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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g056070.3.1
CDS Infomation

photosystem 1 protein
Sequence

ATGGCTTCTAATACATTGATGAGTTGTGGAATTCCAGCTGTTTGCCCCTCTTTCCTCTCT
TCTACCAAGTCCAAATTCGCCGCCGCGATGCCGGTGTCCGTTGGAGCTACCAACTCCATG
TCTCGGTTCTCCATGTCAGCTGATTGGATGCCCGGGCAGCCCCGTCCATCTTACCTCGAC
GGCTCAGCCCCCGGAGATTTTGGATTTGATCCACTTGGTTTAGGAGAAGTACCTGCAAAT
TTGGAAAGATACAAAGAATCTGAACTTATTCATTGCAGATGGGCTATGCTTGCTGTTCCC
GGAATCATAGTACCAGAGGCATTGGGCTTAGGTAATTGGGTCAAGGCCCAAGAATGGGCA
GCCATTCCTGGTGGACAAGCTACATATTTGGGCCAGCCTGTTCCATGGGGAACACTTCCT
ACTATTTTGGCTATTGAATTTCTAGCCATAGCTTTTGTAGAACACCAAAGGAGTATGGAA
AAAGATTCAGAAAAGAAGAAGTACCCTGGTGGGGCTTTTGACCCATTGGGCTACTCTAAA
GACCCTGCTAAATTTGAAGAACTCAAAGTCAAGGAAATCAAGAATGGTCGTCTTGCATTG
TTGGCATTTGTGGGATTTTGTGTACAACAATCAGCATATCCAGGAACAGGACCATTGGAG
AACTTGGCAACTCACTTGGCTGACCCATGGCACAACAACATTGGGGATGTTATTATCCCT
AAAGGCATTTTCCCTAATTAA

Peptide Sequence

PEP ID

Solyc05g056070.3.1
PEP Infomation

photosystem 1 protein
Sequence

MASNTLMSCGIPAVCPSFLSSTKSKFAAAMPVSVGATNSMSRFSMSADWMPGQPRPSYLD
GSAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEALGLGNWVKAQEWA
AIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYSK
DPAKFEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDVIIP
KGIFPN*

Transcript Sequence

Transcript ID

Solyc05g056070.3.1
Transcript Infomation

photosystem 1 protein
Sequence

ACAATTACACCAATTTTTTTTCATTCTCATATCCAAACTTTTTTTTGTACATCTTTTAAT
TACCAAAAAAAAAAGAGGAAGAAGATATGGCTTCTAATACATTGATGAGTTGTGGAATTC
CAGCTGTTTGCCCCTCTTTCCTCTCTTCTACCAAGTCCAAATTCGCCGCCGCGATGCCGG
TGTCCGTTGGAGCTACCAACTCCATGTCTCGGTTCTCCATGTCAGCTGATTGGATGCCCG
GGCAGCCCCGTCCATCTTACCTCGACGGCTCAGCCCCCGGAGATTTTGGATTTGATCCAC
TTGGTTTAGGAGAAGTACCTGCAAATTTGGAAAGATACAAAGAATCTGAACTTATTCATT
GCAGATGGGCTATGCTTGCTGTTCCCGGAATCATAGTACCAGAGGCATTGGGCTTAGGTA
ATTGGGTCAAGGCCCAAGAATGGGCAGCCATTCCTGGTGGACAAGCTACATATTTGGGCC
AGCCTGTTCCATGGGGAACACTTCCTACTATTTTGGCTATTGAATTTCTAGCCATAGCTT
TTGTAGAACACCAAAGGAGTATGGAAAAAGATTCAGAAAAGAAGAAGTACCCTGGTGGGG
CTTTTGACCCATTGGGCTACTCTAAAGACCCTGCTAAATTTGAAGAACTCAAAGTCAAGG
AAATCAAGAATGGTCGTCTTGCATTGTTGGCATTTGTGGGATTTTGTGTACAACAATCAG
CATATCCAGGAACAGGACCATTGGAGAACTTGGCAACTCACTTGGCTGACCCATGGCACA
ACAACATTGGGGATGTTATTATCCCTAAAGGCATTTTCCCTAATTAA