Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g056340.3.1
CDS Infomation

Peptidyl-prolyl cis-trans isomerase G isoform 1 (AHRD V3.3 *** A0A061FAS4_THECC)
Sequence

ATGAGTGGTACTCCGAACAAAAGACCTCACGAGGATGGTGGAAATGGTGGGAGTAGTAAC
CATAGTTACTCTTCTGCTCCAAAATACTCACATGATGACTCTGGTGCATTTCCCAAGGTG
ATGAGCTCAGGAACACCTGAATATCATGCCTCCTTTGATGTGGGCCAGAATGCTCGGATG
CCGAAGATTCAACGGACTGAATCTTCACGAGATGCAGATAGAAGATCTCCTGTGCTTCCA
ATGTACCGTGTCTCATCATGTCCAGTTGTTTCACATCCTGATCATTCTGTTGCTTCAGAA
AATAGGTTGGAGCCCAAGGAAGTTAACAAGGACGTCAAGGTTGAGAATCGTGATGCCAAA
AGTGAAATAAGGGAGTTGTACCAAGGGACTAAATCTGACAAGGATGATAGATTTGAGAAC
AGAGCTGATGATGGTAAGGACATTAAAAATAGTAGGGATACTTACCCTGAATACAAGGGA
GATGTGAAGACAGATAAGGACAGGTTTAGCGGAGTGAGTTGGAAAGATCCGAAAGAACAG
ACCAGGGGAAAAAGATATCCTGATCTCCCTGTTCCTGTCGGGAACATGGATCCATGGCAT
GCGTCAAGAACCCATGGTGCTGCTGAGATAGGAAAAGAAGTCTCAAATTCTGAGAACAGG
GATTTTGCTAAAGTGCGTGAAGCCGTTGCTGAAAATAAGATGGATTTGAAAGGTGACGAT
AAATACAAAGATAAAGAGAGAAAAAGGAAAGAAGGGAAGCACCGGGAATGGGGAGAAAGG
GATAAAGAGAGAAATGATTGTCGGAACAATTTACAACTAGGGAATAGCACTTCTGATAAC
AAGGAATTGCTTAAAGAGGAAAGGGAATCTGAGCGGTGGGAGAAGGAAAGAAATGATCTT
TCGAAGGATAAGGACAGACCAAAGGACTGGGAAAAGGACCATGCAAAGAGGGAAGTGTGG
AATGGAGTGGAGAGGGAGGTTTTGCAGAGTGAGAAAGAAGTGATTGATGTTCCTGGAAAA
ACAAACGAGCCGGAAAACTCAACAGTGGAGCAGAAGAAACAGAAAGATCATGATAACTGG
AAAAATACTGACAGGGATGGAAGTGAGAGGAGAAAGGAAAGAGATACTGATTTGGAAGGA
GAGAGGCCTGAGAAACGTGTCAGGTGTCATGATAAAGAACCAGAGGAAGGGGACCTGGAT
ACTGAAGGAGGAGGAGAAAGGGAAAGAGAAGCTTTTAATTATGGAGTTCAGCAGCGCAAG
AGAATGTCGCGGCCAAGAGGGAGCCCCATGGCCAATCGCGATCCTCGTTTTAGGTCGCAC
ACTCATGAAAATGAAGGATCTCAAGTGAAGCATGATGTATCTGCTGTCAATTACAGAGTT
GGTGAGTGTATGCCAGAACTGATTAAATTATGGAAGGAATATGAATCATCCAAAGCAGAT
GAAGCATCTGATAGCTCTCCAAGTGATCCTACTCTAGAAATTAGGATTCCAGCTGAACAC
GTATCAGCTACAAATCGGCAGGTGAGAGGTGGCCAACTATGGGGAACAGATATATACACC
AATGACTCGGATCTTGTCGCAGTTCTTATGCACACAGGTTACTGTCGTACAACTGCGTCT
CCTCTTTTGCCTACTATTACGGAGTTACGTGCTACTATCAGGGTACTACCTCCACAAAAT
TGCTACATATCTACTCTGAGGAACAATGTGCGATCACGTGCGTGGGGAGCTGCAGTTGGC
TGCAGCTATCGTATTGAGCGGTGCTCTGTTGTGAAGAAAGGAGGTGGAACAATCGATCTT
GAACCTTGTCTAACACATTCCTCAACCTTGGAGCCTACTCTTGCTCCGGTGGCGGTAGAG
CGCACTATGACCACTCGAGCTGCAGCTTCGAATGCACTACGACAACAGAGGTTTGTACGT
GAAGTGACAATTCAGTTCAACTTATGCAATGAGCCTTGGCTCAAATACAGTATCAGTGTT
GTTGCTGACAAGGGTCTAAAAAAGGCCCTTTTTACATCTTCACGCCTGAAGAAGGGAGAA
GTTCTTTACTTGGAAACTCATTCTAAGAGGTATGAGCTCTGTTTTAGTGGTGAAAAGATG
GTTAAGGCTACAACTTCTCTGATGCATGAAATGGATGTTGACAAACCTCAAAGTCACAAT
TTACACATGGCAAACGGAGAAAAAAATGGAGTGAATGGTGAGAATACGATGGTAGATATG
TTCCGACTGTCTCGTTGTAAGAAGCCCCTGCCTCAGAAACTAATGCAATCAGTTGGAATT
CCTTTGCCCCTTGAACATGTTGAGGTTTTGGAGGAGAATCTGGAGTGGGAAAACATTCAA
TGGTCACAAACTGGTGTTTGGATTGCTGGAAAAGAATATCCTCTTACTAGAGCGCATTTT
CTTTCCCCAAATTAG

Peptide Sequence

PEP ID

Solyc05g056340.3.1
PEP Infomation

Peptidyl-prolyl cis-trans isomerase G isoform 1 (AHRD V3.3 *** A0A061FAS4_THECC)
Sequence

MSGTPNKRPHEDGGNGGSSNHSYSSAPKYSHDDSGAFPKVMSSGTPEYHASFDVGQNARM
PKIQRTESSRDADRRSPVLPMYRVSSCPVVSHPDHSVASENRLEPKEVNKDVKVENRDAK
SEIRELYQGTKSDKDDRFENRADDGKDIKNSRDTYPEYKGDVKTDKDRFSGVSWKDPKEQ
TRGKRYPDLPVPVGNMDPWHASRTHGAAEIGKEVSNSENRDFAKVREAVAENKMDLKGDD
KYKDKERKRKEGKHREWGERDKERNDCRNNLQLGNSTSDNKELLKEERESERWEKERNDL
SKDKDRPKDWEKDHAKREVWNGVEREVLQSEKEVIDVPGKTNEPENSTVEQKKQKDHDNW
KNTDRDGSERRKERDTDLEGERPEKRVRCHDKEPEEGDLDTEGGGEREREAFNYGVQQRK
RMSRPRGSPMANRDPRFRSHTHENEGSQVKHDVSAVNYRVGECMPELIKLWKEYESSKAD
EASDSSPSDPTLEIRIPAEHVSATNRQVRGGQLWGTDIYTNDSDLVAVLMHTGYCRTTAS
PLLPTITELRATIRVLPPQNCYISTLRNNVRSRAWGAAVGCSYRIERCSVVKKGGGTIDL
EPCLTHSSTLEPTLAPVAVERTMTTRAAASNALRQQRFVREVTIQFNLCNEPWLKYSISV
VADKGLKKALFTSSRLKKGEVLYLETHSKRYELCFSGEKMVKATTSLMHEMDVDKPQSHN
LHMANGEKNGVNGENTMVDMFRLSRCKKPLPQKLMQSVGIPLPLEHVEVLEENLEWENIQ
WSQTGVWIAGKEYPLTRAHFLSPN*

Transcript Sequence

Transcript ID

Solyc05g056340.3.1
Transcript Infomation

Peptidyl-prolyl cis-trans isomerase G isoform 1 (AHRD V3.3 *** A0A061FAS4_THECC)
Sequence

ACAAAACAAAAATTACAAGTAGGCGTTTTTGCTTATAAATTTTCTATTCCATTTCATACC
CTTCGTTAACTCTGTGCTTTAAATCAAGCAAATTGGCCTCTGGATTTTGTGTTCCTTACA
AAAATTTACAGAGAAAAAGATTGAATTTTTTCGCTCCTTCTTTTGCTGCATCTTCGCCGC
CGGTTGTGGTTCTTTAGGTTCCTTAATTTATATGCTGAAAAAGCCAGAATATGAGTGGTA
CTCCGAACAAAAGACCTCACGAGGATGGTGGAAATGGTGGGAGTAGTAACCATAGTTACT
CTTCTGCTCCAAAATACTCACATGATGACTCTGGTGCATTTCCCAAGGTGATGAGCTCAG
GAACACCTGAATATCATGCCTCCTTTGATGTGGGCCAGAATGCTCGGATGCCGAAGATTC
AACGGACTGAATCTTCACGAGATGCAGATAGAAGATCTCCTGTGCTTCCAATGTACCGTG
TCTCATCATGTCCAGTTGTTTCACATCCTGATCATTCTGTTGCTTCAGAAAATAGGTTGG
AGCCCAAGGAAGTTAACAAGGACGTCAAGGTTGAGAATCGTGATGCCAAAAGTGAAATAA
GGGAGTTGTACCAAGGGACTAAATCTGACAAGGATGATAGATTTGAGAACAGAGCTGATG
ATGGTAAGGACATTAAAAATAGTAGGGATACTTACCCTGAATACAAGGGAGATGTGAAGA
CAGATAAGGACAGGTTTAGCGGAGTGAGTTGGAAAGATCCGAAAGAACAGACCAGGGGAA
AAAGATATCCTGATCTCCCTGTTCCTGTCGGGAACATGGATCCATGGCATGCGTCAAGAA
CCCATGGTGCTGCTGAGATAGGAAAAGAAGTCTCAAATTCTGAGAACAGGGATTTTGCTA
AAGTGCGTGAAGCCGTTGCTGAAAATAAGATGGATTTGAAAGGTGACGATAAATACAAAG
ATAAAGAGAGAAAAAGGAAAGAAGGGAAGCACCGGGAATGGGGAGAAAGGGATAAAGAGA
GAAATGATTGTCGGAACAATTTACAACTAGGGAATAGCACTTCTGATAACAAGGAATTGC
TTAAAGAGGAAAGGGAATCTGAGCGGTGGGAGAAGGAAAGAAATGATCTTTCGAAGGATA
AGGACAGACCAAAGGACTGGGAAAAGGACCATGCAAAGAGGGAAGTGTGGAATGGAGTGG
AGAGGGAGGTTTTGCAGAGTGAGAAAGAAGTGATTGATGTTCCTGGAAAAACAAACGAGC
CGGAAAACTCAACAGTGGAGCAGAAGAAACAGAAAGATCATGATAACTGGAAAAATACTG
ACAGGGATGGAAGTGAGAGGAGAAAGGAAAGAGATACTGATTTGGAAGGAGAGAGGCCTG
AGAAACGTGTCAGGTGTCATGATAAAGAACCAGAGGAAGGGGACCTGGATACTGAAGGAG
GAGGAGAAAGGGAAAGAGAAGCTTTTAATTATGGAGTTCAGCAGCGCAAGAGAATGTCGC
GGCCAAGAGGGAGCCCCATGGCCAATCGCGATCCTCGTTTTAGGTCGCACACTCATGAAA
ATGAAGGATCTCAAGTGAAGCATGATGTATCTGCTGTCAATTACAGAGTTGGTGAGTGTA
TGCCAGAACTGATTAAATTATGGAAGGAATATGAATCATCCAAAGCAGATGAAGCATCTG
ATAGCTCTCCAAGTGATCCTACTCTAGAAATTAGGATTCCAGCTGAACACGTATCAGCTA
CAAATCGGCAGGTGAGAGGTGGCCAACTATGGGGAACAGATATATACACCAATGACTCGG
ATCTTGTCGCAGTTCTTATGCACACAGGTTACTGTCGTACAACTGCGTCTCCTCTTTTGC
CTACTATTACGGAGTTACGTGCTACTATCAGGGTACTACCTCCACAAAATTGCTACATAT
CTACTCTGAGGAACAATGTGCGATCACGTGCGTGGGGAGCTGCAGTTGGCTGCAGCTATC
GTATTGAGCGGTGCTCTGTTGTGAAGAAAGGAGGTGGAACAATCGATCTTGAACCTTGTC
TAACACATTCCTCAACCTTGGAGCCTACTCTTGCTCCGGTGGCGGTAGAGCGCACTATGA
CCACTCGAGCTGCAGCTTCGAATGCACTACGACAACAGAGGTTTGTACGTGAAGTGACAA
TTCAGTTCAACTTATGCAATGAGCCTTGGCTCAAATACAGTATCAGTGTTGTTGCTGACA
AGGGTCTAAAAAAGGCCCTTTTTACATCTTCACGCCTGAAGAAGGGAGAAGTTCTTTACT
TGGAAACTCATTCTAAGAGGTATGAGCTCTGTTTTAGTGGTGAAAAGATGGTTAAGGCTA
CAACTTCTCTGATGCATGAAATGGATGTTGACAAACCTCAAAGTCACAATTTACACATGG
CAAACGGAGAAAAAAATGGAGTGAATGGTGAGAATACGATGGTAGATATGTTCCGACTGT
CTCGTTGTAAGAAGCCCCTGCCTCAGAAACTAATGCAATCAGTTGGAATTCCTTTGCCCC
TTGAACATGTTGAGGTTTTGGAGGAGAATCTGGAGTGGGAAAACATTCAATGGTCACAAA
CTGGTGTTTGGATTGCTGGAAAAGAATATCCTCTTACTAGAGCGCATTTTCTTTCCCCAA
ATTAGGCAATGCTTTGTAATAGATACAGTTTATTCTATAAGACAAAGATGTATTGGGATT
TATACTGATTAGAATGATAAATTGTGGAACTCATGAACAATGTTGTTTTGTGAACATTGT
GCATATGTTGATTTCTTCTTCCAGCTT