Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g056230.3.1
CDS Infomation

Calreticulin (AHRD V3.3 *** G7KRL3_MEDTR)
Sequence

ATGGCTCTTTCCAAGAATGAAAAAAGAAAAAGTCTACTACTAGTCTCCTCACTTGAATCA
TTTCTACTAGTTTTGTTACTGTTTTCAATTATTACATCTTCATTATCTGAGATCTTCTTT
GAAGAACAATTTGATGATGATTGGCAGAGCAGATGGGTGAAGTCTGACTGGAAAAGGAGT
GAAGGGAAAGCAGGCTCCTTTAAGCATACAGCTGGGAAATGGGCTGGTGATCCTGATGAT
AAAGGTATTCAGACGTCAACCGATGCCAAACATTTCGCCATCTCTGCTAAGATACCAGAA
TTTAGCAACAAGAATAGAACATTGGTTGTACAGTACTCTATAAAGCTTGAGCAAGACATT
GAATGTGGTGGAGGTTACATAAAGCTTCTCTCTGGATATGTCAACCAGAAGAAGTTCGGG
GGAGATACTCCTTACAGTATGATGTTTGGACCGGATATCTGTGGTACACAGACGAAGAAA
CTTCATGTTATACTTTCCTACCAAGGCCAGAATTATCCAATCAAAAAGGATCTGCAATGT
GAGACAGACAAGTTAACCCATTTCTACACATTCATTCTTAGACCTGATGCATCATACAGC
ATCTGGATAGATGGCCGAGAGAGGGATTCTGGAAGCATGTATACAGACTGGGATATCTTT
CCCCCTCGAAAAATTAAAGATGTAAATGCGAAAAAGCCTGCAGATTGGGATGATAGAGAA
TATATAGAGGATCCAAACGAGGTCAAACCAGAGGGATATGAATCTATTCCAAAAGAGATC
CCTAACCCAAAAGCTAAAAAGCCTGATCACTGGGATGATGAAGAGGATGGCATCTGGAGA
CCACCAAAAATTCCTAACCCAGCATATAAGGGTCCATGGAAACGGAAGAAAGTGAAGAAC
CCTAACTATAAAGGTAAATGGAAGACCCCTTGGATCGATAATCCAGAATTTGAAGATGAT
CCTGATCTCTATGTGTTGAAGCCTATCAAATATGTTGGAATCGAAGTTTGGCAGGTGAAG
GCAGGTTCTCTATTTGACAACATACTGATATGTGATGACCCTGATTATGCAAAGAAAGTG
ATTGAGGAAGTCTTTGCTAATAGGGAGACTGAAAAGGAGGCTTTTGAGGAGGCAGAGAAA
GTGAGAAAAGCAAAAGAGGAAGAGCGCTATCGCCGTGATTATGATGATGACTATCATGAT
GAACTTTGA

Peptide Sequence

PEP ID

Solyc05g056230.3.1
PEP Infomation

Calreticulin (AHRD V3.3 *** G7KRL3_MEDTR)
Sequence

MALSKNEKRKSLLLVSSLESFLLVLLLFSIITSSLSEIFFEEQFDDDWQSRWVKSDWKRS
EGKAGSFKHTAGKWAGDPDDKGIQTSTDAKHFAISAKIPEFSNKNRTLVVQYSIKLEQDI
ECGGGYIKLLSGYVNQKKFGGDTPYSMMFGPDICGTQTKKLHVILSYQGQNYPIKKDLQC
ETDKLTHFYTFILRPDASYSIWIDGRERDSGSMYTDWDIFPPRKIKDVNAKKPADWDDRE
YIEDPNEVKPEGYESIPKEIPNPKAKKPDHWDDEEDGIWRPPKIPNPAYKGPWKRKKVKN
PNYKGKWKTPWIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSLFDNILICDDPDYAKKV
IEEVFANRETEKEAFEEAEKVRKAKEEERYRRDYDDDYHDEL*

Transcript Sequence

Transcript ID

Solyc05g056230.3.1
Transcript Infomation

Calreticulin (AHRD V3.3 *** G7KRL3_MEDTR)
Sequence

AAGACCACAGAATTCACACATTGGGCAAATGGCTCTTTCCAAGAATGAAAAAAGAAAAAG
TCTACTACTAGTCTCCTCACTTGAATCATTTCTACTAGTTTTGTTACTGTTTTCAATTAT
TACATCTTCATTATCTGAGATCTTCTTTGAAGAACAATTTGATGATGATTGGCAGAGCAG
ATGGGTGAAGTCTGACTGGAAAAGGAGTGAAGGGAAAGCAGGCTCCTTTAAGCATACAGC
TGGGAAATGGGCTGGTGATCCTGATGATAAAGGTATTCAGACGTCAACCGATGCCAAACA
TTTCGCCATCTCTGCTAAGATACCAGAATTTAGCAACAAGAATAGAACATTGGTTGTACA
GTACTCTATAAAGCTTGAGCAAGACATTGAATGTGGTGGAGGTTACATAAAGCTTCTCTC
TGGATATGTCAACCAGAAGAAGTTCGGGGGAGATACTCCTTACAGTATGATGTTTGGACC
GGATATCTGTGGTACACAGACGAAGAAACTTCATGTTATACTTTCCTACCAAGGCCAGAA
TTATCCAATCAAAAAGGATCTGCAATGTGAGACAGACAAGTTAACCCATTTCTACACATT
CATTCTTAGACCTGATGCATCATACAGCATCTGGATAGATGGCCGAGAGAGGGATTCTGG
AAGCATGTATACAGACTGGGATATCTTTCCCCCTCGAAAAATTAAAGATGTAAATGCGAA
AAAGCCTGCAGATTGGGATGATAGAGAATATATAGAGGATCCAAACGAGGTCAAACCAGA
GGGATATGAATCTATTCCAAAAGAGATCCCTAACCCAAAAGCTAAAAAGCCTGATCACTG
GGATGATGAAGAGGATGGCATCTGGAGACCACCAAAAATTCCTAACCCAGCATATAAGGG
TCCATGGAAACGGAAGAAAGTGAAGAACCCTAACTATAAAGGTAAATGGAAGACCCCTTG
GATCGATAATCCAGAATTTGAAGATGATCCTGATCTCTATGTGTTGAAGCCTATCAAATA
TGTTGGAATCGAAGTTTGGCAGGTGAAGGCAGGTTCTCTATTTGACAACATACTGATATG
TGATGACCCTGATTATGCAAAGAAAGTGATTGAGGAAGTCTTTGCTAATAGGGAGACTGA
AAAGGAGGCTTTTGAGGAGGCAGAGAAAGTGAGAAAAGCAAAAGAGGAAGAGCGCTATCG
CCGTGATTATGATGATGACTATCATGATGAACTTTGAACTTGGTGTAAAAGGCCACACAG
ACAGATGGTTCCACTCATTTGGGCTTTTTGTGTTCTTGTTGTATTCTAATCTTAACAGTA
ACTTTATTTTTGCATAGTCCAATGTGTTAGGCTTAAGACAAGAGAGATTGTACTATTTCC
ATCTTATTTAGCTTTTTTGGCAAAGCAAAACATGACTCAATATTTTAA