Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc05g055880.3.1
CDS Infomation	NOP56-like pre RNA processing ribonucleoprotein (AHRD V3.3 *** AT5G27120.1)
Sequence	ATGCTAGTATTGTTCGAAACGCCGGCAGGCTTTGCACTTTTCAAAGTACTTGATGAAGGA AAACTCTCTAAAGTTGAGGACTTGTCGAAAGAGTTTACGACGTCTGATTCTGCTAGAAAG GTTGTCAAATTGAAAGCTTTCTCTAAGTTTGAGAACACTTCAGAAGCACTCTCAGCAGCA ACTTTATTGATAGATAGCAAGCCTAGCAAAGGACTTCGAAAGTTTTTGAAAGCGCACTGT GATGGTGAAACACTGGGTATTGCTGATTCAAAACTTGGTAATGCGATTAAAGAGAAACTG CAAATTGAATGTGTTCACAATAATGTTGTGATGGAATTGATGAGAGGGTTGAGAAGTCAG TTAACTGAACTCATATCTGGTCTGGCCACTCAAGACTTGGCTCCAATGAGCTTGGGTTTG TCTCACAGTCTTTCAAGATACAAGCTGAAATTTAGTCCTGACAAGGTGGATACAATGATT GTCCAGGCCATTGGTTTGTTGGATGATCTTGATAAAGAGCTGAACACCTATGCAATGAGG GTACGAGAATGGTATGGCTGGCATTTTCCTGAGCTCGCAAAGATTGTACAAGATAACATC CTTTATGCTAAGGCGGTTAAGTTGATGGGTGACCGTGTCAATGCTGCAAAGCTTGATTTC TCTGAGTCAAATTCCGCTTTTGTGCTAGAACGTGATTTTACTTCTTTGACAGAAACTAAA ATTCATAATCTTGGTCGCTTACAGATACTTCCAGAAGAGGTTGAGGCTGAATTGAAAGAG GCAGCCATGATTTCAATGGGAACTGAAGTCAGTGATCTTGATCTGGAGAATATTAAAGAT TTATGCAGCCAAGTCCTGTCCTTCTCTGAGTACCGGGCTCAGTTGTATGATTATTTGAAG AGCAGAATGAATACCATTGCGCCAAATCTTACAGCTCTAGTGGGAGAACTTGTTGGAGCT CGCCTTATTGCGCATGGTGGCAGCTTGACAAATCTTGCGAAACAACCTGGAAGTACAGTA CAGATACTTGGTGCAGAAAAGGCGCTCTTTAGAGCTTTAAAGACGAAGCATGCTACTCCC AAGTACGGGCTTATATATCACGCGTCTTTGATCGGTCAGGCAGCTCCAAAACACAAGGGT AAAATCGCAAGATCTCTTGCCAGTAAAGCTTCTTTAGCAATTCGATATGATGCTCTTGGA GATGGCCAAGATAATACAATGGGTTTGGAGAATCGGGTCAAGCTCGAAGCACGATTAAGA GCTTTAGAAGGCAAAGAGTTGGGTAAATCAGCTGGTTCTGCTAAAGGGAAACCTAAAATC GAAGCTTATGACAAGGATCGTAAGAAGGGTGCTGGAGCATTAATAACACCAGCTAAGGTT TACAATCCTTCTGCTGATGCTGTTCTTGGTTGTATCGACAACGAGGAGCAAAAGATGAGT GTAGAAGAAACGGGGACGAAGAAGGAGAAGAAGAAAAAGAAGCATGCTGCTACTGAAGAA AATGTTGAAGTTGAAAAAAGCAAGAAAAAGAAGAGAAAACATAGTGATGATGATGATGAA AGTGAAACTGCTGATAAAAAGAAAGAGAAAAAGCAAAAGAAGAAGAAAACTGAAGAATAA

Peptide Sequence

PEP ID	Solyc05g055880.3.1
PEP Infomation	NOP56-like pre RNA processing ribonucleoprotein (AHRD V3.3 *** AT5G27120.1)
Sequence	MLVLFETPAGFALFKVLDEGKLSKVEDLSKEFTTSDSARKVVKLKAFSKFENTSEALSAA TLLIDSKPSKGLRKFLKAHCDGETLGIADSKLGNAIKEKLQIECVHNNVVMELMRGLRSQ LTELISGLATQDLAPMSLGLSHSLSRYKLKFSPDKVDTMIVQAIGLLDDLDKELNTYAMR VREWYGWHFPELAKIVQDNILYAKAVKLMGDRVNAAKLDFSESNSAFVLERDFTSLTETK IHNLGRLQILPEEVEAELKEAAMISMGTEVSDLDLENIKDLCSQVLSFSEYRAQLYDYLK SRMNTIAPNLTALVGELVGARLIAHGGSLTNLAKQPGSTVQILGAEKALFRALKTKHATP KYGLIYHASLIGQAAPKHKGKIARSLASKASLAIRYDALGDGQDNTMGLENRVKLEARLR ALEGKELGKSAGSAKGKPKIEAYDKDRKKGAGALITPAKVYNPSADAVLGCIDNEEQKMS VEETGTKKEKKKKKHAATEENVEVEKSKKKKRKHSDDDDESETADKKKEKKQKKKKTEE*

Transcript Sequence

Transcript ID	Solyc05g055880.3.1
Transcript Infomation	NOP56-like pre RNA processing ribonucleoprotein (AHRD V3.3 *** AT5G27120.1)
Sequence	ACAAGAAAATCTATTAAATATGTATGAACATTCAAATTTGACCCATTAACTAAGATGAGC TACCCAATCGATGGCAAGTTCAGAATCCAGAAACTTCAACTCCTCGCTCCGCCTATGAAC ATGTTCGGATTACCTAACAACTAAGACTTCTATATCCCTTGGTTCGGGATGACAATGGGG AAGAGTGGGGCCGGCTTGAGGTAAAACCACAAAGACTTCAAACCCCCCCGCTGAGTTAAA TTTTAACTGCCCCACCCCATTGTCATCCCTACCCTTGGTTTCTCCAAAAATTTAGCATAT GGGGTTTGAACTCAAGCTAAAAAAGTAAATAAAATAGAAAAAAAATAGACTTTTGCACAT CATATACATGAATTTCAGCACAGTGACAACAAATATGGACAAAAAAACGATTCTTGATTC ACATGACCAATAAATACTCCAATCTGAATCTACTAGCAGTAAGAATTGAGAAACAAACTA TAGAAGTGAAGAAAATTACCTCAAGACACTGAAAAATCAGTCTTTCTCTCCGTTTTAGGA GTTGGGCAGAGAAGAAGGAAATAGAGGGTTTAAGCCTTTTAGGGAAGCAGATAGTGAGGT ATAGAGAAAAGGGGATAGTATTGTAATTATACTTTATTATATTTGAGCAAATTGAAATAA TTTTATCATCATGAAACTATATTATAGTACTTGAATTGTAAAAAGTACAAAAAAAAAGAC AAAAGGGGTCAAACTTCCACCCTAAGTACAAAGTTGTTTCAAGTTTATATTTGGCCATTT TGCCCAACACTTCTTCCGCCGCTAACTTTTTACGCTCTTGTTGTGAACTTTCTCTACTTC TCTTTTCTACAAGGCAAATAGAATTGTATGTATTTTCTCTTCATTCATCTCACACACAAG AAAGACTTTTTCAACATTTTTTTTCACTGAAACGTGAATTTTCTTGAACTAGACTATAGT AGTTTGTAATGCTGTTTGATTTTGAGTTGTGAATTTTAAACAAGTTAATATACCTTTTTG TTGGAACCCCTTTTGATATTTATGCTTATCTTTAGGTGCATATTATGTTAAAGGAGTTTT CTTGAACTAAATTATAGTCTCTAATGCTGTTTGTGTATCAGTTGTGATACTAAAACAAGT TAATTTACTTTTTTGTGGAACCCCTTTTGATATTTATTCTTATAATAGGTGCATGTTGTG TTAAAGGAGTTTTCTTGAACTAGACTGTAATAGTCTGTGTTGCTGTTTTTGTATCAGTTG TGGAGTTTAACAAGTTAATAGGCTAATTTGTTGGAACCCTTTTGATATTTATGCTTTTAA TAGGTGCATGTTGTGTTAAAGGAGTTCTCTTGAACTAGACTGTAATAGTCTGTGTTGCTG TTTTTGTATCAGTTGTGGAGTTTAACAGGTTCTTATTGGAGTGAGAAAGCAGAAAAAATG CTAGTATTGTTCGAAACGCCGGCAGGCTTTGCACTTTTCAAAGTACTTGATGAAGGAAAA CTCTCTAAAGTTGAGGACTTGTCGAAAGAGTTTACGACGTCTGATTCTGCTAGAAAGGTT GTCAAATTGAAAGCTTTCTCTAAGTTTGAGAACACTTCAGAAGCACTCTCAGCAGCAACT TTATTGATAGATAGCAAGCCTAGCAAAGGACTTCGAAAGTTTTTGAAAGCGCACTGTGAT GGTGAAACACTGGGTATTGCTGATTCAAAACTTGGTAATGCGATTAAAGAGAAACTGCAA ATTGAATGTGTTCACAATAATGTTGTGATGGAATTGATGAGAGGGTTGAGAAGTCAGTTA ACTGAACTCATATCTGGTCTGGCCACTCAAGACTTGGCTCCAATGAGCTTGGGTTTGTCT CACAGTCTTTCAAGATACAAGCTGAAATTTAGTCCTGACAAGGTGGATACAATGATTGTC CAGGCCATTGGTTTGTTGGATGATCTTGATAAAGAGCTGAACACCTATGCAATGAGGGTA CGAGAATGGTATGGCTGGCATTTTCCTGAGCTCGCAAAGATTGTACAAGATAACATCCTT TATGCTAAGGCGGTTAAGTTGATGGGTGACCGTGTCAATGCTGCAAAGCTTGATTTCTCT GAGTCAAATTCCGCTTTTGTGCTAGAACGTGATTTTACTTCTTTGACAGAAACTAAAATT CATAATCTTGGTCGCTTACAGATACTTCCAGAAGAGGTTGAGGCTGAATTGAAAGAGGCA GCCATGATTTCAATGGGAACTGAAGTCAGTGATCTTGATCTGGAGAATATTAAAGATTTA TGCAGCCAAGTCCTGTCCTTCTCTGAGTACCGGGCTCAGTTGTATGATTATTTGAAGAGC AGAATGAATACCATTGCGCCAAATCTTACAGCTCTAGTGGGAGAACTTGTTGGAGCTCGC CTTATTGCGCATGGTGGCAGCTTGACAAATCTTGCGAAACAACCTGGAAGTACAGTACAG ATACTTGGTGCAGAAAAGGCGCTCTTTAGAGCTTTAAAGACGAAGCATGCTACTCCCAAG TACGGGCTTATATATCACGCGTCTTTGATCGGTCAGGCAGCTCCAAAACACAAGGGTAAA ATCGCAAGATCTCTTGCCAGTAAAGCTTCTTTAGCAATTCGATATGATGCTCTTGGAGAT GGCCAAGATAATACAATGGGTTTGGAGAATCGGGTCAAGCTCGAAGCACGATTAAGAGCT TTAGAAGGCAAAGAGTTGGGTAAATCAGCTGGTTCTGCTAAAGGGAAACCTAAAATCGAA GCTTATGACAAGGATCGTAAGAAGGGTGCTGGAGCATTAATAACACCAGCTAAGGTTTAC AATCCTTCTGCTGATGCTGTTCTTGGTTGTATCGACAACGAGGAGCAAAAGATGAGTGTA GAAGAAACGGGGACGAAGAAGGAGAAGAAGAAAAAGAAGCATGCTGCTACTGAAGAAAAT GTTGAAGTTGAAAAAAGCAAGAAAAAGAAGAGAAAACATAGTGATGATGATGATGAAAGT GAAACTGCTGATAAAAAGAAAGAGAAAAAGCAAAAGAAGAAGAAAACTGAAGAATAAGAT AGGACACAATACGTTAAAGGACTTTCTCTCGACGTCTCTCTTTTATCCAAGTTATTGATC TCGTATCTGTAAGTAAGTCCATTATTAGGCTTACACTAGTCCATGCCTTTCAACCTTGAT CCTTCCCTTAGACTTAAAAAGGCTCGTTACCTTGTTTCAACTGAACTCGTTGATTTCACG CTCTATCCTAGTTCTAGAACCTTCTCTTTCTCCAAGTCATTGTCAGTACTCAACCGGCAT TAACAATTTTGGTACTTAGGCATGGTTTAGTGTCTTAACTTAGTTTTTTGGCCTTTGTAA TGTGACTTTTAAAACAGATTTTTGGGCTGATCTACACATAATTTTGTCTTAGTATTCAAC AATTGGTATCAAAATCAACTTCATTGTATCATTAACATGTCATGTATTCAGGTCTTGTGG GAGAAGTTATACACACTTTTTCGTATTTTGTATTTCAAATATTTATTAACTAATTTCTCT ACACTTTTGAATTTTTTTTTTATAGCAATCGAGTGAGTAGTTTATATAAATAGCTCAAGC AAACAACGTATAAATAACTCGAAATATGTAACCAAGCATATAGGTGATAAGTAGCTTACG AGTAAGTCAAACGAACAATTTACAAGCAATTTTTGAAAAGTATTATCGATAACCTTTATT TGCAAGCAATTTTTAAAAAGTATTATAGATAAACTTTTATTTGTAAGCAACTTTTAAAAA ATATTGTAAACTTTTATTTGCAAAGTAACCTTTAGAAAATATTATAGACAACTTTTTGAA AAAAAATCAAGCAAAAGCTTCATTTCTTTTATATATATATAAACTACTTTTTGAAAAAAA ATCAAGCAAAAGCTTCATTTCTTTTATATATATATAAACTAAGTCATCACAAAACAAAAA AAGTGGCTTAGCTAATTTAAAATTTTAATTTTAAGAACTTTTTGAAAAATTGAACCACTC AGTTTAAAATCTATTAAAAAAAAGAAGAAGAAAAAAACTCTTTTTTAAAAAATAAATTTC TATTTTTTCCTTCTAGACTTTTTTTTTTTTCAAATTCTAAAACATATACACCTTAAAATC TCTTCAAAAAGGTTATCTTTTTATATTCTTTTTTTTAAAAACCTCTTATTTTTTATTCTG GTTCTTCTTCTTTTTTATTTTCAATAACAAC