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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g055530.3.1
CDS Infomation

Serine/threonine protein phosphatase 2A regulatory subunit B (AHRD V3.3 *** B9IFU5_POPTR)
Sequence

ATGTTTAAGATAATAAAAGGCAGAGGGAAGAAAAGCTCCAAAGGGGATGCTGTGGAGCCT
CCGATACCGAGTTCATTGCCTAATGTGCCTGTTGATCATGCTTCGCGAATAGCAACGTCT
GTTGTGGCGTCGCAGCATGTTACTTTGGCAAATGCCACACCAGATCCTAGTGTGGTTGAA
GTTTTGCCCTTATTGAAGGAGGTTGCGCTTTCTGAACGTCATGTTTTGTTTATCCGGAAG
CTCCAAATTTGCTGCGTGCAATTTGACTTTGCGGAGACGGTTAAGTGTGCTAGGCAAAAG
GAGATCAAGAGACAAACACTCACAGAGCTTATTGATTTAGTTCAATCAGGTTCATGTAAA
ATGAATGAAATAATGCAGGAAGAGTTGGTTAGGATGATATCTACCAACCTTTTCCGGTGC
CTGCCTCCTGCTTCACATGAGAACACTGGGTCGGAAGGTGTTGAGGAAGAGGATGACATG
TATCTGGATCCATCGTGGCCTCATTTGCAACTAGTGTATGAGTTACTTTTAAGGTATGTG
ATGTCGACTGAGATGGATACCAAGGTTGCTAAGCGATATCTTGACCACTCATTTGTGCTG
AAACTGCTCGACTTATTTGATTCAGAGGATCCTAGAGAGCGTGAGTATTTGAAGACTATC
CTTCACCGCATATATGGGAAATTCATGGTTCATAGGCCATTTATAAGGAACGGGATAAAC
AATGTATTCTACAGGTTTATATTTGAGACAGAGAGGCATAACGGTATGGGTGAATTGCTA
GAGATTCTTGGAAGTGTAATAAATGGATTTGCTCTACCAATGAAAGAAGAGCACAAGTTG
TTTCTTGTTCGGGCACTTATTCCACTCCATAAGCCTAAATGTGTTTCTGCATATCACCAT
CAGCTGTCCTACTGCATTACTCAGTTTGTTGAGAAAGATTACCGATTGGCAGATATCGTC
ATCACGGGGCTACTAAAATATTGGCCAATTACTAATTGTGGCAAGGAGGTTCTCTTCCTT
AATGAACTGGAAGAAGTTTTGGAAGGTACACAGCCTGCTGAATTTCAGCGCTGCTTGGTT
CCCCTTTTCAAGCAACTTGGACGAAGCATCAATAGTCCCCATTTTCAGGTTGCTGAGCGA
GCTCTGTTCTTATGGAACAATGAGCATATAGTAGACTTGATCGCACAGAATCGACGTGCA
ATTTTACCAATCATCTTTGAGCAATTAGAAAGGAATATGTGTGGTCACTGGAATCAGGCA
GTCCACGGGTTGACCTCTAATGTCAGGAGAATGTTCTTGGAGATGGATTCAGAACTTTTC
GAGGAGTGTGAAAAGGAATACAATGAAAAGGCAGCTGGTGCCAGCGGCCTTGTAGAGCAG
CGTGAGCGAGCTTGGAAAAAATTGGAAGAAGCTGCTTCAATGGTCCAGTAG

Peptide Sequence

PEP ID

Solyc05g055530.3.1
PEP Infomation

Serine/threonine protein phosphatase 2A regulatory subunit B (AHRD V3.3 *** B9IFU5_POPTR)
Sequence

MFKIIKGRGKKSSKGDAVEPPIPSSLPNVPVDHASRIATSVVASQHVTLANATPDPSVVE
VLPLLKEVALSERHVLFIRKLQICCVQFDFAETVKCARQKEIKRQTLTELIDLVQSGSCK
MNEIMQEELVRMISTNLFRCLPPASHENTGSEGVEEEDDMYLDPSWPHLQLVYELLLRYV
MSTEMDTKVAKRYLDHSFVLKLLDLFDSEDPREREYLKTILHRIYGKFMVHRPFIRNGIN
NVFYRFIFETERHNGMGELLEILGSVINGFALPMKEEHKLFLVRALIPLHKPKCVSAYHH
QLSYCITQFVEKDYRLADIVITGLLKYWPITNCGKEVLFLNELEEVLEGTQPAEFQRCLV
PLFKQLGRSINSPHFQVAERALFLWNNEHIVDLIAQNRRAILPIIFEQLERNMCGHWNQA
VHGLTSNVRRMFLEMDSELFEECEKEYNEKAAGASGLVEQRERAWKKLEEAASMVQ*

Transcript Sequence

Transcript ID

Solyc05g055530.3.1
Transcript Infomation

Serine/threonine protein phosphatase 2A regulatory subunit B (AHRD V3.3 *** B9IFU5_POPTR)
Sequence

ATGTTTAAGATAATAAAAGGCAGAGGGAAGAAAAGCTCCAAAGGGGATGCTGTGGAGCCT
CCGATACCGAGTTCATTGCCTAATGTGCCTGTTGATCATGCTTCGCGAATAGCAACGTCT
GTTGTGGCGTCGCAGCATGTTACTTTGGCAAATGCCACACCAGATCCTAGTGTGGTTGAA
GTTTTGCCCTTATTGAAGGAGGTTGCGCTTTCTGAACGTCATGTTTTGTTTATCCGGAAG
CTCCAAATTTGCTGCGTGCAATTTGACTTTGCGGAGACGGTTAAGTGTGCTAGGCAAAAG
GAGATCAAGAGACAAACACTCACAGAGCTTATTGATTTAGTTCAATCAGGTTCATGTAAA
ATGAATGAAATAATGCAGGAAGAGTTGGTTAGGATGATATCTACCAACCTTTTCCGGTGC
CTGCCTCCTGCTTCACATGAGAACACTGGGTCGGAAGGTGTTGAGGAAGAGGATGACATG
TATCTGGATCCATCGTGGCCTCATTTGCAACTAGTGTATGAGTTACTTTTAAGGTATGTG
ATGTCGACTGAGATGGATACCAAGGTTGCTAAGCGATATCTTGACCACTCATTTGTGCTG
AAACTGCTCGACTTATTTGATTCAGAGGATCCTAGAGAGCGTGAGTATTTGAAGACTATC
CTTCACCGCATATATGGGAAATTCATGGTTCATAGGCCATTTATAAGGAACGGGATAAAC
AATGTATTCTACAGGTTTATATTTGAGACAGAGAGGCATAACGGTATGGGTGAATTGCTA
GAGATTCTTGGAAGTGTAATAAATGGATTTGCTCTACCAATGAAAGAAGAGCACAAGTTG
TTTCTTGTTCGGGCACTTATTCCACTCCATAAGCCTAAATGTGTTTCTGCATATCACCAT
CAGCTGTCCTACTGCATTACTCAGTTTGTTGAGAAAGATTACCGATTGGCAGATATCGTC
ATCACGGGGCTACTAAAATATTGGCCAATTACTAATTGTGGCAAGGAGGTTCTCTTCCTT
AATGAACTGGAAGAAGTTTTGGAAGGTACACAGCCTGCTGAATTTCAGCGCTGCTTGGTT
CCCCTTTTCAAGCAACTTGGACGAAGCATCAATAGTCCCCATTTTCAGGTTGCTGAGCGA
GCTCTGTTCTTATGGAACAATGAGCATATAGTAGACTTGATCGCACAGAATCGACGTGCA
ATTTTACCAATCATCTTTGAGCAATTAGAAAGGAATATGTGTGGTCACTGGAATCAGGCA
GTCCACGGGTTGACCTCTAATGTCAGGAGAATGTTCTTGGAGATGGATTCAGAACTTTTC
GAGGAGTGTGAAAAGGAATACAATGAAAAGGCAGCTGGTGCCAGCGGCCTTGTAGAGCAG
CGTGAGCGAGCTTGGAAAAAATTGGAAGAAGCTGCTTCAATGGTCCAGTAGAATGTGTTG
CAACAGCTTAGTGAGTCCAGCTGAGTCCCGTGCAAGCAGTACCCCTCTGCGTAGAACATC
TCAAACTGCCTAATGATGGTTTTTGACTTTGCAAACTGAAGATGAATCGCTCCAAAGTTT
TTTCCATGCTTCCTGCTGCTTTTCCATAATTTGAGCGAGGCAGGCTGAAGGTATGGGCAT
TGTGTTATCTTTCCTTGACAGACATAGTGTGAAAGTTTTGTTTATTTTAGCTATTCTAAG
ACGATTATTCTTTAGCATTTTAGAACTAACAAATAATCAAATTTCTGGTCTTTGTGATCA
CCCCAACCCCATCCCCACACTCCCACTACCTCCTCTAGGAAAAGGAAAATGGGATACAGA
AGTATAGTGTTCCATTGTTTCTTTATTGCCCGTATTTTTGTCTGAAATGCTTTTCAATAG
CGATAATATGCTTGTTGATCGTTTTTATCTTCTGTTTCCTTGAAACAATTTATTTGTAGC
AACTTCTCGAAAGTTTCTTTATAGCAAACAATATCTTCAAGGTTTCTTCTT