Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc05g055110.3.1
CDS Infomation	Nuclear pore complex protein Nup136d (AHRD V3.3 *** W6JJ82_NICBE)
Sequence	ATGGCGGCGGCGGGAGACGGCAGACCGGCGAGTTCCTCGGCCTACGAAGGCGGAGGAGCT GGAGGAAAGTTCCGGAGACGACCTTTCCGTAAGAACCAAACTACTCCTTACGATCGACCA CCGAATGACCTCCGGAACCCTAGTTGGCTCACAAAGCTCGTTGTCGATCCTGCCACGAAG CTCATCACTTCCGGTGCTCGACGGTTCTTTTCTTCGATCTTCCAAAAACGTCTTACCCCT GCTCCGACACCATTACCACTACCTCCGATGCCATTGCCACCTCCTCCAGAAGCAAGACAA GAATCAAAGGATGTGCAGCAGGAGTCTTGTCTTAATGATCATGCTGGACCAGTAGTAGCC ACTGGACATGAAGTTTGCAAAGTTGCATGCAGTTCTGAGGATGGTGCATTCTCAGAGTTT GAGCAACTGTTGAAACAAAAGACATTCAGCAGAGATGAAATTGACCGCTTGACAGAACTT TTGCGTTCCAAAGCTGTAGATACCCCTGCTGGGAATGATAAGGGTGCTGTTGCTACTCCT GTCACAAGTTCAAGAGTCCCTAAAGGGAATGTTGCATCTGCTGCTGAACTTGCAAAAGCT TACATGGACACTAGGCCATCAAAGGTGTCACCGACAATTCTTAGTTCGCAAAGTCAAGTT GTGAGAGTAGATACACCGGTGCTAAAAAGTGTTGCATATTCCCAAAATTTGCCTATTGCA CCAGTGACTACAAAGACTGCTGGTCTTGTTGGGGTCCGAGCAAATGGATTTACCCCTCCA AGGTCTCGTGGAAGATCTGCAATATATCACATGGCTCGCACACCATACTCCAGACTTCGT CTAACTGATGGTCAAATGGCAAGTAGCTCCACACATAATGCTTATAGCGGGCCTTCTTTA TCTGAGTCAGTCTTGGAGCATGATGGATATTTTGGCTCTAAACAGCCCCTCAAACGGAGA AGTTCTGCTCTGGAAGATGATATCGGCTCTGTTGGCCCCATTCGTAGGACTCGACAGAAA CCAAATCTCCTATCACATGGAATTTCACGTCCTAATCTTGGAGGAGTTGCTTCTGCTGCT GCTGATGTTCCTACAAGGTATGCTCACATCTCTTCCGATCCCAGTGAGACAGCTGCAAAG ATATTGGAGCATCTTGAAAATCTGACTCCAAAGGAGAAGTCATCAGAATCAAGACTAACT GCAGGGAGTGATAAGACACCCAAGAAATTGTCACCAAACATGCTTCGCGGGCAAGCTCTT AAAAGCTTGGAGTCTTTGGATTCTCCCAAGCTGCTACAGAGTGCTCAAGACAGCCATAAG TTGGAAAATTGGTCTGAGGTTATTCCAACCAATGATCATGATTCTAGTTTGCAGAAGCAA GGCGTAATTGAACAACATCGGCAAAATAAATCTATTAACAGGCCAACTGTTGTACCAAAG AAAAATGAAAAAAATTCATTTGAAGATGCTCAACCAGGTGTGGAAACTGCTGATTCACTG GATAAGAAGTCTTCAGTTCAACCTCAGAAGAAGCATGCTTTTAGGATGAGTGCACTTGAG GACTCATTCGAGATGGATGAGGATATAAACTTTGACAATCCTGCCTCTCAATTGGCTGAA GGAAGAGATAAGATGGGTATATCTGGTGCTGAAAAGAAGTCTCTGTCTACCGATGAAGCC CTGAACAAAAAACCTGCTGCTCTTTCTGAAACAAATGCTACCTTGGGGATTTTGAACAAA AGAAATGATATGAAGGCTCCTGATGCTGCTCTTATCAGCATCAGCAGCCCCAGTTTCCTG TCCAGTTCTGATTCCCAGTCACCCGAGGTTGTTGCACCATCATTTGGGTTAAACAAATCA AAGGAGTCGAGTGGTGACAAGGTTCCAGCTCTTCTATTTTCATCATCATTTCCTCTCTCA GGGTTAAAACCAGAAAGCTCGAGCAGCTTATCAAACCCTGCTTTTGGCCTGGCTGGTGCT TCATTGGAACTCTTTGAGTCAGATAACTCACAGAAGGATGGGAAAAGCAATGAGAAATCA GAACCTTTATCATCTGGTTTATCACCTTCACCTTTATTTGCTGCTCCATCAAGCACTTCT ACCTTCAGTAATGGACAGTTCGCACCTAGTCCTGCTATCTCAGCCTTTTCTCTCTTGGAT TCAAGTAATTCCCCAAAGGATGTTCAGTCTTACAGTTCAAGTGAGGTTGCCCATTCCACA AGCATTTCAGCTGCTGTTGGTGGTGGTCTGTTTGGTTTTGCTGCAGCATCTTCAGTATCA ACTGAACCTCTTATCAAATCTGGGCCCTCTGAAGTTCCATCAATGGTGTCAAAGCTTTTA ACAGCTTCCACTGCAGACAACGCAGACTTGCAAACCAAAGCAGCTAATTCTGACAATTTG AGTAGCAGTTCACCTTTTTTCATCAGGAATGTCTACAGTTACTACAGCTAG

Peptide Sequence

PEP ID	Solyc05g055110.3.1
PEP Infomation	Nuclear pore complex protein Nup136d (AHRD V3.3 *** W6JJ82_NICBE)
Sequence	MAAAGDGRPASSSAYEGGGAGGKFRRRPFRKNQTTPYDRPPNDLRNPSWLTKLVVDPATK LITSGARRFFSSIFQKRLTPAPTPLPLPPMPLPPPPEARQESKDVQQESCLNDHAGPVVA TGHEVCKVACSSEDGAFSEFEQLLKQKTFSRDEIDRLTELLRSKAVDTPAGNDKGAVATP VTSSRVPKGNVASAAELAKAYMDTRPSKVSPTILSSQSQVVRVDTPVLKSVAYSQNLPIA PVTTKTAGLVGVRANGFTPPRSRGRSAIYHMARTPYSRLRLTDGQMASSSTHNAYSGPSL SESVLEHDGYFGSKQPLKRRSSALEDDIGSVGPIRRTRQKPNLLSHGISRPNLGGVASAA ADVPTRYAHISSDPSETAAKILEHLENLTPKEKSSESRLTAGSDKTPKKLSPNMLRGQAL KSLESLDSPKLLQSAQDSHKLENWSEVIPTNDHDSSLQKQGVIEQHRQNKSINRPTVVPK KNEKNSFEDAQPGVETADSLDKKSSVQPQKKHAFRMSALEDSFEMDEDINFDNPASQLAE GRDKMGISGAEKKSLSTDEALNKKPAALSETNATLGILNKRNDMKAPDAALISISSPSFL SSSDSQSPEVVAPSFGLNKSKESSGDKVPALLFSSSFPLSGLKPESSSSLSNPAFGLAGA SLELFESDNSQKDGKSNEKSEPLSSGLSPSPLFAAPSSTSTFSNGQFAPSPAISAFSLLD SSNSPKDVQSYSSSEVAHSTSISAAVGGGLFGFAAASSVSTEPLIKSGPSEVPSMVSKLL TASTADNADLQTKAANSDNLSSSSPFFIRNVYSYYS*

Transcript Sequence

Transcript ID	Solyc05g055110.3.1
Transcript Infomation	Nuclear pore complex protein Nup136d (AHRD V3.3 *** W6JJ82_NICBE)
Sequence	CACGCCCGCCAATGTCAATTTGCAAATATTTTTCTCGATTTCCGTGTCCATCCATAAAAA TAAAACCCTAATTTCCCCCTCATTTTCCCCTTTTTCCCTCGTCTTTTACTCTCGGTGGTT TTGAATAAATGGCGGCGGCGGGAGACGGCAGACCGGCGAGTTCCTCGGCCTACGAAGGCG GAGGAGCTGGAGGAAAGTTCCGGAGACGACCTTTCCGTAAGAACCAAACTACTCCTTACG ATCGACCACCGAATGACCTCCGGAACCCTAGTTGGCTCACAAAGCTCGTTGTCGATCCTG CCACGAAGCTCATCACTTCCGGTGCTCGACGGTTCTTTTCTTCGATCTTCCAAAAACGTC TTACCCCTGCTCCGACACCATTACCACTACCTCCGATGCCATTGCCACCTCCTCCAGAAG CAAGACAAGAATCAAAGGATGTGCAGCAGGAGTCTTGTCTTAATGATCATGCTGGACCAG TAGTAGCCACTGGACATGAAGTTTGCAAAGTTGCATGCAGTTCTGAGGATGGTGCATTCT CAGAGTTTGAGCAACTGTTGAAACAAAAGACATTCAGCAGAGATGAAATTGACCGCTTGA CAGAACTTTTGCGTTCCAAAGCTGTAGATACCCCTGCTGGGAATGATAAGGGTGCTGTTG CTACTCCTGTCACAAGTTCAAGAGTCCCTAAAGGGAATGTTGCATCTGCTGCTGAACTTG CAAAAGCTTACATGGACACTAGGCCATCAAAGGTGTCACCGACAATTCTTAGTTCGCAAA GTCAAGTTGTGAGAGTAGATACACCGGTGCTAAAAAGTGTTGCATATTCCCAAAATTTGC CTATTGCACCAGTGACTACAAAGACTGCTGGTCTTGTTGGGGTCCGAGCAAATGGATTTA CCCCTCCAAGGTCTCGTGGAAGATCTGCAATATATCACATGGCTCGCACACCATACTCCA GACTTCGTCTAACTGATGGTCAAATGGCAAGTAGCTCCACACATAATGCTTATAGCGGGC CTTCTTTATCTGAGTCAGTCTTGGAGCATGATGGATATTTTGGCTCTAAACAGCCCCTCA AACGGAGAAGTTCTGCTCTGGAAGATGATATCGGCTCTGTTGGCCCCATTCGTAGGACTC GACAGAAACCAAATCTCCTATCACATGGAATTTCACGTCCTAATCTTGGAGGAGTTGCTT CTGCTGCTGCTGATGTTCCTACAAGGTATGCTCACATCTCTTCCGATCCCAGTGAGACAG CTGCAAAGATATTGGAGCATCTTGAAAATCTGACTCCAAAGGAGAAGTCATCAGAATCAA GACTAACTGCAGGGAGTGATAAGACACCCAAGAAATTGTCACCAAACATGCTTCGCGGGC AAGCTCTTAAAAGCTTGGAGTCTTTGGATTCTCCCAAGCTGCTACAGAGTGCTCAAGACA GCCATAAGTTGGAAAATTGGTCTGAGGTTATTCCAACCAATGATCATGATTCTAGTTTGC AGAAGCAAGGCGTAATTGAACAACATCGGCAAAATAAATCTATTAACAGGCCAACTGTTG TACCAAAGAAAAATGAAAAAAATTCATTTGAAGATGCTCAACCAGGTGTGGAAACTGCTG ATTCACTGGATAAGAAGTCTTCAGTTCAACCTCAGAAGAAGCATGCTTTTAGGATGAGTG CACTTGAGGACTCATTCGAGATGGATGAGGATATAAACTTTGACAATCCTGCCTCTCAAT TGGCTGAAGGAAGAGATAAGATGGGTATATCTGGTGCTGAAAAGAAGTCTCTGTCTACCG ATGAAGCCCTGAACAAAAAACCTGCTGCTCTTTCTGAAACAAATGCTACCTTGGGGATTT TGAACAAAAGAAATGATATGAAGGCTCCTGATGCTGCTCTTATCAGCATCAGCAGCCCCA GTTTCCTGTCCAGTTCTGATTCCCAGTCACCCGAGGTTGTTGCACCATCATTTGGGTTAA ACAAATCAAAGGAGTCGAGTGGTGACAAGGTTCCAGCTCTTCTATTTTCATCATCATTTC CTCTCTCAGGGTTAAAACCAGAAAGCTCGAGCAGCTTATCAAACCCTGCTTTTGGCCTGG CTGGTGCTTCATTGGAACTCTTTGAGTCAGATAACTCACAGAAGGATGGGAAAAGCAATG AGAAATCAGAACCTTTATCATCTGGTTTATCACCTTCACCTTTATTTGCTGCTCCATCAA GCACTTCTACCTTCAGTAATGGACAGTTCGCACCTAGTCCTGCTATCTCAGCCTTTTCTC TCTTGGATTCAAGTAATTCCCCAAAGGATGTTCAGTCTTACAGTTCAAGTGAGGTTGCCC ATTCCACAAGCATTTCAGCTGCTGTTGGTGGTGGTCTGTTTGGTTTTGCTGCAGCATCTT CAGTATCAACTGAACCTCTTATCAAATCTGGGCCCTCTGAAGTTCCATCAATGGTGTCAA AGCTTTTAACAGCTTCCACTGCAGACAACGCAGACTTGCAAACCAAAGCAGCTAATTCTG ACAATTTGAGTAGCAGTTCACCTTTTTTCATCAGGAATGTCTACAGTTACTACAGCTAGT GACCAATCTCAGAGTTCCGTTTTCAGCACTGGAGCTCAGTCACTTGTTAGTGCTCAAACT TCACTCACTGGATCAGACAATACCAGAGTCTCACAGAGTGTTCCTGCTCATTTTGGGTCA TCTACTACATCACCAGTAGTGGGCAATTCCAGAATGACATCTTTCTCCTCTGTCGGTTCT GCTTCAAGTAATACTGGCATCGTTTCTGCTGCTGCTTCAGATAGCAACCCCGTTGGCTCC AGCGCTGCTGCTGTTGGAAATTTTGGTTTTGGGGCAAGTTCTTCAACCTCATCTACGTTG AGC