Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g055860.3.1
CDS Infomation

Kinase family protein (AHRD V3.3 *** D7L628_ARALL)
Sequence

ATGAGTTGCCTCCCCTGCTTCAAGAAAAAAACCGAATCGTCGGAGGACGATGTGCCGGTT
GCTCAATCTAAAGGAATCTCAACCACGCCACCAAATCCTGGCATAACTTATGTTCACTTT
CTCCATGCATTTTGGATTAAACGACCAGCTGAACCATTTCACAAAGGCGACAATGCTGGT
GGAAACGTTAACAGTAATGCTAAAACTTACACATTCCGCGAGCTCGCGAGTGCAACAAAG
AATTTCAAGCAAGAATGCCTGATAGGTGAAGGTGGATTTGGAAGAGTGTTCAAGGGAACA
ATTCAAGGTGGAGAGATTGTGGCAGTGAAGCAACTAGACAGAAGTGGAACACAAGGAAAT
CAAGAGTTCATTGTTGAGGTCTCAAAGTTGACTCTCCTTAAGCACCAAAATCTGGTCAAT
CTCCTTGGATATTGTGCTGATGGTGATCAGAGGATTTTGGTCTACGAATATATGCCAATG
GGTTGCCTAAACGATCATCTGCTTGATCTCGAAGAGGATAAAAAGCCACTAGGTTGGCTA
TCAAGAATGAAGATAGCTTTAGGTGCTGCTAATGGACTCGAGTATCTACACGAAACGACC
AATCCACCGATAATTTATCGCGATTTGAAAGGCACAAACATTCTATTGGATAAAGATTTT
AATCCTAGACTTTCAGATTATGGTCTTTCTAAGCTTGCAGGTGGAGGGAGTAGGACAAAT
ATGTCACCGATGATGATGGGAACTGGTTATTGTGCTCCGGAGTTTGAAAAAAATGGTGAA
CACACTTTGAAGTCAGATGTATATTGTTTTGGAATTGTTTTGCTTGAACTTATAACAGGA
CGTCGAGCAGTGGATACTACAAGGCCAGCAGATGAGCAAAACTTAGTTGCTTGGGCACAA
CCTTATTTCAAGGATCCAAAGAAGTTCCATGAATTGGCTGACCCGCGTCTTGGGAAGAGT
TTTCCTGTCAAAGGTTTAAATCAAGCAGTTGGGGTTACAGCAATGTGTCTTCAAGACGAA
CCAATGGTTCGTCCTTTGATTGGTGATGTTGTGGCTGCTCTTACTTTTCTTACAATGCCC
CAGCCAGATGATCCTATTCCCAGTTCACCTCCAGCTCCAACCCCAACGTCAAATAATGAA
GATCAAGCGAGTTCCGAAAATGAGGACCAAGATTATTCAGATGATGAGGATCAGGGTTAT
TCTGATGAGGAGTATGAAGATAGTGAAAATGACGAACAAAATGATGAAAAAGTCCATGAC
AAACAACGCTCTCAAAAAGTTAGTGACAAACGAAAGTCTCAAAAAAATCGTGACAGTCAA
GAGGATGAGAAAGCAAGTTCAGAATATGGATATGGAAGTGCATCAGGATCTTCGGAATAT
GAGGACAGTGGAGATGGAGAAAAACCAAAAATAACAGCAAAATCTGCAAAATACGCTTCG
CATTCAAGACATAAAAGCAAGGTGAAATCTCGCACTAAAAGTACCAACTCAGGTACATCC
AACAGATAA

Peptide Sequence

PEP ID

Solyc05g055860.3.1
PEP Infomation

Kinase family protein (AHRD V3.3 *** D7L628_ARALL)
Sequence

MSCLPCFKKKTESSEDDVPVAQSKGISTTPPNPGITYVHFLHAFWIKRPAEPFHKGDNAG
GNVNSNAKTYTFRELASATKNFKQECLIGEGGFGRVFKGTIQGGEIVAVKQLDRSGTQGN
QEFIVEVSKLTLLKHQNLVNLLGYCADGDQRILVYEYMPMGCLNDHLLDLEEDKKPLGWL
SRMKIALGAANGLEYLHETTNPPIIYRDLKGTNILLDKDFNPRLSDYGLSKLAGGGSRTN
MSPMMMGTGYCAPEFEKNGEHTLKSDVYCFGIVLLELITGRRAVDTTRPADEQNLVAWAQ
PYFKDPKKFHELADPRLGKSFPVKGLNQAVGVTAMCLQDEPMVRPLIGDVVAALTFLTMP
QPDDPIPSSPPAPTPTSNNEDQASSENEDQDYSDDEDQGYSDEEYEDSENDEQNDEKVHD
KQRSQKVSDKRKSQKNRDSQEDEKASSEYGYGSASGSSEYEDSGDGEKPKITAKSAKYAS
HSRHKSKVKSRTKSTNSGTSNR*

Transcript Sequence

Transcript ID

Solyc05g055860.3.1
Transcript Infomation

Kinase family protein (AHRD V3.3 *** D7L628_ARALL)
Sequence

GCAAGATTATTCTACTTCTTTTTGTGCATTAGTTCATGATTTTTTTTGGAAAATATGACG
TTCTTCTTTTAACCTCAACTTTTATGACGTCCTAATATGATACTCATTACCTATATAGAA
TTAATGTCACTTTTTGAAAGTTAGTACCTAAGCTTTTCATATATATTAGTCCATGAATTT
TAAGATAACGTACTGACTTAATTTGATTCTAAATTTGTTGGTCCATTCAAAACAACCTAG
TGGATGATACTCATTGTTTCTTAACAATCAACGTCTCTTATTTTGAAGCTTATGGGTCAA
GAAATAAGAATTTAAGATTTTCATCATTTTTCGTATGTAATGCCCATGATTTATTTTTTT
GAAATACTACTAACCGACTTTGTTAACCCCCTCCCTCTCTAATTTTGCGAGTCTATTCGT
GACAATTTAGTAAAAGATTCTCATTGTTTTTCAAGAGTACTTCTTTCACGAAATAAGAAT
TTTGACTATCACAGTGTTTTGTATATAAATTTCCTGAAAATATGATTGATTCGACTCCGT
TTGGTCCTGAAATTTCGTAGGTCCATTTGTTGAAAACCTATTGAACAATACTCGTTATTT
ATACAAAATTAACGTCAACTTTTTAGAGTTTATGAGTCACGAAATAAAAGTTTAAGATTA
TCTCTAATTTTTTTATGTGTATTAATTTCTTAAAATATGACTAACCAACTAACTCCCAAA
TATGGATATTTTGAGATTTTTTTTTTAATTCATTTTTCAAAATATATTGTTCTACACCCC
ACCCCCCACACAAAAGAAAGGGGGAAAAACCAAAAAAAAAGGAGGTGGAAAGAAAACTTT
GTCCTTGCATCCTCTCCAAGTGATATTTTCTTTTCCTACAATTTCTAACACCACCTCAAC
CTCTAGGGAAAGAGACCCTCCCCCTCTCCATCTAAGTAGCCATCTCATCTAAAAAAATTT
GTCGTACGACTGGAGCTCAATATGAAATTTTATTTTTTTACAAGATCCGTATACGGAAAG
AAATACTATAGAAATTACATCGAAATAATATCTTTACGTTGACCCTTTCTTGAACAAAAA
CTGGGGGAGGATGAAAGGAAAAGGCCATTGCCATCCCTTTTCCTCCTCCTAATGTTTTTC
TTTTTTCTTCCCATTTTCTACCTAAAATCAAAAGCTTTTATGAACGTGATGGTCATGAAT
TCATGTACAACCATGCATTTGTATTTTTAAGTTAAAAAAAATTGGAATCTTGAGAGGAAC
AACGTGAAGAAATAATTAATTAAAAGAATAAAATAAAATTCTTGTAGACCTTTTCTTTCA
TTTGAGCTCCTTTGGTAAATAGACACAATTATTCATATATATATATTTCTTTGAAAAGAT
TTTATTTATTTTTTCTCTTTTCCTTGAGGGGATTGTGGATTTTTTTTCTTTTTTTGATTT
TTATTTTTTGATCTTTTGAGAGGATCAAGAACATGAGTTGCCTCCCCTGCTTCAAGAAAA
AAACCGAATCGTCGGAGGACGATGTGCCGGTTGCTCAATCTAAAGGAATCTCAACCACGC
CACCAAATCCTGGCATAACTTATGTTCACTTTCTCCATGCATTTTGGATTAAACGACCAG
CTGAACCATTTCACAAAGGCGACAATGCTGGTGGAAACGTTAACAGTAATGCTAAAACTT
ACACATTCCGCGAGCTCGCGAGTGCAACAAAGAATTTCAAGCAAGAATGCCTGATAGGTG
AAGGTGGATTTGGAAGAGTGTTCAAGGGAACAATTCAAGGTGGAGAGATTGTGGCAGTGA
AGCAACTAGACAGAAGTGGAACACAAGGAAATCAAGAGTTCATTGTTGAGGTCTCAAAGT
TGACTCTCCTTAAGCACCAAAATCTGGTCAATCTCCTTGGATATTGTGCTGATGGTGATC
AGAGGATTTTGGTCTACGAATATATGCCAATGGGTTGCCTAAACGATCATCTGCTTGATC
TCGAAGAGGATAAAAAGCCACTAGGTTGGCTATCAAGAATGAAGATAGCTTTAGGTGCTG
CTAATGGACTCGAGTATCTACACGAAACGACCAATCCACCGATAATTTATCGCGATTTGA
AAGGCACAAACATTCTATTGGATAAAGATTTTAATCCTAGACTTTCAGATTATGGTCTTT
CTAAGCTTGCAGGTGGAGGGAGTAGGACAAATATGTCACCGATGATGATGGGAACTGGTT
ATTGTGCTCCGGAGTTTGAAAAAAATGGTGAACACACTTTGAAGTCAGATGTATATTGTT
TTGGAATTGTTTTGCTTGAACTTATAACAGGACGTCGAGCAGTGGATACTACAAGGCCAG
CAGATGAGCAAAACTTAGTTGCTTGGGCACAACCTTATTTCAAGGATCCAAAGAAGTTCC
ATGAATTGGCTGACCCGCGTCTTGGGAAGAGTTTTCCTGTCAAAGGTTTAAATCAAGCAG
TTGGGGTTACAGCAATGTGTCTTCAAGACGAACCAATGGTTCGTCCTTTGATTGGTGATG
TTGTGGCTGCTCTTACTTTTCTTACAATGCCCCAGCCAGATGATCCTATTCCCAGTTCAC
CTCCAGCTCCAACCCCAACGTCAAATAATGAAGATCAAGCGAGTTCCGAAAATGAGGACC
AAGATTATTCAGATGATGAGGATCAGGGTTATTCTGATGAGGAGTATGAAGATAGTGAAA
ATGACGAACAAAATGATGAAAAAGTCCATGACAAACAACGCTCTCAAAAAGTTAGTGACA
AACGAAAGTCTCAAAAAAATCGTGACAGTCAAGAGGATGAGAAAGCAAGTTCAGAATATG
GATATGGAAGTGCATCAGGATCTTCGGAATATGAGGACAGTGGAGATGGAGAAAAACCAA
AAATAACAGCAAAATCTGCAAAATACGCTTCGCATTCAAGACATAAAAGCAAGGTGAAAT
CTCGCACTAAAAGTACCAACTCAGGTACATCCAACAGATAATAACACAAGGAACCATAAA
AAGAATGCAATTGTTGAATTTAATGTTGCAACAATGTCAATGATGCTTGCAAACATGGAA
CCAATTCAAGTTTAAGTCATGTAGAGAAATCAATTGAGCAAAAAACAAAAATCTAATGGA
GCAAGTCCTAGTACAAATTACAGAAGTAAAAGCAACATTGACACAAGTAATGTAATTATT
GATTTTGTTAAGACAACAAGCAGCTTACATTCTAATTATGAAAGTTTTGGCGCATATTCA
GGTCAGAATGCAACGAGGAAACAGAACGTTAAAGTAATTCGTTCTACTCATCCCAGAGTA
CATATTAGTAAAATATGTAACTGTACCTTGTAATTAACTTTTTTTTTCTTCATATTTTTC
ATTTTGACAAACTTAATTTTTACATTTTGGCTATGAGCACTGAACTTTTTTAATAAGTCG
ACTTACTACAAAATATTGCGGCTAGTGGATGGAGAGCTCAGAACTTTTTGGCTTTTATAA
GCTAATAAGTTTAGTATAGTACTCCCCT