Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g056470.1.1
CDS Infomation

ABC transporter family protein (AHRD V3.3 *** B9H498_POPTR)
Sequence

ATGAAGAAACAAGGTTGTGAAATTGAAGCAATAGGCATCAACTACACAATCTATACACAT
AAAAGAGAAACCCCTTTTAGTTTTTTAAGCAGAAAACAACACAACAAGTGTATAAAAGGA
GTTGAAGAATTGGAAAAAGATAGACATGTTCTTAAGGATGTGAATTGTAGAGCAAAAAGA
GGTGAAATTTTAGCTATTGTTGGTCCAAGTGGTGCTGGAAAGTCTACTTTTTTAGAAGTT
TTAGCAGGTAAGATTGAACCAGACAGTGGATCTATATTTGTGAACCAAAAACCAGTTGAT
AAAGCAAGTTTTAACAAGATTTCAGGCTATGTTACACAAAAGGACACTCTGTTTCCTCTG
TTAACTGTTGAAGAGACATTAAGTTTTACTGCAAAGCTAAGGTTAAAACTTGGTCCTAAA
GAATTGAGTTCAAGGGTCAAGTGTTTGATTCAAGAACTTGGTTTAGAACATGTTGGTGGT
GCTAGGATTGGTGATGATCGAATTCGAGGGATTTCAGGTGGTGAAAGGAGGAGAGTTTCT
ATAGGAGTTGAACTGATTCATGACCCTGGAGTCTTGATTCTTGATGAGCCAACTTCAGGT
CTTGACAGCACTTCAGCATTGCAGATCATTGACATGCTTAAAACCATGGCTGTTACTCGT
GATCGAACGATAATTCTTAGTATTCATCAACCATGTTTTAGGATCATGAAGTTGTTCAAC
TCAATCCTACTCTTGGCTAATGGTACAATCTTGCATCATGGAACCATTGAGCAGCTTAGT
TTAAGGTTAATCCTGTTGGGATTAGACCTTCCCCTTCATGTCAACATACTTGAATTCGCC
ATCGAATCCATTGACATAATCCAGACATTGTTGCCTCAATCAGCACTCATGATCAAGAAT
TCAGGTAACTTCACTTTGCATCAACTCTTTCAAGAATCTAAACAAGACTCTTTGTCAATG
CCTATCCATGTTGGCTTTGCAAATTCAAGTTTGCAAGAGATTGTGATCCTTACAATAAGA
TTTTGGAAAATCATATACAGAACAAAGGAGCTTTTTGGTTTTAAGACACTACAAATGTTA
CTGTCAGGAGTTGTTTTAGGATCAATATTTTACAATCTTGAAGATGATTTAGTTGGAGCA
CAAGCAAGAGTTGGCTTATTTGCATTCGTATTGACATATCTTTTGTCAAGTACAACAGAA
GCATTACCAATATTCTTACAAGAAAGGGAAATACTGATGAAAGAAACATGTTGTGGGAGT
TACAGAGTTTCATCTTATGTCATAGCCAACAGCCTTGTCTACTTGCCATTTCTATTGATT
CTTGCATTGCTTTTCTCAACTCCATTATACTGGATGGTTGGTTTAAACAAACACTTAATG
GCATTCATGCACTTTTTGTTACTAATTTGGCTCATTCTATACACAGCAAACTCAATTGTT
GTGTGTTGTAGTGCCTTGGTACCAAACTTCATCATTGGGAACTCACTAGTATGTGCTATG
ATGGGATCGTGCGCGTTATTCTCTGGATACTTTGTTTCTAAGAATGAGATACCAAATTAT
TGGATTGTCATGCATTATGTATCACTCTTTAAGTACCCTTTTGAAGGATTCTTGATTAAT
GAGTTCTCTGGTTCTGGAAAATGCTTACAATACATGTTTGGGATGTGTTTGGCTAGTGGT
GATCAAGTACTAAAAGATGAAGGATATGGTGGTGAAGAAAGTAGAAGGAAGAACTTGATT
ATTATGGTTTGTTTTATCATGCTTTATAGGTTCATTTCTTATGTAATTCTTAGAGTTAGA
TGTACTTCTAAAGGTGGATTCAAAAACGTCTTCATTTCAATTTGA

Peptide Sequence

PEP ID

Solyc05g056470.1.1
PEP Infomation

ABC transporter family protein (AHRD V3.3 *** B9H498_POPTR)
Sequence

MKKQGCEIEAIGINYTIYTHKRETPFSFLSRKQHNKCIKGVEELEKDRHVLKDVNCRAKR
GEILAIVGPSGAGKSTFLEVLAGKIEPDSGSIFVNQKPVDKASFNKISGYVTQKDTLFPL
LTVEETLSFTAKLRLKLGPKELSSRVKCLIQELGLEHVGGARIGDDRIRGISGGERRRVS
IGVELIHDPGVLILDEPTSGLDSTSALQIIDMLKTMAVTRDRTIILSIHQPCFRIMKLFN
SILLLANGTILHHGTIEQLSLRLILLGLDLPLHVNILEFAIESIDIIQTLLPQSALMIKN
SGNFTLHQLFQESKQDSLSMPIHVGFANSSLQEIVILTIRFWKIIYRTKELFGFKTLQML
LSGVVLGSIFYNLEDDLVGAQARVGLFAFVLTYLLSSTTEALPIFLQEREILMKETCCGS
YRVSSYVIANSLVYLPFLLILALLFSTPLYWMVGLNKHLMAFMHFLLLIWLILYTANSIV
VCCSALVPNFIIGNSLVCAMMGSCALFSGYFVSKNEIPNYWIVMHYVSLFKYPFEGFLIN
EFSGSGKCLQYMFGMCLASGDQVLKDEGYGGEESRRKNLIIMVCFIMLYRFISYVILRVR
CTSKGGFKNVFISI*

Transcript Sequence

Transcript ID

Solyc05g056470.1.1
Transcript Infomation

ABC transporter family protein (AHRD V3.3 *** B9H498_POPTR)
Sequence

ATGAAGAAACAAGGTTGTGAAATTGAAGCAATAGGCATCAACTACACAATCTATACACAT
AAAAGAGAAACCCCTTTTAGTTTTTTAAGCAGAAAACAACACAACAAGTGTATAAAAGGA
GTTGAAGAATTGGAAAAAGATAGACATGTTCTTAAGGATGTGAATTGTAGAGCAAAAAGA
GGTGAAATTTTAGCTATTGTTGGTCCAAGTGGTGCTGGAAAGTCTACTTTTTTAGAAGTT
TTAGCAGGTAAGATTGAACCAGACAGTGGATCTATATTTGTGAACCAAAAACCAGTTGAT
AAAGCAAGTTTTAACAAGATTTCAGGCTATGTTACACAAAAGGACACTCTGTTTCCTCTG
TTAACTGTTGAAGAGACATTAAGTTTTACTGCAAAGCTAAGGTTAAAACTTGGTCCTAAA
GAATTGAGTTCAAGGGTCAAGTGTTTGATTCAAGAACTTGGTTTAGAACATGTTGGTGGT
GCTAGGATTGGTGATGATCGAATTCGAGGGATTTCAGGTGGTGAAAGGAGGAGAGTTTCT
ATAGGAGTTGAACTGATTCATGACCCTGGAGTCTTGATTCTTGATGAGCCAACTTCAGGT
CTTGACAGCACTTCAGCATTGCAGATCATTGACATGCTTAAAACCATGGCTGTTACTCGT
GATCGAACGATAATTCTTAGTATTCATCAACCATGTTTTAGGATCATGAAGTTGTTCAAC
TCAATCCTACTCTTGGCTAATGGTACAATCTTGCATCATGGAACCATTGAGCAGCTTAGT
TTAAGGTTAATCCTGTTGGGATTAGACCTTCCCCTTCATGTCAACATACTTGAATTCGCC
ATCGAATCCATTGACATAATCCAGACATTGTTGCCTCAATCAGCACTCATGATCAAGAAT
TCAGGTAACTTCACTTTGCATCAACTCTTTCAAGAATCTAAACAAGACTCTTTGTCAATG
CCTATCCATGTTGGCTTTGCAAATTCAAGTTTGCAAGAGATTGTGATCCTTACAATAAGA
TTTTGGAAAATCATATACAGAACAAAGGAGCTTTTTGGTTTTAAGACACTACAAATGTTA
CTGTCAGGAGTTGTTTTAGGATCAATATTTTACAATCTTGAAGATGATTTAGTTGGAGCA
CAAGCAAGAGTTGGCTTATTTGCATTCGTATTGACATATCTTTTGTCAAGTACAACAGAA
GCATTACCAATATTCTTACAAGAAAGGGAAATACTGATGAAAGAAACATGTTGTGGGAGT
TACAGAGTTTCATCTTATGTCATAGCCAACAGCCTTGTCTACTTGCCATTTCTATTGATT
CTTGCATTGCTTTTCTCAACTCCATTATACTGGATGGTTGGTTTAAACAAACACTTAATG
GCATTCATGCACTTTTTGTTACTAATTTGGCTCATTCTATACACAGCAAACTCAATTGTT
GTGTGTTGTAGTGCCTTGGTACCAAACTTCATCATTGGGAACTCACTAGTATGTGCTATG
ATGGGATCGTGCGCGTTATTCTCTGGATACTTTGTTTCTAAGAATGAGATACCAAATTAT
TGGATTGTCATGCATTATGTATCACTCTTTAAGTACCCTTTTGAAGGATTCTTGATTAAT
GAGTTCTCTGGTTCTGGAAAATGCTTACAATACATGTTTGGGATGTGTTTGGCTAGTGGT
GATCAAGTACTAAAAGATGAAGGATATGGTGGTGAAGAAAGTAGAAGGAAGAACTTGATT
ATTATGGTTTGTTTTATCATGCTTTATAGGTTCATTTCTTATGTAATTCTTAGAGTTAGA
TGTACTTCTAAAGGTGGATTCAAAAACGTCTTCATTTCAATTTGA