Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g055940.3.1
CDS Infomation

Myb-like transcription factor family protein (AHRD V3.3 *** G7KXD8_MEDTR)
Sequence

ATGAACACGCGCCGTGCATTAGGTATTCAAAGATCTAGTGAAACACAGCACAGTAATATG
GGTGTCTGTGGAGCTATGTCGACATCTTTGTCCATTTTGCCGTCATTTGAAGAGAAGCAT
CTTAAAGTGACAGATTCTCTTCATGTGCTCACAGAAAAGGAACAAACCACAAACCTTATT
TCCTCACGGGCAATCCCGTCTGCATCTAAAAGTGGAACAGTAGGGCATCTGTTATCTTCC
ACTTCTGGACCCCACAAACATTTTCACTTTTCTTCAACCCCCTCTCGAGAAAGTAGGAAA
CATAACTATCCATTTATTTCTAGTGAAGCTTCTGCAGCAACCTGCCAATCTTCACTCTCA
AACATTCATTCGACATCATTGGATAATTACCCCATGGAGAACAGCAATAATTCCTGGGGC
GAAGATGCATATCATGACTGTATAAATTTTTCTACTAATGTTCCTGTTCAGAATGACCAA
GTCGAAAGCCTTGCAGTAGTCATGACGTCTGATGACCAGGTTAAGAGATCTGATTGGCAG
GACTGGGCTGATCAGCTAATTAATGATGATGATGTTTTGGATTCGAGCTGGAGCAATATT
CTTGTTGATATCAATCCTCCAGACACTAAGTTTCTGAGAGCATCTGAAGTCCATGCTGGC
CAGTCCGATACTCTTCCTCCTCCTCTTCCTGCTGCTGCTGCATCGTCTGGGCAAAACTAC
CCAGTTGGTAGCCCATCGTCTACCGCAGCACAGACGAAACCTCGGATGCGATGGACACCC
GAGCTTCACGAAGTCTTTGTAGAAGCTATCAGTAAGCTTGGTGGGAGCGAAAAAGCTACA
CCAAAGGGAGTCTTGAAGCTCATGAATGTTGAAGGCCTAACCATCTATCATGTCAAAAGC
CACTTACAGAAATATAGAACTGCCAGATACAAACCAGAATCCTCGGAAGGAACACCGGAA
AAGAAGACCACCAGTGTGACAGAGATGCCATCTTTGGACCTGATAACGACCATGGGGATA
ACAGAAGCACTAAGAATGCAGATGGAAGTCCAAAAGCAGCTTCACGAACAACTTGAGATC
CAGAGAAAGTTGCAGTTGCGGATCGAAGAACAAGGTAAATACCTTGAAATGATGTTTGAG
AAGACAAAGGACATAGGAAAAGATCTAAAGGTATCATCATCATCAAGAACAGATGAACAT
CCTTCACCATCCAATAAGATGAAGCATACATCTCCCAACGACTAA

Peptide Sequence

PEP ID

Solyc05g055940.3.1
PEP Infomation

Myb-like transcription factor family protein (AHRD V3.3 *** G7KXD8_MEDTR)
Sequence

MNTRRALGIQRSSETQHSNMGVCGAMSTSLSILPSFEEKHLKVTDSLHVLTEKEQTTNLI
SSRAIPSASKSGTVGHLLSSTSGPHKHFHFSSTPSRESRKHNYPFISSEASAATCQSSLS
NIHSTSLDNYPMENSNNSWGEDAYHDCINFSTNVPVQNDQVESLAVVMTSDDQVKRSDWQ
DWADQLINDDDVLDSSWSNILVDINPPDTKFLRASEVHAGQSDTLPPPLPAAAASSGQNY
PVGSPSSTAAQTKPRMRWTPELHEVFVEAISKLGGSEKATPKGVLKLMNVEGLTIYHVKS
HLQKYRTARYKPESSEGTPEKKTTSVTEMPSLDLITTMGITEALRMQMEVQKQLHEQLEI
QRKLQLRIEEQGKYLEMMFEKTKDIGKDLKVSSSSRTDEHPSPSNKMKHTSPND*

Transcript Sequence

Transcript ID

Solyc05g055940.3.1
Transcript Infomation

Myb-like transcription factor family protein (AHRD V3.3 *** G7KXD8_MEDTR)
Sequence

TAACAAATTGAGAAGAGTCCCCATCTAAAAAATGTGTGATCCAAATCATTTCTTATACAT
TAAATATCAAATATTAAATTAAAAGATAAGTCAATTCATAGGCCATAGCAAGACTTCATG
ATCAATAAAGAGATATGCAATGCTATACAAGTTAAATCGCAATTTTTTTCTTTGAAATAA
TTTATTTTCATAGTATTTAAGATCATATGCTTTTCAAATCTTGTAAGAAATAAATTAATA
ATATTTTTTGATATGATGTTTGTTAGGAATTGATTATCTTTATTAGATTTACGTACTATA
AAAATAAATAAAGAATATCTTTTAAAAAAATATTTTCATAATAGTTGATCTAGAAGAATT
TAAATAGAGTAATATGAACAGTGAAGATTCCTATAGGTAAATCGATGCAATTATTATTAC
GAGTGGAGTGATAAATTTATCTACAAGTTTAACAAAAATATATAATTTCGAGTTTAATAT
TACATTATGTTTCAAAATTTATTTAATACGCATAAATTCAATTTTTAATAAATTTTTAAA
AAAATCATAAATTTAAAATTCTTACTTTACCCTTGAAAATTGTTTTTGTTTATCACATTC
TAACTTAGAATATGAAGAGTTTTACATCTACATTAGCATGCATTTAAAATTGCACAACAT
TATAAAAATCAACTCTGTCGTATAAATTGAAATAAATAAAATATTATTACTATTTTAAGT
TCATATAATATAGAATTTATTAGTTTTTTATGAAAAAAATTTTCATATCCAAAATTAGAA
TCGGACTATTGAATCCCACTTGTGTGATTGATGCCCCAATATTGGTGTAGAGGGGTAGGG
TGACAACAAAAGAGCTGACATAATCTTATTTTTCTTTTCAAAAATCAATCATTCAATCAA
ATATTTTTTTTGGTAAATCATCAAAAGAGAGATAAATTGGAATCTTTCTATTAAAAACAA
GCATGTACTCACAATTTTTTTCCCTAAAGTCTTGAGCTTTTGCAAATTTGTTTCTCTTTG
AGTCCGCCATTTTTCTAGCTCCAAACGAATTCTTTGTCAAATTCTTGGATTTTAAGATGT
ATGGTGTACAAGTTTGAGAACCGTCATTGTAAAATTTGTCTTTTGACTGAGTGACACCAC
GGAGTGGGTTGAAACTGTTGTGTTAATCTTAAAGTCTTTATTAATTCAATTTATGGGGAA
AAATGAACACGCGCCGTGCATTAGGTATTCAAAGATCTAGTGAAACACAGCACAGTAATA
TGGGTGTCTGTGGAGCTATGTCGACATCTTTGTCCATTTTGCCGTCATTTGAAGAGAAGC
ATCTTAAAGTGACAGATTCTCTTCATGTGCTCACAGAAAAGGAACAAACCACAAACCTTA
TTTCCTCACGGGCAATCCCGTCTGCATCTAAAAGTGGAACAGTAGGGCATCTGTTATCTT
CCACTTCTGGACCCCACAAACATTTTCACTTTTCTTCAACCCCCTCTCGAGAAAGTAGGA
AACATAACTATCCATTTATTTCTAGTGAAGCTTCTGCAGCAACCTGCCAATCTTCACTCT
CAAACATTCATTCGACATCATTGGATAATTACCCCATGGAGAACAGCAATAATTCCTGGG
GCGAAGATGCATATCATGACTGTATAAATTTTTCTACTAATGTTCCTGTTCAGAATGACC
AAGTCGAAAGCCTTGCAGTAGTCATGACGTCTGATGACCAGGTTAAGAGATCTGATTGGC
AGGACTGGGCTGATCAGCTAATTAATGATGATGATGTTTTGGATTCGAGCTGGAGCAATA
TTCTTGTTGATATCAATCCTCCAGACACTAAGTTTCTGAGAGCATCTGAAGTCCATGCTG
GCCAGTCCGATACTCTTCCTCCTCCTCTTCCTGCTGCTGCTGCATCGTCTGGGCAAAACT
ACCCAGTTGGTAGCCCATCGTCTACCGCAGCACAGACGAAACCTCGGATGCGATGGACAC
CCGAGCTTCACGAAGTCTTTGTAGAAGCTATCAGTAAGCTTGGTGGGAGCGAAAAAGCTA
CACCAAAGGGAGTCTTGAAGCTCATGAATGTTGAAGGCCTAACCATCTATCATGTCAAAA
GCCACTTACAGAAATATAGAACTGCCAGATACAAACCAGAATCCTCGGAAGGAACACCGG
AAAAGAAGACCACCAGTGTGACAGAGATGCCATCTTTGGACCTGATAACGACCATGGGGA
TAACAGAAGCACTAAGAATGCAGATGGAAGTCCAAAAGCAGCTTCACGAACAACTTGAGA
TCCAGAGAAAGTTGCAGTTGCGGATCGAAGAACAAGGTAAATACCTTGAAATGATGTTTG
AGAAGACAAAGGACATAGGAAAAGATCTAAAGGTATCATCATCATCAAGAACAGATGAAC
ATCCTTCACCATCCAATAAGATGAAGCATACATCTCCCAACGACTAATCAGAAGCACTCG
AGAAAGATCGTTTGTGGAACTCACCAGACAAAAAAGCTCATGAAGATCATGACTCAGATG
ATAGAGACTTGTGTTGTTCACCTACATCGAAACGAGCAAAAACAGAGGAAATATCAGGTC
TTCATGAATCTTGACAGACTCATTTGATATGTGAATTGTCTTTGCAAAATGCTGTTGACT
TGATGAAAGCTTTTGGCTAATAATTGTGTCATTTTTCCTTGTTTCATTCTCTTTTTTCCC
CGACCTTAAGGATCAACTGTGTTCTTCACTAATCATGGCATGACTTGAATCATCATCTCG
TAGGTTTACGAGTATGCTAATAGACACAGGATCTTTCTGTCCTATAAGAAAGTAGCTTGT
CTGTCGTACTGACTGTTTCATTGAATGTTTCAATCATCATTCTCTATAGGC