Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g056270.3.1
CDS Infomation

Isocitrate lyase (AHRD V3.3 *** A0A0K9PVT1_ZOSMR)
Sequence

ATGAATTCCGCATCAATTTCCAGCATAGAGTTCAGAACTTTCTCGAATCTTCCGTCACGC
CGAACTGCATACTTAACTCACCGGCGCGTAGCCGAGACGCTCCATCAAAGTGCTTCTTCA
TTGCCGGAAAGAGTAGGTAGCAGCAGTAGCAAAGCTGGAAGGAAATCATTTATTCGCTAC
ACTGTCTCTGCTAGCTATGGTGATAAGGAATCGGGTTCAGTTAACTCTAATGAGTTTACT
TCTCCAGCGAAGGCACTCCGGAAACTATTAGAATCGCCGGGAGTTCATCAAGGACCAGCT
TGTTTCGATGCTCTCAGTGCTAAGCTTGTTGAACGAGCTGGGTTCGATTTCTGCTTTACA
ACTGGTTTTGGAATATCTGCTGCACGGTTAGGACTGCCAGATGCAGGACTAATTTCTTAC
GGAGAGATGGTGGCTCAAGGTCTAGAGATCACACAAGCAGTGTCCATACCAGTAATTGGG
GATGGAGATAATGGATATGGCAACGCCATGAATGTCAAGAGAACTGTGAAAGGATATATT
AGAGCAGGTTTCGGGGGAATAATCCTTGAAGATCAGGTTTCTCCCAAAGCATGTGGTCAC
ACACGTGGCAGGAAAGTTGTTTCTCGGGAGGAAGCAATCATGAGAATAAAAGCGGCTGTT
GATGCTCGAAAAGAAAGTGGATCTGACATCGTGATTGTGGCACGTACTGATGCACGTCAA
GCAGTCTCCTTTGAAGAAGCCATTTGGCGGGCACGTGCTCTTGCTGATGCTGGAGCTGAT
GTTCTGTTCATAGATGCTCTTGCTTCCAAAGAAGAGATGAAAGCTTTCTGTGATGTCTAT
CCACTGGTTCCGAAGCTTGCAAATATGCTTGAAGGTGGTGGTAAAACACCAATATTCACT
CCAATTGAACTTGAGGAACTTGGATACAAACTGGTGGCATATCCACTTTCCTTGATTGGG
GTATCAATCGGTGCAATGCAGGATGCATTGTCTGCCATTAAAGGAGGTCGGATACCATCG
CCGGGTAGCATGCCTTCATTTGAAGAGCTAAAAGAGATCCTAGGTTTCAATACCTACTAT
GAAGAAGAGAAGCGTTATGCAACAACAAGCAGTCAACTTCCTTCTCGTAAAGGTGATTTC
TCATCAAACAGCAATGAGTATGGTGTTCAACCCGGCATCCAAGCTGATAGAGTGCAGAGG
ACTCAAATACCCGAGAATCCTGTTGAGGTATTGATACCTGAGGTGTATGACAGATTTTCT
GGTGAGGGTAAGAAAGGAAATTTCTCAATGGCCTGGTCTCGGAAATTGAGAGTCAAGATT
ACTGGAAAAGATGGATTTGAAAAACTAGATATCAGAATTCCTGCTGGATTTTTGGAAGGA
ATCACAAACATAGTTCCAGCTTTGGTAGGTGTAAACATCAAGTCTCTGTTGGATGAGGCA
ACTTTAGAAGAGGGTGGGAAACAATTGTTGGATTTTCAGGATACAATGGGTGACAGGATA
CAAGTTATTTTGGAGTAA

Peptide Sequence

PEP ID

Solyc05g056270.3.1
PEP Infomation

Isocitrate lyase (AHRD V3.3 *** A0A0K9PVT1_ZOSMR)
Sequence

MNSASISSIEFRTFSNLPSRRTAYLTHRRVAETLHQSASSLPERVGSSSSKAGRKSFIRY
TVSASYGDKESGSVNSNEFTSPAKALRKLLESPGVHQGPACFDALSAKLVERAGFDFCFT
TGFGISAARLGLPDAGLISYGEMVAQGLEITQAVSIPVIGDGDNGYGNAMNVKRTVKGYI
RAGFGGIILEDQVSPKACGHTRGRKVVSREEAIMRIKAAVDARKESGSDIVIVARTDARQ
AVSFEEAIWRARALADAGADVLFIDALASKEEMKAFCDVYPLVPKLANMLEGGGKTPIFT
PIELEELGYKLVAYPLSLIGVSIGAMQDALSAIKGGRIPSPGSMPSFEELKEILGFNTYY
EEEKRYATTSSQLPSRKGDFSSNSNEYGVQPGIQADRVQRTQIPENPVEVLIPEVYDRFS
GEGKKGNFSMAWSRKLRVKITGKDGFEKLDIRIPAGFLEGITNIVPALVGVNIKSLLDEA
TLEEGGKQLLDFQDTMGDRIQVILE*

Transcript Sequence

Transcript ID

Solyc05g056270.3.1
Transcript Infomation

Isocitrate lyase (AHRD V3.3 *** A0A0K9PVT1_ZOSMR)
Sequence

ATATCAATTTATTTTATCTTCTAACTTAATTTTCTAAATCAATGTTTAACCAAAAATCAC
CAAAACACTCCTAGTGGCTAGTTGATACACATTAAGAATATGTTTGATAAAAATTTAAAT
TTATTAGTAACAATAATTTGCAACAAATATATTTTCTTAAACTAATATCCATCTAAACAT
GCTGTTGTAGCTGTGATTGACAATGAATTCCGCATCAATTTCCAGCATAGAGTTCAGAAC
TTTCTCGAATCTTCCGTCACGCCGAACTGCATACTTAACTCACCGGCGCGTAGCCGAGAC
GCTCCATCAAAGTGCTTCTTCATTGCCGGAAAGAGTAGGTAGCAGCAGTAGCAAAGCTGG
AAGGAAATCATTTATTCGCTACACTGTCTCTGCTAGCTATGGTGATAAGGAATCGGGTTC
AGTTAACTCTAATGAGTTTACTTCTCCAGCGAAGGCACTCCGGAAACTATTAGAATCGCC
GGGAGTTCATCAAGGACCAGCTTGTTTCGATGCTCTCAGTGCTAAGCTTGTTGAACGAGC
TGGGTTCGATTTCTGCTTTACAACTGGTTTTGGAATATCTGCTGCACGGTTAGGACTGCC
AGATGCAGGACTAATTTCTTACGGAGAGATGGTGGCTCAAGGTCTAGAGATCACACAAGC
AGTGTCCATACCAGTAATTGGGGATGGAGATAATGGATATGGCAACGCCATGAATGTCAA
GAGAACTGTGAAAGGATATATTAGAGCAGGTTTCGGGGGAATAATCCTTGAAGATCAGGT
TTCTCCCAAAGCATGTGGTCACACACGTGGCAGGAAAGTTGTTTCTCGGGAGGAAGCAAT
CATGAGAATAAAAGCGGCTGTTGATGCTCGAAAAGAAAGTGGATCTGACATCGTGATTGT
GGCACGTACTGATGCACGTCAAGCAGTCTCCTTTGAAGAAGCCATTTGGCGGGCACGTGC
TCTTGCTGATGCTGGAGCTGATGTTCTGTTCATAGATGCTCTTGCTTCCAAAGAAGAGAT
GAAAGCTTTCTGTGATGTCTATCCACTGGTTCCGAAGCTTGCAAATATGCTTGAAGGTGG
TGGTAAAACACCAATATTCACTCCAATTGAACTTGAGGAACTTGGATACAAACTGGTGGC
ATATCCACTTTCCTTGATTGGGGTATCAATCGGTGCAATGCAGGATGCATTGTCTGCCAT
TAAAGGAGGTCGGATACCATCGCCGGGTAGCATGCCTTCATTTGAAGAGCTAAAAGAGAT
CCTAGGTTTCAATACCTACTATGAAGAAGAGAAGCGTTATGCAACAACAAGCAGTCAACT
TCCTTCTCGTAAAGGTGATTTCTCATCAAACAGCAATGAGTATGGTGTTCAACCCGGCAT
CCAAGCTGATAGAGTGCAGAGGACTCAAATACCCGAGAATCCTGTTGAGGTATTGATACC
TGAGGTGTATGACAGATTTTCTGGTGAGGGTAAGAAAGGAAATTTCTCAATGGCCTGGTC
TCGGAAATTGAGAGTCAAGATTACTGGAAAAGATGGATTTGAAAAACTAGATATCAGAAT
TCCTGCTGGATTTTTGGAAGGAATCACAAACATAGTTCCAGCTTTGGTAGGTGTAAACAT
CAAGTCTCTGTTGGATGAGGCAACTTTAGAAGAGGGTGGGAAACAATTGTTGGATTTTCA
GGATACAATGGGTGACAGGATACAAGTTATTTTGGAGTAAAGGAGATCTTGCTTCTTATT
CCTGTATTTTGATGAATGAATATTATATGGCAAATGATGTACAATCCCTAGCTTAGCTTG
GCCCCTCAGATT