Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g056110.3.1
CDS Infomation

decapping 2 (AHRD V3.3 *** AT5G13570.1)
Sequence

ATGTCAGGGCTGAATCGATCTTCTAGCGCTCCATCGAAAAATGGGCTTCCTCCGAAGGAA
CTAATTGACGATCTTTGCAGTCGGTTTATTTTGAACGTGCCAAAAGAAGATCAGCAATCA
TTTGAGAGGATTTTGTTTCTCGTGGAGTGCGCACATTGGTTTTATGAAGACAATACTGTG
GACAACAATCCATCATTGAAGTCTATAACCCTCAAGGAATTTACATCCTTAATGTTTAAC
AATTGTGATGTTTTAAAACCATATGTTCCTCACATAGATGACATATTCAAGGACTTCACC
TCTTACAAGGTTCGAGTTCCTGTAACTGGGGCCATCATCCTTGATGAGACTTTTGAGCGG
TGCTTGCTAGTAAAGGGATGGAAGGGTTCAAGTTGGAGTTTTCCACGTGGGAAAAAGAAC
AAGGATGAAGAGGACCACTCATGTGCAGTTAGAGAAGTCTTGGAGGAAACAGGATTTGAT
GTCTCAAAACTTCTTCAGAAAGAGCAATACCTTGAAATGACTTTTGGACAGCAAAGAGTG
CGGCTTTACATAATAGCGGGAGTGAAAGAGGATGCATCATTTGCCCCACAAACCAAAAAA
GAAATTAGTGAAATTGCATGGCAAAGACTGGATGAACTTCAACCAGCAACTAACGAAATC
ATATCTCGTGGGATGACTGGACTCAAGCTCTACATGGTTTCTCCATTTTTATCATCTTTG
AGATCTTGGATTTCAGCACATCAGCCTCCTGTAGCTCCTAGATTTGATAGACCTTCAAGA
GGATTAAGTGTGTGGAATGCAAAAAATAGTTCCACCGGAAGCAGCTCAGTTTTAGCTGAG
ATTCAATTGAACAAACCTGCAGTTGATGCACGTCCCCAGGACACAGGTCCTGGCAAAAGC
TTCAGAAACTTCCGATTTGACACTGCTTCAATATATCGTGCAATGGAAGCTGGCTTCTCT
TCTTGA

Peptide Sequence

PEP ID

Solyc05g056110.3.1
PEP Infomation

decapping 2 (AHRD V3.3 *** AT5G13570.1)
Sequence

MSGLNRSSSAPSKNGLPPKELIDDLCSRFILNVPKEDQQSFERILFLVECAHWFYEDNTV
DNNPSLKSITLKEFTSLMFNNCDVLKPYVPHIDDIFKDFTSYKVRVPVTGAIILDETFER
CLLVKGWKGSSWSFPRGKKNKDEEDHSCAVREVLEETGFDVSKLLQKEQYLEMTFGQQRV
RLYIIAGVKEDASFAPQTKKEISEIAWQRLDELQPATNEIISRGMTGLKLYMVSPFLSSL
RSWISAHQPPVAPRFDRPSRGLSVWNAKNSSTGSSSVLAEIQLNKPAVDARPQDTGPGKS
FRNFRFDTASIYRAMEAGFSS*

Transcript Sequence

Transcript ID

Solyc05g056110.3.1
Transcript Infomation

decapping 2 (AHRD V3.3 *** AT5G13570.1)
Sequence

ATGCCGAAATATTTCACTTTATTCGGTATTAATTATAGTTAATTATATTAGTGTTATGAT
AAAGTGAAAAAAGTGAAGTAAATGGCAAATAATATGAAAGTTCCGAAAATACCCTCACCA
TCATCACTCAGTGAATTTCAACAAGCTGAGAACCAGAAAGAGGGAAAAATCAAGAGGAAG
AGCTTTTTTGTTTTCAGTTTCAATTTTAAGAAGAAAGCTCTATCCTCTTGACTTGTCTAT
TTTATACGTACAAAAATACGCAGTAGTATATGTATATACGTACGTCAAAATCTCCAGATC
GAAATTAGGGTTTTAGTTTTTTTTTTTTTTGAAAATTTTAGGTATCGGGAATGTCAGGGC
TGAATCGATCTTCTAGCGCTCCATCGAAAAATGGGCTTCCTCCGAAGGAACTAATTGACG
ATCTTTGCAGTCGGTTTATTTTGAACGTGCCAAAAGAAGATCAGCAATCATTTGAGAGGA
TTTTGTTTCTCGTGGAGTGCGCACATTGGTTTTATGAAGACAATACTGTGGACAACAATC
CATCATTGAAGTCTATAACCCTCAAGGAATTTACATCCTTAATGTTTAACAATTGTGATG
TTTTAAAACCATATGTTCCTCACATAGATGACATATTCAAGGACTTCACCTCTTACAAGG
TTCGAGTTCCTGTAACTGGGGCCATCATCCTTGATGAGACTTTTGAGCGGTGCTTGCTAG
TAAAGGGATGGAAGGGTTCAAGTTGGAGTTTTCCACGTGGGAAAAAGAACAAGGATGAAG
AGGACCACTCATGTGCAGTTAGAGAAGTCTTGGAGGAAACAGGATTTGATGTCTCAAAAC
TTCTTCAGAAAGAGCAATACCTTGAAATGACTTTTGGACAGCAAAGAGTGCGGCTTTACA
TAATAGCGGGAGTGAAAGAGGATGCATCATTTGCCCCACAAACCAAAAAAGAAATTAGTG
AAATTGCATGGCAAAGACTGGATGAACTTCAACCAGCAACTAACGAAATCATATCTCGTG
GGATGACTGGACTCAAGCTCTACATGGTTTCTCCATTTTTATCATCTTTGAGATCTTGGA
TTTCAGCACATCAGCCTCCTGTAGCTCCTAGATTTGATAGACCTTCAAGAGGATTAAGTG
TGTGGAATGCAAAAAATAGTTCCACCGGAAGCAGCTCAGTTTTAGCTGAGATTCAATTGA
ACAAACCTGCAGTTGATGCACGTCCCCAGGACACAGGTCCTGGCAAAAGCTTCAGAAACT
TCCGATTTGACACTGCTTCAATATATCGTGCAATGGAAGCTGGCTTCTCTTCTTGAAGTG
TAGAGTGTAGTCGTGGTTAATTGTTGTGTTTCATGTGCACATATTTTGTTTAGCTCCCCG
TCTTCACTACAAGGAAATCTAGGACTCTTCATGTTAATCCTGCTTAGACAAGTTCATAGT
TTTGTGGCTGTTCTTTTTTGCTTTCAGGTTTGGGTTGTATGTATAGTATGTATATACAAG
AACCTTGTATTGAATAGTCACCATGTTGTTTGAAGTTAATACAAAAAACACTCCTTTTTA
TTTGGACACCACCTTAGCAGTGCTGACCAACCTCTCAAATATCTTGGAAGAGTTTGCTTT
GTATTTTGTAGGAAATGCTAAATCAAACAAGTTTGTCAATTCAACCCAAAAGCTGGAGGG
GAATCTGGTTGCTGCTTATGACATAATACAAGGTAAAGACAGGAAGATGTCCTAGACCAG
ATCTAAAAGTAGTATATGCTGGCAATGATGCTCCTACTCTTTGTGAAACTTCCTGTAAGA
GATTCTTATATACGCCTGTCTCATCCTACAAATCATGGGCATACAGAAATTAGAAACCAA
AATGCCATTCAGAAGCAACCACAAAGGTTTGTTCTTTCATATCTAAGTCTAAGTGTCCTA
TATTAATTTAAAACAATTAGGTACTACATAAAATCAATGGAGGCCATATTTTATTGTGAT
GATGTTGAGCTCACTTGCACCTGTGCTATCATTTTTTACTGCAACAAAAACTTTGATATT
AGTTGGAAAATCTAAGATTTGTTTTAACACTAAATATACTTAACAACAAGATTATCATGA
TACAGAAATGATGCAACTTTACATCTTGAGTCTAACTACCTACAGGACTATCAGAAGTTG
GCAATGATGCAACTTTACATATTGCGTCTAACTACCTACAGGACCATCACAAGTTGGCAA
TGTCCTCCAGAAGTTCTGGACTCAGATCTGACCGTCTTATATTAGAACCCTAACAACAGA
AGCACCATCTTCAGACTACTATGGTAGCTTGACTGACCTAAAGGTTTTGAACAGTCATTT
AGTGAATGTAATGTAGTACCCAGTCTAGACTACAAGATACATGGCTTCTAGGTTGGCCAT
ACAAAAAGTTCCTACCTAATACTGGTGCTTAAGTTTATTCACGTTGCACAGTGCGAAAAA
CTAAGAATTCTAATGCCTGAAAACAAGGGAAAACAGTCAGAAGAGGACTACTAACAAATC
AATATTCCTTTTTTTGTAAGGACAAACAGATATATTAAGATAATGACTCCAGAAATGCCA
CAACATCTACCCTCTACTTCACTTACAAAAGGAAATCACAAGAAAATCACCATTCCATAC
ATTTGTAACTTCCATGAAAACATGCCTAAAATTACTAGTTATTGTTTTCACCCAACCCAT
ACCTAAGCCAGTACTATAAACTGCTCATTATTAACAGCCACATAACAGGGAGCTCTGCTT
CCCTCCTGAACTATGACAAGTTCACGAAATTCATCATAGTTAACTACATTGGCCATCAAC
CTACGACAGAAATTTGGGACTGAATATGCTTTCCGAAGCACACATAGGCAGATAATTCCC
ATAAATCAAACTAGGAAAAAACAAGAAGAGAAAAGGAAATATCTATAAAAGGAAAAATTG
CAAATACTGATCAAGAAACTAAAGTAAACTAATAATATCACAACCTCACACAACTAGACT
TCTTAGATCATCTTAGTACAAATGACCAATATTTATTAACTTTTCTCTAATGTAAGTGTC
CGGGCTAGTTTATGTGCACATGAGTCCAGACTAATCCGATCGGTACAGCGTGCCAGCTAC
CCACCCCCAGGGTAATTAGCACACCAAGGGTTTAGAAAACCAATGGTCCCTGAAACCTAG
AAAATTCACAAATGCAAATACAACAACATACTCAATCCCACAAATGAATATACATTAAAT
CTAAAAGTTGTAGCTTATAAGATCAAATGACGTCATTCATTTTCAAAAAGCCAAACTCAG
AAGAAAAAGCATAATTAAGAAAGCAAACTAAAAATCCCGCTAAAATCGGGGGTCAAAAAT
ACCAGAATTCTAGCAGCAAGCGAGTTGGAGGGACCTCGATTAGAGAGTGAATTCAACGCA
ACCTCAGCAGCAGAGTGTTCAGCCTGTCGAAGTGTAGAGCAGTAATTTGGACTCTCAAAC
ACCTCACCATTGAAATTAACCGTAGCCTTAAACCTAGGCGCATGATCCGGACCTTCCCTT
ATACAAGTATACGACGGCAAGTTGAAGCAACTCCTTTGTGCCAGTTCCTGTAACTGGTTC
TTATACATTTCCAGAAGCTTTCAACAAACAAGTTTAAATTCAACACAACAACAGCCAGGA
ACAAGGATCAAAGAAATGAAATGGAAAAACAAGGAATCAGCGGATATCAATGCGATGAAT
CGGAGCTCCGATTACTCTCGCCGTCGGCATCGTCGACGGAGGAGGATCGCAGGGCTGCTA
GGGTTTTTGTATGTATATGTGTATATATATATAAATATT