Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g055350.3.1
CDS Infomation

Nuclear ribonuclease Z (AHRD V3.3 *** G7K7F6_MEDTR)
Sequence

ATGCAAATCTCACTAGCCACTACAATACCAAAAGTACCTTCATTCTCCACATTTTACCCT
TCCACCTTAAACCAAACTCAATATAATGTTCAAAAACCAAGCCATGGTATCTCAAAGCAA
ACACACATCAGTCTTCCAGCTCCATGTGCTTTCAAAAGCTCCTCTACCGGCTTCTTGTCT
GCCATTGAGAGAGCTATAGAGGAAGAAGAGTATAGAAAAGCCAGGGCTGAGGTAATCCGC
AAAGGGTTAAATGTTGAAGGCTATTCAATTGAAGGACACTCGATTGGTGGGCATGAGACC
TGTGTTATTGTGCCACAACTAAAGGCTGCTTTTGATATTGGGAGATGTCCTTCAAGGGCC
GTTCATCAAAACTTCTTGTTTATCACTCACGCGCATCTTGACCACATTGGTGGACTTCCT
ATGTATATTGCTACTCGCGGTTTGTACGGCTTGAAGCCCCCGACTGTCTTTGTGCCTCCT
TCCATAAAAGAGGATGTAGAAAAGTTGCTAGATGTTCATAGATCTATGAGTCAGGTGGAA
CTGAATTTGGATCTGATTGCTTTAGATGTAGGGGAAACATATGAGATGCGGAATGACCTG
GTAGTAAGGCCAGTTAGAACTCACCATGTTATTCCTAGCCAGGGCTATGTGATATACTCA
GTTAGAAAGAAGCTGAAGAAGCAATACATTCATCTAGAGGGGAAAAAAATTGAGAAACTG
AAGAAATCGGGTGTTCAGATTACAGATAGTGTGTTGTGTCCAGAAGTAGCCTTCACGGGA
GATACAGCATCGGATTTTTATCTTGATCCTCGCAGTGCTGATGCCTTGCGGGCAAAAGTT
CTTATAACTGAGGCAACTTTCTTGGATGACAACTGCAGTGTTGAGCATGCACGAGAGCAC
GGTCATACCCATCTATACGAGATAATGGAGCAAGCAAAATGGATACGGAACAAAACACTC
GTTTTAACCCATTTTTCACCACGCTACAGTGTTGAGGAAATCCGACAAGGTATATCAAAG
TTGCAACCCCAGATATCAGCCAAAGTGGTTGCCTTAACTGAGGGCTTCAAATCAATGCAT
TTGTAG

Peptide Sequence

PEP ID

Solyc05g055350.3.1
PEP Infomation

Nuclear ribonuclease Z (AHRD V3.3 *** G7K7F6_MEDTR)
Sequence

MQISLATTIPKVPSFSTFYPSTLNQTQYNVQKPSHGISKQTHISLPAPCAFKSSSTGFLS
AIERAIEEEEYRKARAEVIRKGLNVEGYSIEGHSIGGHETCVIVPQLKAAFDIGRCPSRA
VHQNFLFITHAHLDHIGGLPMYIATRGLYGLKPPTVFVPPSIKEDVEKLLDVHRSMSQVE
LNLDLIALDVGETYEMRNDLVVRPVRTHHVIPSQGYVIYSVRKKLKKQYIHLEGKKIEKL
KKSGVQITDSVLCPEVAFTGDTASDFYLDPRSADALRAKVLITEATFLDDNCSVEHAREH
GHTHLYEIMEQAKWIRNKTLVLTHFSPRYSVEEIRQGISKLQPQISAKVVALTEGFKSMH
L*

Transcript Sequence

Transcript ID

Solyc05g055350.3.1
Transcript Infomation

Nuclear ribonuclease Z (AHRD V3.3 *** G7K7F6_MEDTR)
Sequence

GAAAACCTTATCCCTCTCTCTATTTCTCTCTACCATTTTTACAAAATATCACTGGAAAAG
TACATGCTCTTTCCGGCGCCGATAGTAAATTAAACCGGAAAATTTTGACGGCGGCCGGTG
CTCTGGTTGTAACTGAGTTTCTCTTCATACAAAGTTAGCTTCTTTGGTTCTTTTCATTCT
TCATTTCAGGGGTTGTAATCCAAATATTGAAGCACAAAAACCATTTCGACCCCTTCTCTC
CTGCTCAGAGTACATCTATCTGTATGTGTTCTTCAATTCAAAAATGCAAATCTCACTAGC
CACTACAATACCAAAAGTACCTTCATTCTCCACATTTTACCCTTCCACCTTAAACCAAAC
TCAATATAATGTTCAAAAACCAAGCCATGGTATCTCAAAGCAAACACACATCAGTCTTCC
AGCTCCATGTGCTTTCAAAAGCTCCTCTACCGGCTTCTTGTCTGCCATTGAGAGAGCTAT
AGAGGAAGAAGAGTATAGAAAAGCCAGGGCTGAGGTAATCCGCAAAGGGTTAAATGTTGA
AGGCTATTCAATTGAAGGACACTCGATTGGTGGGCATGAGACCTGTGTTATTGTGCCACA
ACTAAAGGCTGCTTTTGATATTGGGAGATGTCCTTCAAGGGCCGTTCATCAAAACTTCTT
GTTTATCACTCACGCGCATCTTGACCACATTGGTGGACTTCCTATGTATATTGCTACTCG
CGGTTTGTACGGCTTGAAGCCCCCGACTGTCTTTGTGCCTCCTTCCATAAAAGAGGATGT
AGAAAAGTTGCTAGATGTTCATAGATCTATGAGTCAGGTGGAACTGAATTTGGATCTGAT
TGCTTTAGATGTAGGGGAAACATATGAGATGCGGAATGACCTGGTAGTAAGGCCAGTTAG
AACTCACCATGTTATTCCTAGCCAGGGCTATGTGATATACTCAGTTAGAAAGAAGCTGAA
GAAGCAATACATTCATCTAGAGGGGAAAAAAATTGAGAAACTGAAGAAATCGGGTGTTCA
GATTACAGATAGTGTGTTGTGTCCAGAAGTAGCCTTCACGGGAGATACAGCATCGGATTT
TTATCTTGATCCTCGCAGTGCTGATGCCTTGCGGGCAAAAGTTCTTATAACTGAGGCAAC
TTTCTTGGATGACAACTGCAGTGTTGAGCATGCACGAGAGCACGGTCATACCCATCTATA
CGAGATAATGGAGCAAGCAAAATGGATACGGAACAAAACACTCGTTTTAACCCATTTTTC
ACCACGCTACAGTGTTGAGGAAATCCGACAAGGTATATCAAAGTTGCAACCCCAGATATC
AGCCAAAGTGGTTGCCTTAACTGAGGGCTTCAAATCAATGCATTTGTAGCTATTTTTTCT
AGTTAGAGCCTCTTGGTCTGTCATTATACCTCGAGATGATTAGAATAGATTCGTAGATCA
AATCGACTATTTTGTTTTAAATTCAAAATATTTTCATAGAGTTTATTCATATCAACGTTT
TGTATAGAAGTTATGATCTCAGCAATAATGTCT