Plant GARDEN
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g056350.3.1
CDS Infomation

Cleft lip and palate transmembrane protein, putative (AHRD V3.3 *** B9RW92_RICCO)
Sequence

ATGGCGCCACCGGTGAATGGAGGTGGCGGAGAAGTGCAGGAACAGGCGGCGCAGCCGCAG
CAACAGCAGCGGGGAATTGGACAGATGCTGACGGGAGTAATAAGAATTGCGGTTTTCTGG
TACTTTGCTTCTAAGTTCTTCTCACCGAAAAAGCCTATGTCCGATCCGTCAGTTCCTAAT
TTCCAGATCTCAAATCTCTTCAGCAAAGGCGAACCTTTGGACATGTGGTTCTATCTTTCG
GAACAACAAAATTTCAGTGACTTTGGTAATGAAGGTGCACTTATTTGGCATGAGACAAAC
ATACCATATGCAGTTTGGGGACCAGAGAGTACCAGGTCTCTTTCTTTGAAGTATCATCTA
TCTGAGGCAGTGAAGAACAATGGGAGTCTTTATGCTCATGTTTACTTTGCACGTTCTGGG
TATTCTCCTGATCCAAATGATCCTCAGTATCAACCATTGGCTGCTTTTGGACGGACATAT
TCTATTGTGACATATTTACCCAAGTCTAAAGCAGATAAGAAGAAGAGCCTTTTAAGAAAC
TCTGAGGACTCGAAGGAGGATGTCACCAATCCTGAGGCAGTTCAAGAAGCTCAAGATGAT
CTTAAGGAGGATGGTCCTCCTGAATGGATTTCATATTGGAAACCTAATGTTACAATCAAC
TTGGTCGATGATTTCACAAGATACACTGCAAATGCCATTCCACCTATTGTTGCTCCTTAC
ATCAATATTGAATCTACAACAGGAAACTACTATCCGACTGTTTTCTTCAATGAGTTTTGG
TTGCTTAGGGATAAACTAATAGCTATCAATGATACAGTAACTGAGGTGCCTCTGCATCTA
GAGGTGAGTCCCATAAGCATGACAAAATGGCAGCTATTCCTGCAGATGGACCAGTCTTTC
CAAATTCATCGTAGTTATGGTAGCATGCTCGACGGAGAGTCTGATGAACTAAAGAGAGTG
TTTTTGGAAGGAAATCCTTACCTTCTGGGGGTGACTATGATTGTTTCAGTAATGCATTCA
CTATTTGATTTCCTGGCATTCAAGAATGATATTCAATTTTGGAATAAAAACAAGTCCATG
GAAGGGCTATCTGCAAAATCAGTGGTCGTGAACTTTTTCTGCCAGTTTATTGTCTTCCTG
TATTTGCTTGATAATGATACTTCATGGATGATACTTGCAAGTTCTGGTGTTGGTTGTTGC
ATTGAGTTCTGGAAAATAGGGAAGGCCATGCACATTGAGATTGACAGATCTGGTAGAATA
CCCATGTTGAGGTTCCGAGATCGGGAATCATATGCTGGAAATAAGACTAAAGAATATGAT
GATCTTGCCATGAAATATTTGTCTTATGTGCTGTTCTTCCTTGCCGTGTGCTTTGCCATA
TACTCTCTAATGTATGACCGCCACAAGAGTTGGTATTCATGGATCCTCTCATCCCTGACA
AGCTGTGTTTATATGTTTGGTTTTGTTATGATGTGTCCACAGTTGTTCATCAATTATAAA
CTGAAGTCTGTTGCTCATTTACCTTGGAGGCAAATGACCTACAAATTTCTTAATACCATC
ATTGATGATTTGTTTGCATTTGTGATAAAAATGCCAATGCTTCATCGCCTGTCTGTGTTC
CGTGATGATCTTATATTTTTGATATACCTATATCAGAGATGGGTTTATCCAGTAGATAAG
AAACGGGTGAATGAGTTTGGTTTTGCTGCGGAAGATGTGGATCAAGCTGCCAGTAGTTCA
GATACTCCCGCACTTAAAGAAGACGAGAAGAAAACTAACTAA

Peptide Sequence

PEP ID

Solyc05g056350.3.1
PEP Infomation

Cleft lip and palate transmembrane protein, putative (AHRD V3.3 *** B9RW92_RICCO)
Sequence

MAPPVNGGGGEVQEQAAQPQQQQRGIGQMLTGVIRIAVFWYFASKFFSPKKPMSDPSVPN
FQISNLFSKGEPLDMWFYLSEQQNFSDFGNEGALIWHETNIPYAVWGPESTRSLSLKYHL
SEAVKNNGSLYAHVYFARSGYSPDPNDPQYQPLAAFGRTYSIVTYLPKSKADKKKSLLRN
SEDSKEDVTNPEAVQEAQDDLKEDGPPEWISYWKPNVTINLVDDFTRYTANAIPPIVAPY
INIESTTGNYYPTVFFNEFWLLRDKLIAINDTVTEVPLHLEVSPISMTKWQLFLQMDQSF
QIHRSYGSMLDGESDELKRVFLEGNPYLLGVTMIVSVMHSLFDFLAFKNDIQFWNKNKSM
EGLSAKSVVVNFFCQFIVFLYLLDNDTSWMILASSGVGCCIEFWKIGKAMHIEIDRSGRI
PMLRFRDRESYAGNKTKEYDDLAMKYLSYVLFFLAVCFAIYSLMYDRHKSWYSWILSSLT
SCVYMFGFVMMCPQLFINYKLKSVAHLPWRQMTYKFLNTIIDDLFAFVIKMPMLHRLSVF
RDDLIFLIYLYQRWVYPVDKKRVNEFGFAAEDVDQAASSSDTPALKEDEKKTN*

Transcript Sequence

Transcript ID

Solyc05g056350.3.1
Transcript Infomation

Cleft lip and palate transmembrane protein, putative (AHRD V3.3 *** B9RW92_RICCO)
Sequence

ATACTATAAAATAAAATATCTCTGTTTCAATCGCCTCGAGATTTATATAAAACCTCTGCT
TTCACGTTTACTCATTCTTTCACTTCTCTCGTTATTTTATCGCCGGCGGCAAGTGATCGG
AGAATTTGTACTGTAAGCCGAGCTAGTTCCGTCAAGAATCGATGGCGCCACCGGTGAATG
GAGGTGGCGGAGAAGTGCAGGAACAGGCGGCGCAGCCGCAGCAACAGCAGCGGGGAATTG
GACAGATGCTGACGGGAGTAATAAGAATTGCGGTTTTCTGGTACTTTGCTTCTAAGTTCT
TCTCACCGAAAAAGCCTATGTCCGATCCGTCAGTTCCTAATTTCCAGATCTCAAATCTCT
TCAGCAAAGGCGAACCTTTGGACATGTGGTTCTATCTTTCGGAACAACAAAATTTCAGTG
ACTTTGGTAATGAAGGTGCACTTATTTGGCATGAGACAAACATACCATATGCAGTTTGGG
GACCAGAGAGTACCAGGTCTCTTTCTTTGAAGTATCATCTATCTGAGGCAGTGAAGAACA
ATGGGAGTCTTTATGCTCATGTTTACTTTGCACGTTCTGGGTATTCTCCTGATCCAAATG
ATCCTCAGTATCAACCATTGGCTGCTTTTGGACGGACATATTCTATTGTGACATATTTAC
CCAAGTCTAAAGCAGATAAGAAGAAGAGCCTTTTAAGAAACTCTGAGGACTCGAAGGAGG
ATGTCACCAATCCTGAGGCAGTTCAAGAAGCTCAAGATGATCTTAAGGAGGATGGTCCTC
CTGAATGGATTTCATATTGGAAACCTAATGTTACAATCAACTTGGTCGATGATTTCACAA
GATACACTGCAAATGCCATTCCACCTATTGTTGCTCCTTACATCAATATTGAATCTACAA
CAGGAAACTACTATCCGACTGTTTTCTTCAATGAGTTTTGGTTGCTTAGGGATAAACTAA
TAGCTATCAATGATACAGTAACTGAGGTGCCTCTGCATCTAGAGGTGAGTCCCATAAGCA
TGACAAAATGGCAGCTATTCCTGCAGATGGACCAGTCTTTCCAAATTCATCGTAGTTATG
GTAGCATGCTCGACGGAGAGTCTGATGAACTAAAGAGAGTGTTTTTGGAAGGAAATCCTT
ACCTTCTGGGGGTGACTATGATTGTTTCAGTAATGCATTCACTATTTGATTTCCTGGCAT
TCAAGAATGATATTCAATTTTGGAATAAAAACAAGTCCATGGAAGGGCTATCTGCAAAAT
CAGTGGTCGTGAACTTTTTCTGCCAGTTTATTGTCTTCCTGTATTTGCTTGATAATGATA
CTTCATGGATGATACTTGCAAGTTCTGGTGTTGGTTGTTGCATTGAGTTCTGGAAAATAG
GGAAGGCCATGCACATTGAGATTGACAGATCTGGTAGAATACCCATGTTGAGGTTCCGAG
ATCGGGAATCATATGCTGGAAATAAGACTAAAGAATATGATGATCTTGCCATGAAATATT
TGTCTTATGTGCTGTTCTTCCTTGCCGTGTGCTTTGCCATATACTCTCTAATGTATGACC
GCCACAAGAGTTGGTATTCATGGATCCTCTCATCCCTGACAAGCTGTGTTTATATGTTTG
GTTTTGTTATGATGTGTCCACAGTTGTTCATCAATTATAAACTGAAGTCTGTTGCTCATT
TACCTTGGAGGCAAATGACCTACAAATTTCTTAATACCATCATTGATGATTTGTTTGCAT
TTGTGATAAAAATGCCAATGCTTCATCGCCTGTCTGTGTTCCGTGATGATCTTATATTTT
TGATATACCTATATCAGAGATGGGTTTATCCAGTAGATAAGAAACGGGTGAATGAGTTTG
GTTTTGCTGCGGAAGATGTGGATCAAGCTGCCAGTAGTTCAGATACTCCCGCACTTAAAG
AAGACGAGAAGAAAACTAACTAATCTAAATCTCTCACTTAGGCTTCAGTACAACATACTT
CTTGTTTTGGATGAACTCAACACCTGCAACGATGATGAGTTGCTTCAGGACGTTTAGTAA
TTTCTCAGGATCTTTGGTTACAATATTCAGATTCGAGTAACTTAATCGAGAATTGGAAAT
GACAACAGCGGCCTGAGAGGGGAACTCTGGTACTTTCAGATGTCAATCACCTCTTCGTCA
CGTTTCTTAAGTTCCCATTTCTCAAGTCTTTTTGTAGCTATAAATACCAGATTCTATCTA
CATAGGTTTTCTGGATTTCTTTTCTATTTTGTTCCTGTTAGAATCAAATGTTTGTGTGAA
AGTGAAACTACAATGACTGCTGTTAGAAATGCACCAATATGGTTTCTTCTGTTCAAGGGA
TTCATTCATATTTCTCAAGACTCAATT