Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g055480.3.1
CDS Infomation

NAC (AHRD V3.3 *** J7H8R1_CESNO)
Sequence

ATGGAACAAGAAGGATCGAAAGGGGCTGTAACGGTGGCACCAACGTCTTTAGCACCGGGA
TTCAGGTTTCATCCTACCGATGAGGAATTAGTTAGGTACTATCTACGCCGAAAGGTCTGT
GGAAAGCCATTCAGATTTCAAGCTGTTACTGAAATTGATGTGTACAAATCTGAACCTTGT
GACCTTGCAGGATATTCATCGGTGAAGAGCAGAGATATGGAGTGGTACTTCTTCAGCCCT
GTGGATAAGAAGTATTGTAATGGATCTCGGCTTAACCGAGCTACTGGTCAAGGATATTGG
AAAGCTACTGGGAAAGATCGTCATATCAGCCATAAGTCTCAGGCCATTGGGATGAAGAAG
ACTCTCGTTTTCCATAGTGGTCGAGCTCCCGATGGCAAGAGAACTAATTGGGTAATGCAT
GAGTACAGGCTTGCGGACAAAGAGTTGGAGAAGGCTGGAATCGTGCAGGATTCCTTTGTT
CTATGTAGAATCTTCCAAAAAAGCGGTTTGGGACCACCAACTGGTGACAGATATGCACCA
TTTATCGAGGAGGAATGGGATGACGATTCAGCCGTGCTTCCTGGAGGAGAGACAGAGGAT
GACGCAGTGAATGGTGTTGATGCACGAGTTGAGAGCAACGATCTTGACCAGGATGCTCCG
CCCAAGATTGCTTGCGATAATGAGAACGTGATTGAACTTCGAAGTCTTCCATTTGCTTGC
AAGAGGGAGAGATCAGAAGAACCTGAACTTCTCTCTTTAAGCCAAAACAAGAAACCGAAG
CATGATGTTCCAAGCTCTAGCCGTGCAAATGGTTCTGAAGACTCAACTATTACTAGTAAA
GATCCGGAGAATATGATGACGACAAAAGATTACCCTCTAGCTCTCTTAGGATTCCCGTTG
TTAGAGTCCTTCGAGCCCAAGGATCCCCAACCTTCTAATCCCCTCACATTTGATTCCTCC
AATCTTGAAAAATCCGTCCCTCCAGGCTACCTGAAGTTCATCAGCAATCTAGAGACGGAG
ATCCTAAATGTCTCCATGGAGAGGGAGACGCTAAAGATTGAAGTAATGAGAGCTCAAGCC
ATGATCAACGTTCTTCAATCGCGGATTGATCTCTTGACCAAAGAGAACGAAGACATGAGA
AAACTTGTCCGAGGTGGTTAG

Peptide Sequence

PEP ID

Solyc05g055480.3.1
PEP Infomation

NAC (AHRD V3.3 *** J7H8R1_CESNO)
Sequence

MEQEGSKGAVTVAPTSLAPGFRFHPTDEELVRYYLRRKVCGKPFRFQAVTEIDVYKSEPC
DLAGYSSVKSRDMEWYFFSPVDKKYCNGSRLNRATGQGYWKATGKDRHISHKSQAIGMKK
TLVFHSGRAPDGKRTNWVMHEYRLADKELEKAGIVQDSFVLCRIFQKSGLGPPTGDRYAP
FIEEEWDDDSAVLPGGETEDDAVNGVDARVESNDLDQDAPPKIACDNENVIELRSLPFAC
KRERSEEPELLSLSQNKKPKHDVPSSSRANGSEDSTITSKDPENMMTTKDYPLALLGFPL
LESFEPKDPQPSNPLTFDSSNLEKSVPPGYLKFISNLETEILNVSMERETLKIEVMRAQA
MINVLQSRIDLLTKENEDMRKLVRGG*

Transcript Sequence

Transcript ID

Solyc05g055480.3.1
Transcript Infomation

NAC (AHRD V3.3 *** J7H8R1_CESNO)
Sequence

AAAATAAGGCATGTTATTATAATCCACAAAATCACTTTGTCCCTCTATAAATGGCTAATC
TTTCTTGGATTTTCGATTTCCGTGTCAAGCAAGCCTTCGCCATTTTCACTTTACTTCACT
TGTAATCTTCACAATTCTCATATCTATGATACCCTTTATCTTTATGTTCCATGTATTTTT
CTTAATTGGGTATTCTCAAAAAAGTTAAATTTACATTCTTGGCTTTTTGGGTGGTTGAGA
AATGGAACAAGAAGGATCGAAAGGGGCTGTAACGGTGGCACCAACGTCTTTAGCACCGGG
ATTCAGGTTTCATCCTACCGATGAGGAATTAGTTAGGTACTATCTACGCCGAAAGGTCTG
TGGAAAGCCATTCAGATTTCAAGCTGTTACTGAAATTGATGTGTACAAATCTGAACCTTG
TGACCTTGCAGGATATTCATCGGTGAAGAGCAGAGATATGGAGTGGTACTTCTTCAGCCC
TGTGGATAAGAAGTATTGTAATGGATCTCGGCTTAACCGAGCTACTGGTCAAGGATATTG
GAAAGCTACTGGGAAAGATCGTCATATCAGCCATAAGTCTCAGGCCATTGGGATGAAGAA
GACTCTCGTTTTCCATAGTGGTCGAGCTCCCGATGGCAAGAGAACTAATTGGGTAATGCA
TGAGTACAGGCTTGCGGACAAAGAGTTGGAGAAGGCTGGAATCGTGCAGGATTCCTTTGT
TCTATGTAGAATCTTCCAAAAAAGCGGTTTGGGACCACCAACTGGTGACAGATATGCACC
ATTTATCGAGGAGGAATGGGATGACGATTCAGCCGTGCTTCCTGGAGGAGAGACAGAGGA
TGACGCAGTGAATGGTGTTGATGCACGAGTTGAGAGCAACGATCTTGACCAGGATGCTCC
GCCCAAGATTGCTTGCGATAATGAGAACGTGATTGAACTTCGAAGTCTTCCATTTGCTTG
CAAGAGGGAGAGATCAGAAGAACCTGAACTTCTCTCTTTAAGCCAAAACAAGAAACCGAA
GCATGATGTTCCAAGCTCTAGCCGTGCAAATGGTTCTGAAGACTCAACTATTACTAGTAA
AGATCCGGAGAATATGATGACGACAAAAGATTACCCTCTAGCTCTCTTAGGATTCCCGTT
GTTAGAGTCCTTCGAGCCCAAGGATCCCCAACCTTCTAATCCCCTCACATTTGATTCCTC
CAATCTTGAAAAATCCGTCCCTCCAGGCTACCTGAAGTTCATCAGCAATCTAGAGACGGA
GATCCTAAATGTCTCCATGGAGAGGGAGACGCTAAAGATTGAAGTAATGAGAGCTCAAGC
CATGATCAACGTTCTTCAATCGCGGATTGATCTCTTGACCAAAGAGAACGAAGACATGAG
AAAACTTGTCCGAGGTGGTTAGACAATAACAGCATTTCGATTCGGTTTAGGTTTGTACTA
CCTTCAGGAAGAGCAAGATATAGTAAAAAGATGTTTGAAGACATTTCTGTAGTTCTTGTT
GTAACCTGGATCATATGTACCTTTTTAGGTATCTGCAGAATTTTTTTCTATTGCATTAGT
TTAAACTTTGAAGTCTTAGACTGTTATCTTAATGATATTGTTGTTTAATAACAATAGTCG
GGTCATGTTGTTCGAATTTTTCGAAAATATAAAATAGCGCAAGTGCATTATCTGAAGTTG
CAACGTCAGTGTTGCATTACTTTTGAAAAGTTCAAGCAA