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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g005850.3.1
CDS Infomation

RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *** AT5G59000.1)
Sequence

ATGCCTAATCTTGGAGTTAATAAAGCTGACACAGAGGCAAATGGTGGTTCCAGCCGTCAT
TCATCGCCGCCGCGGAGGGCGAGCAGTGAGACAACCACAACTGATGGGAGTTTCCACTTA
ACTGATTCTGATTCTGACCAATCTTGGCACTCACCTTTAGGCTCTGTGGATGATATTTCA
GTATATTGTGATCAACAGCCACTGAGGAGGGATACTTCTTTGTCAGATGATGAGATTGAT
TTGGAGAGTGGTGAATTGGAGATGAAGTTGCATAGTAAAGAAGAGAAGGATTGTAGGATT
TGTCATTTGAGTTTGTTGAGAAGTGGTGGAATTAGTAGTGGTGAAGATCAAGTGCAAGAG
GATTCAGGTGGGATGGCTATTGAATTGGGATGTTCTTGCAAAGGTGACTTAGGTGCTGCT
CACAAACAATGTGCTGAGACTTGGTTCAAAACCAAGGGAAACACAATTTGTGAAATCTGT
GGTACCAATGCACTGAACATTGCTGGAGAGCAGACAAATGAAGCCAATAATGCTTCAGTA
GCCCCTCTTGCAGCGTCCGCAGCACCTATAGCCTTTTCTGAAAGCCAAGGCTGTTGGCAT
GGGCGCCGTGTCATGAATTTTCTACTTGCATCTATGGTTTTTGCCTTTGTCATCTCATGG
CTTTTTCACTTCAATATATTGCCCTAG

Peptide Sequence

PEP ID

Solyc06g005850.3.1
PEP Infomation

RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *** AT5G59000.1)
Sequence

MPNLGVNKADTEANGGSSRHSSPPRRASSETTTTDGSFHLTDSDSDQSWHSPLGSVDDIS
VYCDQQPLRRDTSLSDDEIDLESGELEMKLHSKEEKDCRICHLSLLRSGGISSGEDQVQE
DSGGMAIELGCSCKGDLGAAHKQCAETWFKTKGNTICEICGTNALNIAGEQTNEANNASV
APLAASAAPIAFSESQGCWHGRRVMNFLLASMVFAFVISWLFHFNILP*

Transcript Sequence

Transcript ID

Solyc06g005850.3.1
Transcript Infomation

RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *** AT5G59000.1)
Sequence

AAAAGGAAAACTCTACTCCATTGTCATTGCAAGTCACAATTACTTCTCTACTTTTAGAAA
AAGCAAAAGAGAACAAGAAATTACTCCAACATACTCACCATTTCAGCCATGCTTCTCATC
ATCAACTCCTTTAAAATCCTTCAATTTTTTCCTCAGCCTCTGATCTGATAATCATCAGCT
TCTCTTTTTTCCTTAATTTATGAGCTAAGAAGCAGTTACTTCAAGCCATTTCCTTTGAAA
GTTCAATCTTTCAAGGTCAAAAGAGTTTCTTGAAATGCTTCAAAAATTGCATCTTTTTCT
CATTTTGTGCTCAAAGGCAATTTCTTTTTGATAAAAAAGTGTCAAACTTTTTAATGCAGA
ACCTCAAGAATGCTACCAGTTGTCCTTGTTTTCTCAATCTGTGAGCTGAAAGACAGTTTT
TTGGGTAATGGGTACTTAAAAGTTTCAACTTTTAACACTTCTCATCTTGAATTCTGTTGA
TTTTCGTTAAATTCTTCAATCTTCCCTCTCAATCTGTGAACTGAAAGACAGTTTTTTGGT
TGAAAAATGCCTAATCTTGGAGTTAATAAAGCTGACACAGAGGCAAATGGTGGTTCCAGC
CGTCATTCATCGCCGCCGCGGAGGGCGAGCAGTGAGACAACCACAACTGATGGGAGTTTC
CACTTAACTGATTCTGATTCTGACCAATCTTGGCACTCACCTTTAGGCTCTGTGGATGAT
ATTTCAGTATATTGTGATCAACAGCCACTGAGGAGGGATACTTCTTTGTCAGATGATGAG
ATTGATTTGGAGAGTGGTGAATTGGAGATGAAGTTGCATAGTAAAGAAGAGAAGGATTGT
AGGATTTGTCATTTGAGTTTGTTGAGAAGTGGTGGAATTAGTAGTGGTGAAGATCAAGTG
CAAGAGGATTCAGGTGGGATGGCTATTGAATTGGGATGTTCTTGCAAAGGTGACTTAGGT
GCTGCTCACAAACAATGTGCTGAGACTTGGTTCAAAACCAAGGGAAACACAATTTGTGAA
ATCTGTGGTACCAATGCACTGAACATTGCTGGAGAGCAGACAAATGAAGCCAATAATGCT
TCAGTAGCCCCTCTTGCAGCGTCCGCAGCACCTATAGCCTTTTCTGAAAGCCAAGGCTGT
TGGCATGGGCGCCGTGTCATGAATTTTCTACTTGCATCTATGGTTTTTGCCTTTGTCATC
TCATGGCTTTTTCACTTCAATATATTGCCCTAGATGCTTCTGAAGATCGTCCTGGCAACG
TGGTTTGTATTGTGAG