Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc05g055830.3.1
CDS Infomation	R3H domain protein (AHRD V3.3 *** A0A072VLT6_MEDTR)
Sequence	ATGAGTCTTACGGAATTCGCTATGGTAGAGGAACTGGCCTTTCTTATCAAAGATAATCTT CCTTGCAAGCATCTTATCCTATCTATGGAGGAGACCCTAGTCAATTTCCTTCTCGATGAT ACCAGTTCTGATGGAATCTTGGAGCTTGAACCAACAAATCCATATAACCGCCTTCTCTTA CATCGTCTGGCTGATATTTTTGGGTTTTCTCATCAATCAGTTGGTGAAGGGGAAGAACGG CACTTGGTCTTGGAGCGTTGCTCAGATACATCAATACCTTCCATTCTCATTAGTGATCTC CTTTGGCAGTATGACGAACTCCAGTCTCCAAGGACTGTAGATGTGATATATAGAAGAAAA GAAAGTTCAGAAGGGTCAAAGGTAGAAGACACACCAATACCAATCATTAACCTTTCGCTT GAGGAGAGGGAAGAAGCTTATATGGCTGCCCGGAAACGGATTTTTTCTGTTGATCAAGGC GAGACTAGACAATGTATGAAGGATAGACCTCAAAAAGATCCTACGGTTGCTCGTCGTATG ATTGCACATGCACTTGGCCAAAGAACCAGGCCAGCTAACGTAGAGATCCAACATGCAAAT GCTGAGCAGTGTGAAGAACAATCCAAGGATGTAAATATCCCGTATAAGAAAGAAGGACTG ACAAATTTGGGCAAGCAGATTTGTACAGAGGTTAAAACTCCCGCTACAAAATATCCAGGT TCAGGTGGTAAGCCCAAAAACAACACATCAAATGGCAGTAGATCACCACATATGAAGAAG AACACACCTAAAAACATCGATGGAACAGGTTCATCGACACCAGTGAAAACAGACGTGAAG GTTCACAAAGATAGTATTCGTGAAGAACATATTGGTGCTGCTAAGAGAATATTTGCCAAT GCTCTAGGATTTGCAAGAGAAGGGAATCCGAAATAA

Peptide Sequence

PEP ID	Solyc05g055830.3.1
PEP Infomation	R3H domain protein (AHRD V3.3 *** A0A072VLT6_MEDTR)
Sequence	MSLTEFAMVEELAFLIKDNLPCKHLILSMEETLVNFLLDDTSSDGILELEPTNPYNRLLL HRLADIFGFSHQSVGEGEERHLVLERCSDTSIPSILISDLLWQYDELQSPRTVDVIYRRK ESSEGSKVEDTPIPIINLSLEEREEAYMAARKRIFSVDQGETRQCMKDRPQKDPTVARRM IAHALGQRTRPANVEIQHANAEQCEEQSKDVNIPYKKEGLTNLGKQICTEVKTPATKYPG SGGKPKNNTSNGSRSPHMKKNTPKNIDGTGSSTPVKTDVKVHKDSIREEHIGAAKRIFAN ALGFAREGNPK*

Transcript Sequence

Transcript ID	Solyc05g055830.3.1
Transcript Infomation	R3H domain protein (AHRD V3.3 *** A0A072VLT6_MEDTR)
Sequence	TTATTACAAGAAATCCTCAAAAGTCTTTAGCCTCTTTTCTTTCGCAAAATTTTCTTCAAA ATCAAGTGAAAAAAACTGAAAAAAATCCAAGAAAATTTCAGGGTTTTACACCCTTTACGA TTGTTGATCATTATCCACAATGAGTCTTACGGAATTCGCTATGGTAGAGGAACTGGCCTT TCTTATCAAAGATAATCTTCCTTGCAAGCATCTTATCCTATCTATGGAGGAGACCCTAGT CAATTTCCTTCTCGATGATACCAGTTCTGATGGAATCTTGGAGCTTGAACCAACAAATCC ATATAACCGCCTTCTCTTACATCGTCTGGCTGATATTTTTGGGTTTTCTCATCAATCAGT TGGTGAAGGGGAAGAACGGCACTTGGTCTTGGAGCGTTGCTCAGATACATCAATACCTTC CATTCTCATTAGTGATCTCCTTTGGCAGTATGACGAACTCCAGTCTCCAAGGACTGTAGA TGTGATATATAGAAGAAAAGAAAGTTCAGAAGGGTCAAAGGTAGAAGACACACCAATACC AATCATTAACCTTTCGCTTGAGGAGAGGGAAGAAGCTTATATGGCTGCCCGGAAACGGAT TTTTTCTGTTGATCAAGGCGAGACTAGACAATGTATGAAGGATAGACCTCAAAAAGATCC TACGGTTGCTCGTCGTATGATTGCACATGCACTTGGCCAAAGAACCAGGCCAGCTAACGT AGAGATCCAACATGCAAATGCTGAGCAGTGTGAAGAACAATCCAAGGATGTAAATATCCC GTATAAGAAAGAAGGACTGACAAATTTGGGCAAGCAGATTTGTACAGAGGTTAAAACTCC CGCTACAAAATATCCAGGTTCAGGTGGTAAGCCCAAAAACAACACATCAAATGGCAGTAG ATCACCACATATGAAGAAGAACACACCTAAAAACATCGATGGAACAGGTTCATCGACACC AGTGAAAACAGACGTGAAGGTTCACAAAGATAGTATTCGTGAAGAACATATTGGTGCTGC TAAGAGAATATTTGCCAATGCTCTAGGATTTGCAAGAGAAGGGAATCCGAAATAAGGAAC ATAATGTATTCTTCTTGAAATGCTTGAAGACTAGCCCAGCCACACATAACCATAGAAGTA AACGAATGATCTCGAGCACTTTATGATTGTCTTGTGAAACCTGTGCCCATGAGGAAACTG AACGGTTGTAATTTTGTACCAGCCCTTTGATAGCTGCATCGCATGAGTACAGCAAGGAAC TGTTGGAATATAGAATTGAAAGCTACTGAATCCAAGTTATCGACAAGCTTGAGGTTGTAA AGTTTGTCACACTGGCCTAGTTTGTCTGCATCATCCTATGTAGCCAGGGGCGGAGCTACT GTAACCCACTGGCTTTTCCGTATATTCATATTAAAATATCAAATAGAACGTAGATATGAA TTTCTTGCGAACCATCTAGCATGAGGAGGGCTCCAAGCACCCAGTAAAGTCTTTAAAAGT ACGTTTCCTGTTGCAACTAAAACCAATATCAGTCGCTGCTAAAACCTATAAACATCGCTG ACTGTATTAGTGGCAAGCAACTAAGGTCGTCGCTAAAACCTATCAATTTGTCAGTAAAAG TACTTGGCAATCACAGTCGCCGCTAAAAGTACTTTTAGTAGCAATCACAGTCGTAAACCT ACGAATGTTGTCGCT