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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g005300.3.1
CDS Infomation

TOX high mobility group box family member 4-A, putative isoform 1 (AHRD V3.3 *** A0A061H046_THECC)
Sequence

ATGGAAGAATTTGATTCTTTATGGAGTTACCAAGAGTCTATGGATGAAATGAAACAAAAG
CTTTTATACACAAGTCTTGAAGTTGAAAGACTCAATATGGAAGCAAGTGAAGAAAAGAGG
AAGAACAATCAACTAATCCATCTCATTAAATTAGCTTATCAAGAAAGAGATGAAGCAAAA
GATCACCTACACAAATTACTCAACAAAATAAATCCATCTCAAATCATCAACATTGATAGT
ACTACTACTACTACAACAACAATTGAATCAAATAGCCTTAGTGAAACATACAACAATTCA
TCATCATTATCTCCTATCGAGTCATTTTTGGACGTTGTTTCGTCTCCTGAACAATACAGC
ACTCTTCCTCTTATCGCGCAACAAGTAGATAATGATGATGATCAAGGTTCGTTGATTATC
GATAGACTTGTCAAAGGAAAGACATTGCCTCAACAGGGCAAGTTTTTACAAGCTGTGCTT
GAATCAGGTCCACTATTGCAAACATTACTTGTAGCTGGTCCGTTACCTAGATGGCGTAAT
CCGCCTCAATTTAAACCCTTACATATTCCTCGTGTTACCATTAAAAATTGTGAAGGTGTG
ATGATGAATAATTGTTATGGTTCATCATTGATCAACAATACTCAACCTTATTTTGACATG
GCTTGTGCATCATCACCTTATTTAGGTCCAAATTGTAACAGTTTTGTCCATATTAACAAG
AGACAAAGGTTAGAGATATAG

Peptide Sequence

PEP ID

Solyc06g005300.3.1
PEP Infomation

TOX high mobility group box family member 4-A, putative isoform 1 (AHRD V3.3 *** A0A061H046_THECC)
Sequence

MEEFDSLWSYQESMDEMKQKLLYTSLEVERLNMEASEEKRKNNQLIHLIKLAYQERDEAK
DHLHKLLNKINPSQIINIDSTTTTTTTIESNSLSETYNNSSSLSPIESFLDVVSSPEQYS
TLPLIAQQVDNDDDQGSLIIDRLVKGKTLPQQGKFLQAVLESGPLLQTLLVAGPLPRWRN
PPQFKPLHIPRVTIKNCEGVMMNNCYGSSLINNTQPYFDMACASSPYLGPNCNSFVHINK
RQRLEI*

Transcript Sequence

Transcript ID

Solyc06g005300.3.1
Transcript Infomation

TOX high mobility group box family member 4-A, putative isoform 1 (AHRD V3.3 *** A0A061H046_THECC)
Sequence

TTGAAATAAAAGAATTTTCAAAAGAAGGAAAGATACATTTTTTTAGTCAAATTAAAAAAA
AATAAAACAAACTAGTAAAATCTTTTAAATTTTATGTTTATGGAAGGTCTTTATTAAGAT
TCCATAAATAATTTTGCCTTTTCTATGGTGGGGATTGGTTGGTCTATACTACACCTTCTT
TTGTCCTTTTTTGTTCCTTGTTTCCTTCTATAAAATATACATATTACAACTCACTCACCT
CTTATATAAAAAAAACTTCCCTCTCAATATCTTTTCAATATTATCTTCTCTTTTTTCCTC
TACTTCTTCTTTCAAGTTCATATCAAAAAAAAATGGAAGAATTTGATTCTTTATGGAGTT
ACCAAGAGTCTATGGATGAAATGAAACAAAAGCTTTTATACACAAGTCTTGAAGTTGAAA
GACTCAATATGGAAGCAAGTGAAGAAAAGAGGAAGAACAATCAACTAATCCATCTCATTA
AATTAGCTTATCAAGAAAGAGATGAAGCAAAAGATCACCTACACAAATTACTCAACAAAA
TAAATCCATCTCAAATCATCAACATTGATAGTACTACTACTACTACAACAACAATTGAAT
CAAATAGCCTTAGTGAAACATACAACAATTCATCATCATTATCTCCTATCGAGTCATTTT
TGGACGTTGTTTCGTCTCCTGAACAATACAGCACTCTTCCTCTTATCGCGCAACAAGTAG
ATAATGATGATGATCAAGGTTCGTTGATTATCGATAGACTTGTCAAAGGAAAGACATTGC
CTCAACAGGGCAAGTTTTTACAAGCTGTGCTTGAATCAGGTCCACTATTGCAAACATTAC
TTGTAGCTGGTCCGTTACCTAGATGGCGTAATCCGCCTCAATTTAAACCCTTACATATTC
CTCGTGTTACCATTAAAAATTGTGAAGGTGTGATGATGAATAATTGTTATGGTTCATCAT
TGATCAACAATACTCAACCTTATTTTGACATGGCTTGTGCATCATCACCTTATTTAGGTC
CAAATTGTAACAGTTTTGTCCATATTAACAAGAGACAAAGGTTAGAGATATAG