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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g055780.3.1
CDS Infomation

DNA repair protein RecA, putative (AHRD V3.3 *** A0A072V2Z1_MEDTR)
Sequence

ATGGCGATGTTGCTGAGACTTATTAATCGCCGTGAACTTGCTTCTTCAGCCTATAAAAAT
TGTTTGAGCAAAAGCTTATTTGGGGTATCAGATCAACTATGTTACTTTTCTTCTAGAGGT
AAGAAAAAGTCAAATTCAGATGGCAGTGATTCAGGCGAAGAGAATTTGTCCAAGAAAGAC
TTGGCTTTGAAACATGCACTAGATCAGATCACGACATCATTTGGAAAGGGATCCATCATG
TGGCTTGGTCGCACTGTGTCCCCCAAACAAGTCCCTGTAGTGTCTACTGGATCTTTTTCT
TTGGATATTGCCCTTGGGATAGGGGGACTTCCAAAGGGACGCGTAATAGAGATATATGGT
CCAGAGGCTTCAGGGAAAACAACACTTGCTTTGCATGTAATTGCTGAGGCACAGAAACAA
GGAGGTTATTGTTGTTTTGTTGATGCTGAGCATGCTCTTAATCCAACATTGGCTGAGACC
ATTGGAGTAAATACTTCAAATTTACTTCTGTCTCAACCAGATTGTGGTGAGCAAGCTCTT
AGTCTGGTAGATACAATAATAAGGAGTGGTTCGGTTGATGTTGTTGTTGTGGACAGTGTA
AGGAAGATTGGAACTGTTGGTTCATGTTTCTTGGTTGCTGCCCTTGTCCCGAAAGGTGAG
CTTGAAGGTGAAATGGGAGATGCTCATATGGCGATGCAAGCTAGACTGATGAGTCAAGCA
CTCCGCAAGCTCAGTCATTCTCTATCGTTATCACAGACCATTTTAATCTTCATAAATCAG
GCAAGAGTCAGGTCAAAACTTTCAACTTTTGGGGGATTTGGAGGACCAAGTGAAGTTACT
TGTGGTGGTAATGCCTTGAAGTTCTATGCTTCTGTGCGTCTAAACATAAAACGAATTGGA
TTCGTCAAGAAGGGGGAAGAGACCATAGGAAGCCAAGTTCTTGTCAAGATTGTGAAGAAC
AAGCATGCTCCTCCCTTTAGAACTGCAGAATTCGAGCTTGAGTTTGGTAAAGGAATTTCT
CGTGAAGCTGAACTTATTGACTTGGGAGTCAAACATAAGTTCATTACAAAAGGTGGTGGT
GGTTATTACAATATCAACAATCAGAACTTTCGTGGTAGAGATGCTGTAAAACTTTTCCTA
TCGGAGAACACTAGTGCGAGGGAGGATCTTATGATGAAACTTCGAGAAAAGCTTATTGAC
CAAGGGGACAACGAAAAGGGACCTGATGTAGACCCTGTTGAGGAGGTTGTATTGAATGAT
ACCACTGATGAAGAAACCCCAACTGCAGTCGAGGCATGA

Peptide Sequence

PEP ID

Solyc05g055780.3.1
PEP Infomation

DNA repair protein RecA, putative (AHRD V3.3 *** A0A072V2Z1_MEDTR)
Sequence

MAMLLRLINRRELASSAYKNCLSKSLFGVSDQLCYFSSRGKKKSNSDGSDSGEENLSKKD
LALKHALDQITTSFGKGSIMWLGRTVSPKQVPVVSTGSFSLDIALGIGGLPKGRVIEIYG
PEASGKTTLALHVIAEAQKQGGYCCFVDAEHALNPTLAETIGVNTSNLLLSQPDCGEQAL
SLVDTIIRSGSVDVVVVDSVRKIGTVGSCFLVAALVPKGELEGEMGDAHMAMQARLMSQA
LRKLSHSLSLSQTILIFINQARVRSKLSTFGGFGGPSEVTCGGNALKFYASVRLNIKRIG
FVKKGEETIGSQVLVKIVKNKHAPPFRTAEFELEFGKGISREAELIDLGVKHKFITKGGG
GYYNINNQNFRGRDAVKLFLSENTSAREDLMMKLREKLIDQGDNEKGPDVDPVEEVVLND
TTDEETPTAVEA*

Transcript Sequence

Transcript ID

Solyc05g055780.3.1
Transcript Infomation

DNA repair protein RecA, putative (AHRD V3.3 *** A0A072V2Z1_MEDTR)
Sequence

AGTATCTATTTTTCCCTCTTAAACCTCTAAAACCCTAACAATGGCGATGTTGCTGAGACT
TATTAATCGCCGTGAACTTGCTTCTTCAGCCTATAAAAATTGTTTGAGCAAAAGCTTATT
TGGGGTATCAGATCAACTATGTTACTTTTCTTCTAGAGGTAAGAAAAAGTCAAATTCAGA
TGGCAGTGATTCAGGCGAAGAGAATTTGTCCAAGAAAGACTTGGCTTTGAAACATGCACT
AGATCAGATCACGACATCATTTGGAAAGGGATCCATCATGTGGCTTGGTCGCACTGTGTC
CCCCAAACAAGTCCCTGTAGTGTCTACTGGATCTTTTTCTTTGGATATTGCCCTTGGGAT
AGGGGGACTTCCAAAGGGACGCGTAATAGAGATATATGGTCCAGAGGCTTCAGGGAAAAC
AACACTTGCTTTGCATGTAATTGCTGAGGCACAGAAACAAGGAGGTTATTGTTGTTTTGT
TGATGCTGAGCATGCTCTTAATCCAACATTGGCTGAGACCATTGGAGTAAATACTTCAAA
TTTACTTCTGTCTCAACCAGATTGTGGTGAGCAAGCTCTTAGTCTGGTAGATACAATAAT
AAGGAGTGGTTCGGTTGATGTTGTTGTTGTGGACAGTGTAAGGAAGATTGGAACTGTTGG
TTCATGTTTCTTGGTTGCTGCCCTTGTCCCGAAAGGTGAGCTTGAAGGTGAAATGGGAGA
TGCTCATATGGCGATGCAAGCTAGACTGATGAGTCAAGCACTCCGCAAGCTCAGTCATTC
TCTATCGTTATCACAGACCATTTTAATCTTCATAAATCAGGCAAGAGTCAGGTCAAAACT
TTCAACTTTTGGGGGATTTGGAGGACCAAGTGAAGTTACTTGTGGTGGTAATGCCTTGAA
GTTCTATGCTTCTGTGCGTCTAAACATAAAACGAATTGGATTCGTCAAGAAGGGGGAAGA
GACCATAGGAAGCCAAGTTCTTGTCAAGATTGTGAAGAACAAGCATGCTCCTCCCTTTAG
AACTGCAGAATTCGAGCTTGAGTTTGGTAAAGGAATTTCTCGTGAAGCTGAACTTATTGA
CTTGGGAGTCAAACATAAGTTCATTACAAAAGGTGGTGGTGGTTATTACAATATCAACAA
TCAGAACTTTCGTGGTAGAGATGCTGTAAAACTTTTCCTATCGGAGAACACTAGTGCGAG
GGAGGATCTTATGATGAAACTTCGAGAAAAGCTTATTGACCAAGGGGACAACGAAAAGGG
ACCTGATGTAGACCCTGTTGAGGAGGTTGTATTGAATGATACCACTGATGAAGAAACCCC
AACTGCAGTCGAGGCATGAATCCTTTGATAAAAAGCTTATCTGACTTGCCTAATGGAACT
GCTGGATTTCCTGTCCATATCAGTATGTAACCAGCATCCTCGGATTATCATCATTTGTAA
GAAAACCTGCTCTTGCACCGTTGCACGTGTCCTACCCGTGGCTCTGTAAGTTGTCTCAAC
GTCAATTTTGATCGCGTGGTCTGTGGAATTATTGGATTAGATGAAGGTAAGGCCAATGCT
GTGACTTTGGTTCAATTTTTTTCTGGTAACCTGCTAAATTCTCTTGTATATAACAATTGT
AACTTCAGAGAGAATGTGTATCCAATCATTGATTTCAGAGAAAGCTTCGTTTTTGTCTGA
TTTA