Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g055470.3.1
CDS Infomation

NAC domain protein, (AHRD V3.3 *** A0A061FNG1_THECC)
Sequence

ATGGAACAAGAAGGATCGAAAGGGGCTGTAACGGTGGCACCAACGTCTTTAGCACCGGGA
TTCAGGTTTCATCCTACCGATGAGGAATTAGTTAGGTACTATCTACGCCGAAAGGTCTGT
GGAAAGCCATTCAGATTTCAAGCTGTTACTGAAATTGATGTGTACAAATCTGAACCTTGT
GACCTTGCAGGATATTCATCGGTGAAGAGCAGAGATATGGAGTGGTACTTCTTCAGCCCT
GTGGATAAGAAGTATTGTAATGGATCTCGGCTTAACCGAGCTACTGGTCAAGGATATTGG
AAAGCTACTGGGAAAGATCGTCATATCAGCCATAAGTCTCAGGCCATTGGGATGAAGAAG
ACTCTCGTTTTCCATAGTGGTCGAGCTCCCGATGGCAAGAGAACTAATTGGGTAATGCAT
GAGTACAGGCTTGCGGACAAAGAGTTGGAGAAGGCTGGAATCGTGCAGGATTCCTTTGTT
CTATGTAGAATCTTCCAAAAAAGCGGTTTGGGACCACCAACTGGTGACAGATATGCACCA
TTTATCGAGGAGGAATGGGATGACGATTCAGCCGTGCTTCCTGGAGGAGAGACAGAGGAT
GACGCAGTGAATGGTGTTGATGCACGAGTTGAGAGCAACGATCTTGACCAGGGTCGGCGA
AATGGATGGCGCCGGGGTTCAGATTTCATCCGACGGATGAGGAGTTGGTCAGGTACTATC
TCCGGCGGAAGATTTGATGCTATTTCTGAGATCGATATTTATAAAGTTGAACCATGGGAT
CTTCCGGGTATGTCGAGGTTGAAAACAAGAGATTTGGAATGGTACTTCTTCAGTGTGCTT
GATAGGAAGCATGGTAATGGAGCAAAAACCAATCGGGCGACAGAACGAGGCTACTGGAAG
ACAACTGGAAAGGACAGAGCTGTCCATCATAAGTCTAAGGTTGTCGGTATGAAGAAGACT
CTAGTTTTTCATAGTGGTCGGGCCCCAAAAGGTGAGAGGACTAATTGGGTCATGCATGAG
TACAAACTAATTGATGAGGAGTTGCAAAAAGCTGGAATTGTTCAGGATGCACTTGTGTTA
TGTAGAGTCTTCCAGAAGAGTGGCGCAGGGCCAAAGAATGGTGAAAAGTATGGGGCTCCT
TTTGTTGAGGAGGAATGGGAGGATGATGAGTTAGAAATTGTTCCCAAGGAGGAGGCTGCT
GAAGAAGTTGAATTTGGAGATGATATCTATCTAGATGGACATGACCTTGAGGAGATTCTT
GGGGCTGACTCACCTGTGGATGGTGCTCCACATCCGTTGAACTGCTATAGTGAGGGAAAT
GCTAGCAACAGTGGGGAAACAAGTAACTCCTTTGAAGAAGCACAAAACTGGCTTCAGCAA
CCGGATGAGCAGGAATCATTTGATCCTGCAATTCAACAGATCAATGCAGATACAAATCCT
GTCAAGCATGAATTCATGAGTGAACCAAGCAATAGTATGAGCACTGAAGATGTGGATTAC
TTGCTTGATGAACCAGTTATAACTGCAACTGATAACCTTCAATTCAGTGATGGAGCATTC
CTTGAAGCTAGTGATCTTTCAAGACCCATTGAGGTTGATACGTCAGGTTTTGACATGCTT
GAGGATTACCTTGCATTCTTTGATGCAGACGATAACTTCCAAAGTATGGGTTTCAATCCA
CCAATGATGACCGGAGATGATGATCATGTGTCTGACTTAGCATCTGTGGAGGAGAAGAAT
ATTGCCGAGGTAAATGACCAACCTATTGCACCAAGTGAAGAGCCTGATGATCAAAAGAAG
AATGTTGCATCATCCTCGAAACTGGAACCATCTAAATTTGGATCAGATTACAAGTATCCA
TTTATGAAGCAGACAAGCTGTATGTTGGGCGGTATTCCTGCTCCTCCTGCATTTGCTTCG
GAGTTCCCTTCAAAAAATGCAGCTCTCCGTATGAATTCTTCCTCAGAAGCATCCAGTTCA
ATCCACGTCACTGGATTTATTCGAATAACAAACATGACTGTGAGCAGCAATGGGATGGAC
GGGTTGGTGGGCAAGCATGGGAATTACAACGTTATCCTATCTTTAGGCTTATCACAGCAT
GGTGATAGCTCCGCTCACTTGGAATCAGAAGCTAGTTTTCTCCCTGGGAAGACAATTTCG
ACAGTGTCCTGGTGCTGGTTCTATTATCTGTTCCTTTGGGTCCTCCTTCTTTCCACAACC
TTCAAAATCGGGACCTTCATTCGTGCTGCGTAA

Peptide Sequence

PEP ID

Solyc05g055470.3.1
PEP Infomation

NAC domain protein, (AHRD V3.3 *** A0A061FNG1_THECC)
Sequence

MEQEGSKGAVTVAPTSLAPGFRFHPTDEELVRYYLRRKVCGKPFRFQAVTEIDVYKSEPC
DLAGYSSVKSRDMEWYFFSPVDKKYCNGSRLNRATGQGYWKATGKDRHISHKSQAIGMKK
TLVFHSGRAPDGKRTNWVMHEYRLADKELEKAGIVQDSFVLCRIFQKSGLGPPTGDRYAP
FIEEEWDDDSAVLPGGETEDDAVNGVDARVESNDLDQGRRNGWRRGSDFIRRMRSWSGTI
SGGRFDAISEIDIYKVEPWDLPGMSRLKTRDLEWYFFSVLDRKHGNGAKTNRATERGYWK
TTGKDRAVHHKSKVVGMKKTLVFHSGRAPKGERTNWVMHEYKLIDEELQKAGIVQDALVL
CRVFQKSGAGPKNGEKYGAPFVEEEWEDDELEIVPKEEAAEEVEFGDDIYLDGHDLEEIL
GADSPVDGAPHPLNCYSEGNASNSGETSNSFEEAQNWLQQPDEQESFDPAIQQINADTNP
VKHEFMSEPSNSMSTEDVDYLLDEPVITATDNLQFSDGAFLEASDLSRPIEVDTSGFDML
EDYLAFFDADDNFQSMGFNPPMMTGDDDHVSDLASVEEKNIAEVNDQPIAPSEEPDDQKK
NVASSSKLEPSKFGSDYKYPFMKQTSCMLGGIPAPPAFASEFPSKNAALRMNSSSEASSS
IHVTGFIRITNMTVSSNGMDGLVGKHGNYNVILSLGLSQHGDSSAHLESEASFLPGKTIS
TVSWCWFYYLFLWVLLLSTTFKIGTFIRAA*

Transcript Sequence

Transcript ID

Solyc05g055470.3.1
Transcript Infomation

NAC domain protein, (AHRD V3.3 *** A0A061FNG1_THECC)
Sequence

AAAATAAGGCATGTTATTATAATCCACAAAATCACTTTGTCCCTCTATAAATGGCTAATC
TTTCTTGGATTTTCGATTTCCGTGTCAAGCAAGCCTTCGCCATTTTCACTTTACTTCACT
TGTAATCTTCACAATTCTCATATCTATGATACCCTTTATCTTTATGTTCCATGTATTTTT
CTTAATTGGGTATTCTCAAAAAAGTTAAATTTACATTCTTGGCTTTTTGGGTGGTTGAGA
AATGGAACAAGAAGGATCGAAAGGGGCTGTAACGGTGGCACCAACGTCTTTAGCACCGGG
ATTCAGGTTTCATCCTACCGATGAGGAATTAGTTAGGTACTATCTACGCCGAAAGGTCTG
TGGAAAGCCATTCAGATTTCAAGCTGTTACTGAAATTGATGTGTACAAATCTGAACCTTG
TGACCTTGCAGGATATTCATCGGTGAAGAGCAGAGATATGGAGTGGTACTTCTTCAGCCC
TGTGGATAAGAAGTATTGTAATGGATCTCGGCTTAACCGAGCTACTGGTCAAGGATATTG
GAAAGCTACTGGGAAAGATCGTCATATCAGCCATAAGTCTCAGGCCATTGGGATGAAGAA
GACTCTCGTTTTCCATAGTGGTCGAGCTCCCGATGGCAAGAGAACTAATTGGGTAATGCA
TGAGTACAGGCTTGCGGACAAAGAGTTGGAGAAGGCTGGAATCGTGCAGGATTCCTTTGT
TCTATGTAGAATCTTCCAAAAAAGCGGTTTGGGACCACCAACTGGTGACAGATATGCACC
ATTTATCGAGGAGGAATGGGATGACGATTCAGCCGTGCTTCCTGGAGGAGAGACAGAGGA
TGACGCAGTGAATGGTGTTGATGCACGAGTTGAGAGCAACGATCTTGACCAGGGTCGGCG
AAATGGATGGCGCCGGGGTTCAGATTTCATCCGACGGATGAGGAGTTGGTCAGGTACTAT
CTCCGGCGGAAGATTTGATGCTATTTCTGAGATCGATATTTATAAAGTTGAACCATGGGA
TCTTCCGGGTATGTCGAGGTTGAAAACAAGAGATTTGGAATGGTACTTCTTCAGTGTGCT
TGATAGGAAGCATGGTAATGGAGCAAAAACCAATCGGGCGACAGAACGAGGCTACTGGAA
GACAACTGGAAAGGACAGAGCTGTCCATCATAAGTCTAAGGTTGTCGGTATGAAGAAGAC
TCTAGTTTTTCATAGTGGTCGGGCCCCAAAAGGTGAGAGGACTAATTGGGTCATGCATGA
GTACAAACTAATTGATGAGGAGTTGCAAAAAGCTGGAATTGTTCAGGATGCACTTGTGTT
ATGTAGAGTCTTCCAGAAGAGTGGCGCAGGGCCAAAGAATGGTGAAAAGTATGGGGCTCC
TTTTGTTGAGGAGGAATGGGAGGATGATGAGTTAGAAATTGTTCCCAAGGAGGAGGCTGC
TGAAGAAGTTGAATTTGGAGATGATATCTATCTAGATGGACATGACCTTGAGGAGATTCT
TGGGGCTGACTCACCTGTGGATGGTGCTCCACATCCGTTGAACTGCTATAGTGAGGGAAA
TGCTAGCAACAGTGGGGAAACAAGTAACTCCTTTGAAGAAGCACAAAACTGGCTTCAGCA
ACCGGATGAGCAGGAATCATTTGATCCTGCAATTCAACAGATCAATGCAGATACAAATCC
TGTCAAGCATGAATTCATGAGTGAACCAAGCAATAGTATGAGCACTGAAGATGTGGATTA
CTTGCTTGATGAACCAGTTATAACTGCAACTGATAACCTTCAATTCAGTGATGGAGCATT
CCTTGAAGCTAGTGATCTTTCAAGACCCATTGAGGTTGATACGTCAGGTTTTGACATGCT
TGAGGATTACCTTGCATTCTTTGATGCAGACGATAACTTCCAAAGTATGGGTTTCAATCC
ACCAATGATGACCGGAGATGATGATCATGTGTCTGACTTAGCATCTGTGGAGGAGAAGAA
TATTGCCGAGGTAAATGACCAACCTATTGCACCAAGTGAAGAGCCTGATGATCAAAAGAA
GAATGTTGCATCATCCTCGAAACTGGAACCATCTAAATTTGGATCAGATTACAAGTATCC
ATTTATGAAGCAGACAAGCTGTATGTTGGGCGGTATTCCTGCTCCTCCTGCATTTGCTTC
GGAGTTCCCTTCAAAAAATGCAGCTCTCCGTATGAATTCTTCCTCAGAAGCATCCAGTTC
AATCCACGTCACTGGATTTATTCGAATAACAAACATGACTGTGAGCAGCAATGGGATGGA
CGGGTTGGTGGGCAAGCATGGGAATTACAACGTTATCCTATCTTTAGGCTTATCACAGCA
TGGTGATAGCTCCGCTCACTTGGAATCAGAAGCTAGTTTTCTCCCTGGGAAGACAATTTC
GACAGTGTCCTGGTGCTGGTTCTATTATCTGTTCCTTTGGGTCCTCCTTCTTTCCACAAC
CTTCAAAATCGGGACCTTCATTCGTGCTGCGTAAGGCCTCAAGAATCTAGAGAGCTCAAT
TTTTACTTTTGAAAGTCATGGCAGGATATCTTGATCTCTGACTGAAGTGAACATTATTAT
ATATGATACACAACCTATACCAGGAATATTTAGTGTCTTAGACATTCAAGTGAGTTGATG
CAGTTTCTGACTCCTGAACAAATTTTAAAATTCAATGATGTATCACAGTGCAGCTTGGAT
GCTGCAAAACTCATTTTACACAACAATTAATTACTGTGATGATTTTATGTAATGCCATTC
TCTTTTTGGCTGATCTGTCT