Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc06g005950.3.1
CDS Infomation	ATP-dependent zinc metalloprotease FTSH protein (AHRD V3.3 *** G7K6A4_MEDTR)
Sequence	GTTCAATTTTTTCTTCATTTCTTCCATAAATTTTTCTCTCAAATGGCAATAATCGAACAC CATCTTCGTCCCTTTATTCATGTACAAATTTCTTTGAATTTTCAGTATAATCCGAAGTAT TTTTACAGACATACTTTCTTCTGCAATCGCTATGGTTTTTTACACGAAAAACCCATTTCT TTGATCTCCCAAAAGACCCCTTTTCGTTTAAATGCTATATTTCCAAAATCCCTTTCTGGG TTTGATTTTTTGGGGAAAAAGAATTCACAGAAAAAGTTAACTCCACGTGAAATTAGTGTT CAGGCTAATGGGTCCTGTCAACAAGATTCGGATTCAACGGAAAAATCCGAATCTTCTGGT ACAGACAGCAAGAAATCTCCGGGTTCAGAACCGGGTCCTCGGGTCCCTAATTCGGGTTCG TCAAGAAGGGAGAAGCAAGGGAAAGATAATTGGTGGTGGTCCAAGGGCAGGAAATTGAGG TGGGAACCGATAGTTCAAGCTCAAGAAATTGGGGTTTTGTTATTGCAATTGGGGATTGTG ATGTTTGTTATGAGATTACTAAGACCCGGTTTGCCATTACCCGGGTCGGATCCTAGAGCT CCGACAATGTTTGTAACTGTTCCATATAGTGAGTTTTTGAGTAAGATAAATAGTAATCAG GTGCAGAAAGTTGAGGTTGATGGTGTACATATAATGTTCAAATTGAAGAGTGAAGTGAGT AGTAGTGTAATAGAGACTGAGGTTGTGAATGTGAATGAAAATGGAAATAGTAAGTTGCAA GATTCTGAGGCAGTGATAAGGAGTGTAACTCCTACAAAGAAAATTGTGTATACTACCACG AGGCCGAGTGATATAAAGACCCCTTATGAGAAAATGCTTGAGAATGATGTTGAGTTTGGT TCTCCCGATAAACGGTCTGGTGGATTCATGAACTCTGCACTGATAGCATTATTTTATATT GCTGTACTAGCGGGGCTTCTTCATCGCTTCCCAGTGAATTTTTCTCAGAGCACAGCTGGC CAACTCAGAAATCGCAAGTCAGGGGGTTCAGGTGGCACAAAAGTGTCTGAACTAGGGGAA ACTATCACATTTGCTGATGTTGCAGGCGTTGACGAGGCTAAGGAGGAGCTAGAAGAAATT GTGGAATTTCTTAGAAATCCAGATAAGTATGTACGGCTTGGTGCACGTCCTCCTCGTGGT GTTCTACTGGTTGGTCTCCCCGGGACAGGAAAGACACTTCTAGCAAAGGCTGTTGCTGGG GAAGCTGAGGTTCCTTTTATCAGTTGTTCTGCAAGTGAGTTTGTAGAATTGTATGTAGGA ATGGGAGCATCACGCGTCCGTGACCTGTTTGCACGGGCAAAGAAGGAGGCACCTTCAATA ATTTTTATCGATGAGATAGATGCTGTGGCAAAAAGCCGTGATGGAAAATTCCGCATTGTA AGCAATGATGAAAGAGAGCAGACATTGAACCAACTACTCACTGAGATGGACGGATTTGAC AGTAATTCTGCTGTAATTGTTCTTGGAGCAACAAATCGCTCTGATGTCTTAGACCCTGCT CTTCGCCGACCTGGGAGATTTGACCGTGTTGTAATGGTGGAAGCGCCTGATAGGTGTGGA AGAGAAGCTATCTTAAAGGTACATGTCTCCAAGAAAGAACTTCCCTTGGCACAAGATGTT GATCTTGGTAACATCGCTTCTATGACTACTGGTTTTACGGGGGCAGATCTTGCAAATCTG GTGAATGAAGCTGCTCTGTTGGCAGGAAGACTGAGTAAAGTTGTAGTTGAAAGAATTGAT TTCATTCAAGCTGTTGAGCGTTCAATTGCGGGCATTGAGAAGAAGACTGCCAAACTGCAG GGAAGTGAGAAGGGTGTAGTAGCAAGGCATGAAGCAGGGCACGCAGTAGTTGGGACTGCT GTTGCAAATCTTCTTTCCGGGCAGCCACGGGTTGAGAAGCTGAGCATATTGCCAAGATCT GGAGGGGCTTTAGGATTTACTTATATTCCTCCAACCAATGAGGACAGATATCTGCTCTTT GTTGATGAATTGCGTGGGAGGTTGGTCACTCTTCTTGGTGGACGTGCTGCGGAAGAAGTA TTGTACTCTGGACGTGTATCTACTGGTGCTCTTGATGATATACGCAGAGCTACAGACATG GCCTACAAGGCAGTGGCTGAATATGGTCTTAGTCAGACCATTGGCCCTATCTCAGTGGCA ACACTTTCTGGAGGTGGGATGGATGATGGTGGATCCATGTCCTGGGGAAGGGACCAGGGG CATCTTGTTGATCTTGTTCAAAGAGAGGTCAAGGCTTTACTGCAGTCTGCACTTGATATT GCACTCTGTGTTGTACGTGCTAATCCCAAAGTTCTTGAGGGGTTGGGAGCTCAATTGGAA GAGAATGAGAAAGTAGAAGGTGAGCAACTACAAGAATGGTTGAGCATGGTCGTTGCACCA GCAGAACTTAATTTTTTCATAAAGGGCAAAGAAGGATCTTTACTTCCACTGCAAGCAGGC TCTGGATGA

Peptide Sequence

PEP ID	Solyc06g005950.3.1
PEP Infomation	ATP-dependent zinc metalloprotease FTSH protein (AHRD V3.3 *** G7K6A4_MEDTR)
Sequence	VQFFLHFFHKFFSQMAIIEHHLRPFIHVQISLNFQYNPKYFYRHTFFCNRYGFLHEKPIS LISQKTPFRLNAIFPKSLSGFDFLGKKNSQKKLTPREISVQANGSCQQDSDSTEKSESSG TDSKKSPGSEPGPRVPNSGSSRREKQGKDNWWWSKGRKLRWEPIVQAQEIGVLLLQLGIV MFVMRLLRPGLPLPGSDPRAPTMFVTVPYSEFLSKINSNQVQKVEVDGVHIMFKLKSEVS SSVIETEVVNVNENGNSKLQDSEAVIRSVTPTKKIVYTTTRPSDIKTPYEKMLENDVEFG SPDKRSGGFMNSALIALFYIAVLAGLLHRFPVNFSQSTAGQLRNRKSGGSGGTKVSELGE TITFADVAGVDEAKEELEEIVEFLRNPDKYVRLGARPPRGVLLVGLPGTGKTLLAKAVAG EAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRIV SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVEAPDRCG REAILKVHVSKKELPLAQDVDLGNIASMTTGFTGADLANLVNEAALLAGRLSKVVVERID FIQAVERSIAGIEKKTAKLQGSEKGVVARHEAGHAVVGTAVANLLSGQPRVEKLSILPRS GGALGFTYIPPTNEDRYLLFVDELRGRLVTLLGGRAAEEVLYSGRVSTGALDDIRRATDM AYKAVAEYGLSQTIGPISVATLSGGGMDDGGSMSWGRDQGHLVDLVQREVKALLQSALDI ALCVVRANPKVLEGLGAQLEENEKVEGEQLQEWLSMVVAPAELNFFIKGKEGSLLPLQAG SG*

Transcript Sequence

Transcript ID	Solyc06g005950.3.1
Transcript Infomation	ATP-dependent zinc metalloprotease FTSH protein (AHRD V3.3 *** G7K6A4_MEDTR)
Sequence	GTTCAATTTTTTCTTCATTTCTTCCATAAATTTTTCTCTCAAATGGCAATAATCGAACAC CATCTTCGTCCCTTTATTCATGTACAAATTTCTTTGAATTTTCAGTATAATCCGAAGTAT TTTTACAGACATACTTTCTTCTGCAATCGCTATGGTTTTTTACACGAAAAACCCATTTCT TTGATCTCCCAAAAGACCCCTTTTCGTTTAAATGCTATATTTCCAAAATCCCTTTCTGGG TTTGATTTTTTGGGGAAAAAGAATTCACAGAAAAAGTTAACTCCACGTGAAATTAGTGTT CAGGCTAATGGGTCCTGTCAACAAGATTCGGATTCAACGGAAAAATCCGAATCTTCTGGT ACAGACAGCAAGAAATCTCCGGGTTCAGAACCGGGTCCTCGGGTCCCTAATTCGGGTTCG TCAAGAAGGGAGAAGCAAGGGAAAGATAATTGGTGGTGGTCCAAGGGCAGGAAATTGAGG TGGGAACCGATAGTTCAAGCTCAAGAAATTGGGGTTTTGTTATTGCAATTGGGGATTGTG ATGTTTGTTATGAGATTACTAAGACCCGGTTTGCCATTACCCGGGTCGGATCCTAGAGCT CCGACAATGTTTGTAACTGTTCCATATAGTGAGTTTTTGAGTAAGATAAATAGTAATCAG GTGCAGAAAGTTGAGGTTGATGGTGTACATATAATGTTCAAATTGAAGAGTGAAGTGAGT AGTAGTGTAATAGAGACTGAGGTTGTGAATGTGAATGAAAATGGAAATAGTAAGTTGCAA GATTCTGAGGCAGTGATAAGGAGTGTAACTCCTACAAAGAAAATTGTGTATACTACCACG AGGCCGAGTGATATAAAGACCCCTTATGAGAAAATGCTTGAGAATGATGTTGAGTTTGGT TCTCCCGATAAACGGTCTGGTGGATTCATGAACTCTGCACTGATAGCATTATTTTATATT GCTGTACTAGCGGGGCTTCTTCATCGCTTCCCAGTGAATTTTTCTCAGAGCACAGCTGGC CAACTCAGAAATCGCAAGTCAGGGGGTTCAGGTGGCACAAAAGTGTCTGAACTAGGGGAA ACTATCACATTTGCTGATGTTGCAGGCGTTGACGAGGCTAAGGAGGAGCTAGAAGAAATT GTGGAATTTCTTAGAAATCCAGATAAGTATGTACGGCTTGGTGCACGTCCTCCTCGTGGT GTTCTACTGGTTGGTCTCCCCGGGACAGGAAAGACACTTCTAGCAAAGGCTGTTGCTGGG GAAGCTGAGGTTCCTTTTATCAGTTGTTCTGCAAGTGAGTTTGTAGAATTGTATGTAGGA ATGGGAGCATCACGCGTCCGTGACCTGTTTGCACGGGCAAAGAAGGAGGCACCTTCAATA ATTTTTATCGATGAGATAGATGCTGTGGCAAAAAGCCGTGATGGAAAATTCCGCATTGTA AGCAATGATGAAAGAGAGCAGACATTGAACCAACTACTCACTGAGATGGACGGATTTGAC AGTAATTCTGCTGTAATTGTTCTTGGAGCAACAAATCGCTCTGATGTCTTAGACCCTGCT CTTCGCCGACCTGGGAGATTTGACCGTGTTGTAATGGTGGAAGCGCCTGATAGGTGTGGA AGAGAAGCTATCTTAAAGGTACATGTCTCCAAGAAAGAACTTCCCTTGGCACAAGATGTT GATCTTGGTAACATCGCTTCTATGACTACTGGTTTTACGGGGGCAGATCTTGCAAATCTG GTGAATGAAGCTGCTCTGTTGGCAGGAAGACTGAGTAAAGTTGTAGTTGAAAGAATTGAT TTCATTCAAGCTGTTGAGCGTTCAATTGCGGGCATTGAGAAGAAGACTGCCAAACTGCAG GGAAGTGAGAAGGGTGTAGTAGCAAGGCATGAAGCAGGGCACGCAGTAGTTGGGACTGCT GTTGCAAATCTTCTTTCCGGGCAGCCACGGGTTGAGAAGCTGAGCATATTGCCAAGATCT GGAGGGGCTTTAGGATTTACTTATATTCCTCCAACCAATGAGGACAGATATCTGCTCTTT GTTGATGAATTGCGTGGGAGGTTGGTCACTCTTCTTGGTGGACGTGCTGCGGAAGAAGTA TTGTACTCTGGACGTGTATCTACTGGTGCTCTTGATGATATACGCAGAGCTACAGACATG GCCTACAAGGCAGTGGCTGAATATGGTCTTAGTCAGACCATTGGCCCTATCTCAGTGGCA ACACTTTCTGGAGGTGGGATGGATGATGGTGGATCCATGTCCTGGGGAAGGGACCAGGGG CATCTTGTTGATCTTGTTCAAAGAGAGGTCAAGGCTTTACTGCAGTCTGCACTTGATATT GCACTCTGTGTTGTACGTGCTAATCCCAAAGTTCTTGAGGGGTTGGGAGCTCAATTGGAA GAGAATGAGAAAGTAGAAGGTGAGCAACTACAAGAATGGTTGAGCATGGTCGTTGCACCA GCAGAACTTAATTTTTTCATAAAGGGCAAAGAAGGATCTTTACTTCCACTGCAAGCAGGC TCTGGATGACAGAAAGTGCAAGCTTAACCCAGTCAACAGAGTACAAAAACGAATTTCGAA TAAGGATTTCCACGCCTTCATCTGTGCTCTCTAGGGAAACAAAGCTATATTCCTGAACCA GATGGGCATCACTTGCTGGCATCCAGACAGCGTGATTTTGCATGTGTTAGTAAGGTAAAT TGACAGCTACTTAACTCCTACAAACACCATTGTTATATACCACGATCACAGATTGTTAAC TCGAAGAGAAGGCATGCGCAAAAGATCTAGCCAAGAGTTTCTTGGTTCTCTAGAGGTGAA ATGAAAATAGGCTCGTGATCAGAGTGATGTCTGTTGGTATTTTCTTCTACATCACTTGTA CATGTGCCCAATTATTCTTAGTAATTACACAAGAATCAATACCTTAATATTGTAATATAC ATCTGTACTGCAGCTTACAAAGAACTAATCCATGTCTAATGTTGTGGGAGAAGGTGTGAA ACTGTGTATACAATGTAATCTTTCTGATTATGAGACAAAGTTTCAGTAGGTTGCCATAAT CTTTGACTTGTGTAAAATTACAAGTATTGGATGAGGTAATAGTGACAATTCCTTGTGCTT GTGGTTAAGTCGTATGAGGAAATGTGGCAAAGTCATCAATTGACAAGGCTTGTATCCTAT ATTTTATGTTGAGAAGGACATTATCTTATACACTTGTTGCATATTCGAAATTAACTTAAT CTTATGA