Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc05g056330.3.1
CDS Infomation	Transposon protein, putative, CACTA, En/Spm sub-class (AHRD V3.3 - Q2QRE9_ORYSJ)
Sequence	ATGGATGATGTCGACATAGAATTGGATGAACTGGAATTAGTTGCTGCTGCTGCTGGTTAC CACTATTATAATTGTATAGCTAGGCAGCCTTCTCATGGTTCAACTCCTAAAGGGTCTGGG TTCTTGACCGAACTGCTCAGTGCCGACAATGATGTGTGTCGGGAAATGTTAAGGATGGAT AAACATGTTTTTCACAAGCTATGTAACATCCTTCGAGAAAGAGCCATGCTACGTGACACA GCTGGTGTTATGATAGAGGAGCAATTGGCAATATTTTTGAACATTGTTGGCCACAATGAA CGCAACAGGGTAATACAAGAGCGTTATCAGCACTCTGGTGAAACAATAAGCAGGCATTTT AATAATGTATTGAGGGCACTTAAGTCGTTATCGCGCGAGTTCCTTCAACTTCCTCCAGTC AGCACTCCTCTCCAGATCCTTGAAAGTAACAGATTCTACCCGTATTTTGAGGATTGCATT GGTGTCATCGATGGCATGCGTATCCCTGCTCATGTGCCAGCCAAGGATCAATCTCGTTTT CGTAATAGGAAGGGTATTTTGACCCAAAATGTATTGGCAGCGTGCACATTGGATCTCCAA TTTATATTTGTCTACCCTGGCTGGGAAGGCTCAGCTACAGATTCACGGGTACTGAGAGCA GTTCTCGATGATCCTGATCAAAACTTCCCTCCAATTCCTGAAGGGAAATATTATCTTGTT GATACAGGTTATGTTAATACGAATGGATTTATTGCTCCATTTCCAGGAATTCGATATCAT CTTCCTGAATATCGGGGTGCTAATCTATTACCTAGAAATGCAAACGAGTTATTTAACCAC CGGCATGCATCACTTAGAAATGCCATTCAGAAATCTTTTGATGTGCTGAAAACAAGATTT CCAATCCTCAAACTTGCTCCTCAATATGCTTTTCATACACAGAGGGACATTGTTATAGCT GCATGTGTTATTCACAATCACATCCGGCGTGAGGATAAGAGTGACTGGTTGTTTAAAGAC ATTGAAGGAAGATATGTAGAAGAGTTGCCTGATTTAGATGACAATCCTGATCCGCACTTG GCTTTTCAGATACAAGAACAGAGTGCCTCTGCATTGAGAGATTCCATTACAGCAGCAATG TGGAATGACTTCATCAATAAATGGGATGAGTGGTGA

Peptide Sequence

PEP ID	Solyc05g056330.3.1
PEP Infomation	Transposon protein, putative, CACTA, En/Spm sub-class (AHRD V3.3 - Q2QRE9_ORYSJ)
Sequence	MDDVDIELDELELVAAAAGYHYYNCIARQPSHGSTPKGSGFLTELLSADNDVCREMLRMD KHVFHKLCNILRERAMLRDTAGVMIEEQLAIFLNIVGHNERNRVIQERYQHSGETISRHF NNVLRALKSLSREFLQLPPVSTPLQILESNRFYPYFEDCIGVIDGMRIPAHVPAKDQSRF RNRKGILTQNVLAACTLDLQFIFVYPGWEGSATDSRVLRAVLDDPDQNFPPIPEGKYYLV DTGYVNTNGFIAPFPGIRYHLPEYRGANLLPRNANELFNHRHASLRNAIQKSFDVLKTRF PILKLAPQYAFHTQRDIVIAACVIHNHIRREDKSDWLFKDIEGRYVEELPDLDDNPDPHL AFQIQEQSASALRDSITAAMWNDFINKWDEW*

Transcript Sequence

Transcript ID	Solyc05g056330.3.1
Transcript Infomation	Transposon protein, putative, CACTA, En/Spm sub-class (AHRD V3.3 - Q2QRE9_ORYSJ)
Sequence	AAATAACGTAGTTAAAAGTGAACCTCAAAATATAAATACTTTTTTTGTTTTTGCATAGAA CATTCTTAAACCCTTCAAATGGCCTAAAGAAAAACCCCCAAAAATCCTTTTCATATAAAA GTTGCTTCTTTTACTTCAACTTTTGCACATTTGGATTCTCCAATACGAATTACTTCTCAG GAAAACAAGTACCTCACGGTGCTTCTATTTTGCTGTCAAATGATGGAAGAGACTGAAGCT ATATTTTTTTGATGAGTAGTCAAATTTTATCAACTATAAGGGCAAATAGCGTCCGTATAC TGTTCTAAACTTCAAATTGGTACATGACAGCTTAAAATGTTGATTTAATGATTATTCATG ATCAATTGACCAAAATTCATCATGTAGGACATTCTCTTTATACTTTTTAAAATCCATTTG GAGATATATACACCAAAGCATGGATGATGTCGACATAGAATTGGATGAACTGGAATTAGT TGCTGCTGCTGCTGGTTACCACTATTATAATTGTATAGCTAGGCAGCCTTCTCATGGTTC AACTCCTAAAGGGTCTGGGTTCTTGACCGAACTGCTCAGTGCCGACAATGATGTGTGTCG GGAAATGTTAAGGATGGATAAACATGTTTTTCACAAGCTATGTAACATCCTTCGAGAAAG AGCCATGCTACGTGACACAGCTGGTGTTATGATAGAGGAGCAATTGGCAATATTTTTGAA CATTGTTGGCCACAATGAACGCAACAGGGTAATACAAGAGCGTTATCAGCACTCTGGTGA AACAATAAGCAGGCATTTTAATAATGTATTGAGGGCACTTAAGTCGTTATCGCGCGAGTT CCTTCAACTTCCTCCAGTCAGCACTCCTCTCCAGATCCTTGAAAGTAACAGATTCTACCC GTATTTTGAGGATTGCATTGGTGTCATCGATGGCATGCGTATCCCTGCTCATGTGCCAGC CAAGGATCAATCTCGTTTTCGTAATAGGAAGGGTATTTTGACCCAAAATGTATTGGCAGC GTGCACATTGGATCTCCAATTTATATTTGTCTACCCTGGCTGGGAAGGCTCAGCTACAGA TTCACGGGTACTGAGAGCAGTTCTCGATGATCCTGATCAAAACTTCCCTCCAATTCCTGA AGGGAAATATTATCTTGTTGATACAGGTTATGTTAATACGAATGGATTTATTGCTCCATT TCCAGGAATTCGATATCATCTTCCTGAATATCGGGGTGCTAATCTATTACCTAGAAATGC AAACGAGTTATTTAACCACCGGCATGCATCACTTAGAAATGCCATTCAGAAATCTTTTGA TGTGCTGAAAACAAGATTTCCAATCCTCAAACTTGCTCCTCAATATGCTTTTCATACACA GAGGGACATTGTTATAGCTGCATGTGTTATTCACAATCACATCCGGCGTGAGGATAAGAG TGACTGGTTGTTTAAAGACATTGAAGGAAGATATGTAGAAGAGTTGCCTGATTTAGATGA CAATCCTGATCCGCACTTGGCTTTTCAGATACAAGAACAGAGTGCCTCTGCATTGAGAGA TTCCATTACAGCAGCAATGTGGAATGACTTCATCAATAAATGGGATGAGTGGTGATTCAT GCTTCTTGGAGAAAAGATGTGAATACTTTCATGTGTTCATGGGATGAGTGGAGAAAAGTT ATACCCCATATTCACAATATAATTTTCTTTTTGATAAAGGTGGCATTTGGGCTAGCTTCC GTACACCTAGACTAGTTCCACCGGGTACCTGCTGCTTCTCACCAGCAGTTACCGGGAGCG ATCTATTTTAGAACCTTATATGTATAAGATGCTGATTTTGATAGAGGTTTGGACCTGACT ACTGTCAAAGAGGAAAGGTAGAATTGGTGTTAGCCATAGTGAGAAGTGAGAAGCATTTAT TTTTGCTTTGTCATAGTAAGTTGTAATACTAGCAAGATAACACTTATGCTTCAACCTGTG AATCATCTTCTTTTCCTTTTTCTGTGCCCAAA