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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g005200.3.1
CDS Infomation

Ribonuclease P subunit p30 (AHRD V3.3 *-* A0A0B0MN27_GOSAR)
Sequence

ATGGGTTTCTTCGACCTCAATATACCCTACTATGAATCCGATAGAAACATCGTTACAGAT
AAAAAAGCCCTAAAAGCCATACGTCTCAAGCTCATAATCAAGGCTATGGAATTGGGTTAT
ACTGGAATAGCATACAATCGTACTTTCAGAGGTGTAATGTCGGAATCGGATCGTTGTTGT
ATCCCTTTATTCCCTCTTTCTTCTGTTTTGAAACTTGCACCTTCACTTTCCTCAGCTGTA
AAGTTTCACAGAGAACTCTTAAATGTACCCGTTTCAGCCCCTTTTCGGCAGTACACGCGT
TTGACTGTTCTAGTCGATAGTTCGTCTCAGGCTTCGGCTCTTAATTCTGGTAATCCTATT
CTGAAAAGCTATGATATTGTTGCCGTGAGACCACTCAATCAGCAGGCGTTTGAACAGGCT
TGCCAGGTTTCCGAGGTGGACATAATTGCTATTGATTTCTCGGATAAGTTGCCATTTAGG
TTGAAGCAATCCATGGTTAAAGCTGCAATTCAGCGTGGAGTATATTTTGAGATTACTTAC
TCAAGTCTTATTTTGGATGCCCAAATGAGAAGGCAAACTATATCTAACGCTAAGTTGCTG
GTGGATTGGACTCGAGGAAAGAATCTTCTTTTCTCCAGTGCTGCTCCTTCTGTAACCGAA
CTTAGAGGGCCTTATGATGTAGCGAATTTGGCATCTTTGCTCGGTCTCCAACTGGAACGT
GCTAAAGCAGCGCTTTCCAAAAATTGTAGAACTGTTATAACTAATGCTTTAAGGAAAAAA
TCTTACCACAAGGAGGCAATTAAGGTTGAACCAATAACATCGGGCATCAAGGAACCTGAA
TTTGATGATTGGCTCAACAAATGGGATCCTATCTCTAGTGGTGAGGGTGATTTGCTGTTA
GACGACATCAAGAAATCTTTTTCTGGCTCCAGAAATGTACGAAAAGAAGTGAAACCCATC
GACTTTAGTTCAGCTGTGAATAACCTGCCTGCACATGGGCTCCAGATTAGAGATTTGATA
TCTTCAAAAGTGGCGGGGCAAGTTCCTGTGGATGCTATTGAAGAATTGGCAGGTGTTCAG
GTGGATGAGATGACTCTTCCAAGATCTGGGATATCACAAGAACCAGGTGGTGTCAATTTT
CTGCCTGTAGAATGTTCAATTCTAGAAGATGATATGGATAAAAACCAACAGGGTTCTGGT
TCTGAAAAAGTTAGGGTGCCACATTTTTCCATTGCTCTAAACAATGCTGCTAATTTGGAT
GAACAAGAGGAAAACGGTAGGATTGATAATGAGGATATACAATTTACAAAGAAGTTAGAT
ATAACAGATACATCTGGGACCAAAATGCATGATTTTCAAACAGAAACTAGTCCAGTTAGT
TGTGAAGGAAATGCTGTCTTGCCAGATGGTGTGACAACCCACACCTGCAGAAGAGATATC
GAAGTTAGAGAAAATGGTATGACTGACAATGATGAAATGAAAATTACAGGTAAGTTGGAC
GTGCAGGATACTTCTTCTGAGAAGATAATACAGGATTTTCAACTTGAAACTTGTTCAGCT
AGTAGTGATGGAGTCTTGCCAGAGAGTGCAGCAAACTATACTTGCAGAACAGATTCTGAA
GTCACTCTTTCTGCTAATTCTTCCTTGGCGGATGTTACACTTTCAAAGGATGAGACTTTC
ACTGGTTCAAATGTTCAGCAGCTTGGGATCTCAGGTAGCTTCCACACAGATTCTCGTGAT
CAAAATGGCGCAGATGGTGTAGCCTTGGTTGAGGCACGAGTTAATAACAATCCAACTGAC
AAAGAACAATTTAGGGAGATGAGATATTGTTCTACTGCCTTAGCTGGTGGATCATCCAAC
AGTGAGCATAGCAATCCTATGGAAGTGGATGATGAGTATTTTTTAATTGCTGAGAAGGTG
CCAAGCAAAGATGTTACAGAGGGAGAACCGGAACACGCTGGTGATAGTGCTGGACTAAGT
CATCAGATCCTGGGTGGATCTTTGTCAGGGAAAATGAAACGTAAGACATCTTATCGGCCT
TCTTTGTTTCCTTTCAAACGCTTGTTGACTCGTAGGCCTTCCACTTTCAGAGGCTGA

Peptide Sequence

PEP ID

Solyc06g005200.3.1
PEP Infomation

Ribonuclease P subunit p30 (AHRD V3.3 *-* A0A0B0MN27_GOSAR)
Sequence

MGFFDLNIPYYESDRNIVTDKKALKAIRLKLIIKAMELGYTGIAYNRTFRGVMSESDRCC
IPLFPLSSVLKLAPSLSSAVKFHRELLNVPVSAPFRQYTRLTVLVDSSSQASALNSGNPI
LKSYDIVAVRPLNQQAFEQACQVSEVDIIAIDFSDKLPFRLKQSMVKAAIQRGVYFEITY
SSLILDAQMRRQTISNAKLLVDWTRGKNLLFSSAAPSVTELRGPYDVANLASLLGLQLER
AKAALSKNCRTVITNALRKKSYHKEAIKVEPITSGIKEPEFDDWLNKWDPISSGEGDLLL
DDIKKSFSGSRNVRKEVKPIDFSSAVNNLPAHGLQIRDLISSKVAGQVPVDAIEELAGVQ
VDEMTLPRSGISQEPGGVNFLPVECSILEDDMDKNQQGSGSEKVRVPHFSIALNNAANLD
EQEENGRIDNEDIQFTKKLDITDTSGTKMHDFQTETSPVSCEGNAVLPDGVTTHTCRRDI
EVRENGMTDNDEMKITGKLDVQDTSSEKIIQDFQLETCSASSDGVLPESAANYTCRTDSE
VTLSANSSLADVTLSKDETFTGSNVQQLGISGSFHTDSRDQNGADGVALVEARVNNNPTD
KEQFREMRYCSTALAGGSSNSEHSNPMEVDDEYFLIAEKVPSKDVTEGEPEHAGDSAGLS
HQILGGSLSGKMKRKTSYRPSLFPFKRLLTRRPSTFRG*

Transcript Sequence

Transcript ID

Solyc06g005200.3.1
Transcript Infomation

Ribonuclease P subunit p30 (AHRD V3.3 *-* A0A0B0MN27_GOSAR)
Sequence

GCTTATTTGTGCATTTTCCAAATAAAATAAATAGAATTAAACCCAAACCCCTTAAAACCC
TTCATCCGCCCCTTTCATCTCTATACTCTGCCAATTTCTCTCCTTCAACGCACACAAATT
CATCATCATGGGTTTCTTCGACCTCAATATACCCTACTATGAATCCGATAGAAACATCGT
TACAGATAAAAAAGCCCTAAAAGCCATACGTCTCAAGCTCATAATCAAGGCTATGGAATT
GGGTTATACTGGAATAGCATACAATCGTACTTTCAGAGGTGTAATGTCGGAATCGGATCG
TTGTTGTATCCCTTTATTCCCTCTTTCTTCTGTTTTGAAACTTGCACCTTCACTTTCCTC
AGCTGTAAAGTTTCACAGAGAACTCTTAAATGTACCCGTTTCAGCCCCTTTTCGGCAGTA
CACGCGTTTGACTGTTCTAGTCGATAGTTCGTCTCAGGCTTCGGCTCTTAATTCTGGTAA
TCCTATTCTGAAAAGCTATGATATTGTTGCCGTGAGACCACTCAATCAGCAGGCGTTTGA
ACAGGCTTGCCAGGTTTCCGAGGTGGACATAATTGCTATTGATTTCTCGGATAAGTTGCC
ATTTAGGTTGAAGCAATCCATGGTTAAAGCTGCAATTCAGCGTGGAGTATATTTTGAGAT
TACTTACTCAAGTCTTATTTTGGATGCCCAAATGAGAAGGCAAACTATATCTAACGCTAA
GTTGCTGGTGGATTGGACTCGAGGAAAGAATCTTCTTTTCTCCAGTGCTGCTCCTTCTGT
AACCGAACTTAGAGGGCCTTATGATGTAGCGAATTTGGCATCTTTGCTCGGTCTCCAACT
GGAACGTGCTAAAGCAGCGCTTTCCAAAAATTGTAGAACTGTTATAACTAATGCTTTAAG
GAAAAAATCTTACCACAAGGAGGCAATTAAGGTTGAACCAATAACATCGGGCATCAAGGA
ACCTGAATTTGATGATTGGCTCAACAAATGGGATCCTATCTCTAGTGGTGAGGGTGATTT
GCTGTTAGACGACATCAAGAAATCTTTTTCTGGCTCCAGAAATGTACGAAAAGAAGTGAA
ACCCATCGACTTTAGTTCAGCTGTGAATAACCTGCCTGCACATGGGCTCCAGATTAGAGA
TTTGATATCTTCAAAAGTGGCGGGGCAAGTTCCTGTGGATGCTATTGAAGAATTGGCAGG
TGTTCAGGTGGATGAGATGACTCTTCCAAGATCTGGGATATCACAAGAACCAGGTGGTGT
CAATTTTCTGCCTGTAGAATGTTCAATTCTAGAAGATGATATGGATAAAAACCAACAGGG
TTCTGGTTCTGAAAAAGTTAGGGTGCCACATTTTTCCATTGCTCTAAACAATGCTGCTAA
TTTGGATGAACAAGAGGAAAACGGTAGGATTGATAATGAGGATATACAATTTACAAAGAA
GTTAGATATAACAGATACATCTGGGACCAAAATGCATGATTTTCAAACAGAAACTAGTCC
AGTTAGTTGTGAAGGAAATGCTGTCTTGCCAGATGGTGTGACAACCCACACCTGCAGAAG
AGATATCGAAGTTAGAGAAAATGGTATGACTGACAATGATGAAATGAAAATTACAGGTAA
GTTGGACGTGCAGGATACTTCTTCTGAGAAGATAATACAGGATTTTCAACTTGAAACTTG
TTCAGCTAGTAGTGATGGAGTCTTGCCAGAGAGTGCAGCAAACTATACTTGCAGAACAGA
TTCTGAAGTCACTCTTTCTGCTAATTCTTCCTTGGCGGATGTTACACTTTCAAAGGATGA
GACTTTCACTGGTTCAAATGTTCAGCAGCTTGGGATCTCAGGTAGCTTCCACACAGATTC
TCGTGATCAAAATGGCGCAGATGGTGTAGCCTTGGTTGAGGCACGAGTTAATAACAATCC
AACTGACAAAGAACAATTTAGGGAGATGAGATATTGTTCTACTGCCTTAGCTGGTGGATC
ATCCAACAGTGAGCATAGCAATCCTATGGAAGTGGATGATGAGTATTTTTTAATTGCTGA
GAAGGTGCCAAGCAAAGATGTTACAGAGGGAGAACCGGAACACGCTGGTGATAGTGCTGG
ACTAAGTCATCAGATCCTGGGTGGATCTTTGTCAGGGAAAATGAAACGTAAGACATCTTA
TCGGCCTTCTTTGTTTCCTTTCAAACGCTTGTTGACTCGTAGGCCTTCCACTTTCAGAGG
CTGAAATTGAATCAGCTTACGACTTTGTGAGGTTGTTTATTTAAGTCGTTGACAAGTGTA
ATACCATCAAAGAACAAAGATGCAATTATACGGTTAATTCTTTTCTGCTGTTTGTTCCAT
GCGTAATAGCCTCTTGGATTCTTTATGGATCATTATTCCAACTTTGCTGTAGGTCTATTC
TTTGTTTATTCTGCACATTATATGCACCCGGAATATTGTATCGCTCAATAAATATTATAT
CTATCAGCAGGATTAAACAAAATCATTTCTTAGCACCTATT