATAGGCCAAATGACTCAGATCGAACGCAGTG
TTGCTACCCCCTCTGTCATTACTGACCTTTCTATAGGGAGTATACTCAGTGTTGGAGGCA
GTGCGCCATTTGAGGATGCTCCATCGGAAGCTTGGGCAGATATGGTTGACGGATTTCAAA
AGGCTGCGCTGGAATCACGGCTTGGGATTCCGCTTCTTTATGGAGTTGACGCTATTCATG
GCAATAACAATGTTTATGGTGCTACCGTTTTTCCACAAAATGTGGGCCTTGGAGCCACCA
GAGATGCAGACTTGGTTCAGAAGATTGGGATTGTGACTGCTCTTGAAGTCAGGGCTTGTG
GCATTAACTATACTTTTGCTCCCTGTGTTGCTGTATGTAGAGATCCCAGGTGGGGAAGAT
GCTATGAGAGTTATGGCGAAGACACCGAACTTATTAGGAAGATGACCTCAATTGTCACAG
GCTTGCAAGGGCAACCACCTCCTGGATACCCCCAAAACTATCCTTTTCTAGCTGGAAGAG
ACAAGGTTGTTGCCTGTGCAAAGCACTTTGTTGGAGATGGGGGTACTGACCGAGGTATAA
ATGAGGGAAATACCATATCATCGTATGAAGATCTAGAGAGAATACATATTCCCCCATATA
TTGACTGTATTTCTCAGGGAGTTTGCACAGTAATGGCATCCTACTCTAAATGGAATGGAA
GCCACCTGCATTCTAGCCACTTTCTTCTTACTGAAGTTTTGAAAGGGAAGCTCGGATTTA
AGGGCTTTGTTATTTCTGATTCCGAAGGAATTGACCGATTTTTCCATCCTCATGGATCTA
ACTATGACCAAAGTATTTTGGCAGCAATCAATGCAGGGATTGACATGGTGATGGTTCCTT
TTCGGTATCAATTATTTCTCGATCATTTGAAATATCTTGTGGAATCTGGGAATATTCCAA
TGACCAGAATTGATGATGCTGTTGAAAGGATCCTGAGAGTTAAGTTTGTTTCCGGAGCTT
TTGAGAACCCTCTGAGTGATAGGTCATTGTTGGATACCGTTGGTTGTCATCAACATCGCG
AATTAGCACGTGAAGCAGTTCGCAAATCACTGGTTCTTCTAAAGAATGGGAAGGATGTAA
CAAAACCATTTCTTCCGCTAGATAGGAAGGCAAAGAGAATTCTTGTAGCAGGAAAACATG
CTGACGACCTTGGATTCCAATGTGGAGGGTGGACTAAAACATGGGAAGGAATGGGCGGAA
GAATCACGATTGGTACAACTATTCTGGAAGCTATTAAAGATGCTGTTGGAGGGGAAACAG
AACTGGTATATGAAGAAAATCCTTCACCAGACACCTTTGCGAGTCAAGACTTCTCTTATT
GCATTGTAGTTGTTGGTGAACCTCCCTATTGTGAAAGCGGTGGAGACAGCCAAGACCTCA
GAATTCCTCTTGGCGGAGAAGAACTAATAAGCTTGGTTGCAGACAGAGTTCCAACGTTGG
TGATATTGATCTCCGGAAGGCCTTTACATATAGAGCCTTCGATTCTGGAGAAAATGGATG
CCTTCGTTGCTGCATGGTTACCGGGCACTGAGGGAACTGGTATCACTGATGTCATATTCG
GAGATTTTGAATTCCATGGAACCCTCCCTATGACATGGTTTAAGAGTGTAGATCAATTAC
CCCTGCATCAAGAACAGAACTCCTATGAACCTCTCTTTCCATTCGGCTACGGATTAACAA
GTAAAAACAAGGTGATCTAGACGAGATGTGTCGAAGAAAGGTTTAGTGAAATAGACATGT
CTATAAAGATGCGGACTATCAGAAAGACTGTATGAAGCTTTATGCAACCTCTTGTGTACT
TTGTACCATTTGGTCTCTGGCATATGATGTTACATTAAGTCCAAATAATTATATATTATG
TACTATTATTACCATATGTGAACAAGGAAAAATGCGTAACAGTTTCATTTAATAACGATA
TAAAATATTCAACTTATTTTAGC