Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc05g055090.3.1
CDS Infomation	Ubiquitin carboxyl-terminal hydrolase 12 (AHRD V3.3 *** UBP12_ARATH)
Sequence	ATGACTCTGCTCACGCCTCCTCCGGTAGATCCAGAAGACCACGAAATGCTTGTTCCTAGT TCTGACTTTCCTACCGAGGGACCCCTGCCTGTGGAAGTTTTGGCAGGTGCACCAGCAGAC ACAACAAATACGGTTGATGCACAAGCGGTGGATGATCCGGCATCAGCCCGGTTCACATGG ACTGTCGAAAAATTTTCGAGGTTGAATGTGAAGAAGTTGTACTCTGATCCTTTTAACGTA GGAGGATTTAAATGGAGGATTCTGATATTCCCAAAAGGGAACAATGCAGACCATTTGTCA ATGTATTTAGATGTGGCGGATGCTGCAACATTGCCTTATGGTTGGAGTAGATTTGCTCAG TTTAGCTTAGCTGTTATCAACCGAATGAATAACAAGTTAACAGTAAAGAAAGATACTCAG CACCAGTTTAATGCAAGGGAGAGTGACTGGGGTTTCACATCATTCATGCCTCTTAGTGAA CTATATGATCCTGGGAAAGGTTATCTTATGGATGATACCGTCATAATTGAAGCTGATGTT GCTGTCCGTAAAGTCGCTGATTACTGGTCCCATGACTCTAAAAAAGAGACTGGTTATGTT GGCCTTAAGAATCAGGGAGCCACTTGTTATATGAACTCTCTCCTCCAGACACTATACCAT ATTCCTTATTTTAGAAAGGCTGTGTATCACATGCCAACAACTGAGAATGACAATCCATCT GGCAGCATCCCTTTAGCTTTGCAGAGTTTGTTTTATAAGCTCCAGTATAACGACACTAGT GTAGCAACAAAAGAATTAACAAAGTCCTTTGGGTGGGACACCTATGAGTCTTTCATGCAG CATGATGTACAAGAACTTAACAGGGTTCTTTGTGAAAAGCTCGAAGATAAGATGAAGGGA ACTGTTGTAGAGGGCACAATACAACAATTACTTGAGGGGCATCATATGAATTACATTGAA TGTATCCGTGTGGACTACAAATCAACAAGAAAAGAATCTTTTTATGATCTTCAGCTTGAT GTGAAAGGGTGTCGTGATGTATATGCTTCATTTGACAAGTATGTTGAAGTGGAACGCCTC GAGGGCGACAACAAATACCAAGCAGAACAACATGTTTTACAGGATGCTCGGAAAGGTGTC CTTTTCATTGACTTCCCTCCTGTTCTTCAACTTCAGTTAAAACGCTTTGAATACGATTTT GTGCGGGATGCTATGATCAAGATAAATGATCGATATGAGTTCCCATTGCAACTCGATCTT GATAGAGAGAATGGAAAATATTTATCTCCAGATGCTGATCGAAGTGTCCGCAATCTCTAT TCTCTGCACAGTGTTTTAGTTCACAGCGGTGGGGTGCACGGGGGACACTATTACGCATAT ATCAGGCCTACACTGTCTGATCAGTGGTATAAATTTGATGATGAGCGTGTGACAAAAGAA GATACAAAGAGAGCACTGGATGAACAATACGGTGGTGAGGAAGAGTTACCCCACACAAAT CCTGGGTTCAATAATTCACCATTTAAATTTACAAAATATTCAAATGCGTATATGCTTGTC TATATACGTGAAAGTGACAAGGAAAAGATCATATGCGATGTGGATGAGAAGGACATAGCC GAGCATCTCAGGATAAGACTAAAGAAGGAGCAAGAAGAAAAAGAACAAAAGAGAAAGGAG AAAGCAGAGGCTCACCTCTATACAATCATTAAGGTAGCTCGTGATGAAGACCTTGGTGAA CAAATTGGAAAGGAGATCTATTTTGATCTTGTGGATCATGATAAAGTGCATAGTTTTCGT ATTCAGAAGCAGATGCCATTTGCTCAATTCAAGGAGGAAGTTGCTAAGGAATTTGGCATA CCAGTTCAATTTCAACGTTACTGGCTATGGGCAAAGCGCCAGAACCATACGTATCGGCCT AATCGGCCATTGACAGCTCAAGAGGAACTTCAATCTGTGGGCCAACTGAGGGAGGTTTCA AATAAAGCGAATCATGCTGAGCTAAAATTGTTCTTGGAAGTAGAATTTGGCCTGGATTTG CAACCTCTTCCTCCACTAGAGAAGACCAAGGATGATATCCTTCTCTTTTTCAAACTCTAT GACCCTTCGAAAGAGGAGATAAGGTATGTTGGACGGATTTTTGTAAAAGGAAGTGGCAAG CCGCTGGAGATACTTGCAAAGCTAAATGAGTTGGCTGGCTTTTTGCCTGATGAAGAAATT GAACTTTTTGAGGAAATAAAATTTGAACCAAATGTGATGTGTGAACACATTAACATGAAT CTGAGTTTTCGTGGCTGTCAGCTAGAAGATGGGGACATTATTTGTTTTCAGAAATCCCTT CGGAAGCAAGGGAATGAACAATATCGCTTTCCAGAGGTTCCTTCATTTTTGGAGTACGTG CACAATCGCCAGATTGTTCGTTTTCGCTCATTGGAGAAACCCAAGGAGGACGAGTTCAGT CTTGAGTTGTCAAAGCAAAACAACTATGATGAAGTTGTTGAATGCTTAGCTCGCCATCTT CGCTTGGATGATCCATCAAGAGTAAGGCTTACACCACATAACTGCTACTCACAACAGCCA AAACCTCAGCCAATAAGGTATCGTGGAGTTGATCGTCTCACAGAAATGCTTAGTCACTAT AATCAGACTTCAGATGTTTTGTATTATGAAGTCCTGGATATTCCTTTACCAGAACTTCAG GGCTTAAAAACTCTCAAAGTTACTTTTCATCATTCTGCCAAGGATGAAGTGACTATCCAT ACTATCAGATTGCCAAAACAAAGTACCATAGCAGATGTTCTTAATGATCTGAAAACGAAG GTTGAATTGTCACGGCCGGATGCTGAACTAAGATTGCTTGAAGTTTTTTACCACAAGATA TATAAGATTTTCCCCCTTAATGAAAGGATTGAAAACATAAATGATCAATACTGGACGCTA CGTGCAGAGGAGATTCCTGAAGAGGAGAAAAACCTGGGTGCTCATAGTCGCTTAATTCAT GTTTATCATTTTATAAAGGAGGCGACTCAAAATCAAACACAAGTTTTGAACTTTGGTGAG CCCTTTTTCCTAGTTATTCATGAGGGTGAGACATTGACTGAGGTTAAAGCTCGCATTCAG AAAAAATTGCAGGTTCCAGATGAAGAGTTTTCGAAGTGGAAATTTGCATTTTTGTCCATG GGTCGTCCCGAGTACCTGGAGGAATCGGATATCATTTTCAACCGTTTTCAGAAAAGAGAT GTGTATGGTGCTTGGGAGCAGTACCTTGGATTAGAGCACACTGACTGTCCTCCAAAACGA TCATATTCTGCCCACCAGAACCGTCACAATTTTGAGAAGCCTGTTCGGATCTACAACTAG

Peptide Sequence

PEP ID	Solyc05g055090.3.1
PEP Infomation	Ubiquitin carboxyl-terminal hydrolase 12 (AHRD V3.3 *** UBP12_ARATH)
Sequence	MTLLTPPPVDPEDHEMLVPSSDFPTEGPLPVEVLAGAPADTTNTVDAQAVDDPASARFTW TVEKFSRLNVKKLYSDPFNVGGFKWRILIFPKGNNADHLSMYLDVADAATLPYGWSRFAQ FSLAVINRMNNKLTVKKDTQHQFNARESDWGFTSFMPLSELYDPGKGYLMDDTVIIEADV AVRKVADYWSHDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDNPS GSIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYESFMQHDVQELNRVLCEKLEDKMKG TVVEGTIQQLLEGHHMNYIECIRVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERL EGDNKYQAEQHVLQDARKGVLFIDFPPVLQLQLKRFEYDFVRDAMIKINDRYEFPLQLDL DRENGKYLSPDADRSVRNLYSLHSVLVHSGGVHGGHYYAYIRPTLSDQWYKFDDERVTKE DTKRALDEQYGGEEELPHTNPGFNNSPFKFTKYSNAYMLVYIRESDKEKIICDVDEKDIA EHLRIRLKKEQEEKEQKRKEKAEAHLYTIIKVARDEDLGEQIGKEIYFDLVDHDKVHSFR IQKQMPFAQFKEEVAKEFGIPVQFQRYWLWAKRQNHTYRPNRPLTAQEELQSVGQLREVS NKANHAELKLFLEVEFGLDLQPLPPLEKTKDDILLFFKLYDPSKEEIRYVGRIFVKGSGK PLEILAKLNELAGFLPDEEIELFEEIKFEPNVMCEHINMNLSFRGCQLEDGDIICFQKSL RKQGNEQYRFPEVPSFLEYVHNRQIVRFRSLEKPKEDEFSLELSKQNNYDEVVECLARHL RLDDPSRVRLTPHNCYSQQPKPQPIRYRGVDRLTEMLSHYNQTSDVLYYEVLDIPLPELQ GLKTLKVTFHHSAKDEVTIHTIRLPKQSTIADVLNDLKTKVELSRPDAELRLLEVFYHKI YKIFPLNERIENINDQYWTLRAEEIPEEEKNLGAHSRLIHVYHFIKEATQNQTQVLNFGE PFFLVIHEGETLTEVKARIQKKLQVPDEEFSKWKFAFLSMGRPEYLEESDIIFNRFQKRD VYGAWEQYLGLEHTDCPPKRSYSAHQNRHNFEKPVRIYN*

Transcript Sequence

Transcript ID	Solyc05g055090.3.1
Transcript Infomation	Ubiquitin carboxyl-terminal hydrolase 12 (AHRD V3.3 *** UBP12_ARATH)
Sequence	AGTGTTGTCATAATTGCCAAATTACCCTCAATATAAACCTCTCTTGCTTTCTTCACTACC TCTTCTTCATTTTTTCAGTCCTTGCACTCATTTACTCAACACAAAGTCTTTCGATCCATC GCCTTCTCCAAATCCTCTGAATTCTCAATTCTCCGATTCGCCGGACGATCGTACGGTTAA TTTTTTCCGGCAATGACTCTGCTCACGCCTCCTCCGGTAGATCCAGAAGACCACGAAATG CTTGTTCCTAGTTCTGACTTTCCTACCGAGGGACCCCTGCCTGTGGAAGTTTTGGCAGGT GCACCAGCAGACACAACAAATACGGTTGATGCACAAGCGGTGGATGATCCGGCATCAGCC CGGTTCACATGGACTGTCGAAAAATTTTCGAGGTTGAATGTGAAGAAGTTGTACTCTGAT CCTTTTAACGTAGGAGGATTTAAATGGAGGATTCTGATATTCCCAAAAGGGAACAATGCA GACCATTTGTCAATGTATTTAGATGTGGCGGATGCTGCAACATTGCCTTATGGTTGGAGT AGATTTGCTCAGTTTAGCTTAGCTGTTATCAACCGAATGAATAACAAGTTAACAGTAAAG AAAGATACTCAGCACCAGTTTAATGCAAGGGAGAGTGACTGGGGTTTCACATCATTCATG CCTCTTAGTGAACTATATGATCCTGGGAAAGGTTATCTTATGGATGATACCGTCATAATT GAAGCTGATGTTGCTGTCCGTAAAGTCGCTGATTACTGGTCCCATGACTCTAAAAAAGAG ACTGGTTATGTTGGCCTTAAGAATCAGGGAGCCACTTGTTATATGAACTCTCTCCTCCAG ACACTATACCATATTCCTTATTTTAGAAAGGCTGTGTATCACATGCCAACAACTGAGAAT GACAATCCATCTGGCAGCATCCCTTTAGCTTTGCAGAGTTTGTTTTATAAGCTCCAGTAT AACGACACTAGTGTAGCAACAAAAGAATTAACAAAGTCCTTTGGGTGGGACACCTATGAG TCTTTCATGCAGCATGATGTACAAGAACTTAACAGGGTTCTTTGTGAAAAGCTCGAAGAT AAGATGAAGGGAACTGTTGTAGAGGGCACAATACAACAATTACTTGAGGGGCATCATATG AATTACATTGAATGTATCCGTGTGGACTACAAATCAACAAGAAAAGAATCTTTTTATGAT CTTCAGCTTGATGTGAAAGGGTGTCGTGATGTATATGCTTCATTTGACAAGTATGTTGAA GTGGAACGCCTCGAGGGCGACAACAAATACCAAGCAGAACAACATGTTTTACAGGATGCT CGGAAAGGTGTCCTTTTCATTGACTTCCCTCCTGTTCTTCAACTTCAGTTAAAACGCTTT GAATACGATTTTGTGCGGGATGCTATGATCAAGATAAATGATCGATATGAGTTCCCATTG CAACTCGATCTTGATAGAGAGAATGGAAAATATTTATCTCCAGATGCTGATCGAAGTGTC CGCAATCTCTATTCTCTGCACAGTGTTTTAGTTCACAGCGGTGGGGTGCACGGGGGACAC TATTACGCATATATCAGGCCTACACTGTCTGATCAGTGGTATAAATTTGATGATGAGCGT GTGACAAAAGAAGATACAAAGAGAGCACTGGATGAACAATACGGTGGTGAGGAAGAGTTA CCCCACACAAATCCTGGGTTCAATAATTCACCATTTAAATTTACAAAATATTCAAATGCG TATATGCTTGTCTATATACGTGAAAGTGACAAGGAAAAGATCATATGCGATGTGGATGAG AAGGACATAGCCGAGCATCTCAGGATAAGACTAAAGAAGGAGCAAGAAGAAAAAGAACAA AAGAGAAAGGAGAAAGCAGAGGCTCACCTCTATACAATCATTAAGGTAGCTCGTGATGAA GACCTTGGTGAACAAATTGGAAAGGAGATCTATTTTGATCTTGTGGATCATGATAAAGTG CATAGTTTTCGTATTCAGAAGCAGATGCCATTTGCTCAATTCAAGGAGGAAGTTGCTAAG GAATTTGGCATACCAGTTCAATTTCAACGTTACTGGCTATGGGCAAAGCGCCAGAACCAT ACGTATCGGCCTAATCGGCCATTGACAGCTCAAGAGGAACTTCAATCTGTGGGCCAACTG AGGGAGGTTTCAAATAAAGCGAATCATGCTGAGCTAAAATTGTTCTTGGAAGTAGAATTT GGCCTGGATTTGCAACCTCTTCCTCCACTAGAGAAGACCAAGGATGATATCCTTCTCTTT TTCAAACTCTATGACCCTTCGAAAGAGGAGATAAGGTATGTTGGACGGATTTTTGTAAAA GGAAGTGGCAAGCCGCTGGAGATACTTGCAAAGCTAAATGAGTTGGCTGGCTTTTTGCCT GATGAAGAAATTGAACTTTTTGAGGAAATAAAATTTGAACCAAATGTGATGTGTGAACAC ATTAACATGAATCTGAGTTTTCGTGGCTGTCAGCTAGAAGATGGGGACATTATTTGTTTT CAGAAATCCCTTCGGAAGCAAGGGAATGAACAATATCGCTTTCCAGAGGTTCCTTCATTT TTGGAGTACGTGCACAATCGCCAGATTGTTCGTTTTCGCTCATTGGAGAAACCCAAGGAG GACGAGTTCAGTCTTGAGTTGTCAAAGCAAAACAACTATGATGAAGTTGTTGAATGCTTA GCTCGCCATCTTCGCTTGGATGATCCATCAAGAGTAAGGCTTACACCACATAACTGCTAC TCACAACAGCCAAAACCTCAGCCAATAAGGTATCGTGGAGTTGATCGTCTCACAGAAATG CTTAGTCACTATAATCAGACTTCAGATGTTTTGTATTATGAAGTCCTGGATATTCCTTTA CCAGAACTTCAGGGCTTAAAAACTCTCAAAGTTACTTTTCATCATTCTGCCAAGGATGAA GTGACTATCCATACTATCAGATTGCCAAAACAAAGTACCATAGCAGATGTTCTTAATGAT CTGAAAACGAAGGTTGAATTGTCACGGCCGGATGCTGAACTAAGATTGCTTGAAGTTTTT TACCACAAGATATATAAGATTTTCCCCCTTAATGAAAGGATTGAAAACATAAATGATCAA TACTGGACGCTACGTGCAGAGGAGATTCCTGAAGAGGAGAAAAACCTGGGTGCTCATAGT CGCTTAATTCATGTTTATCATTTTATAAAGGAGGCGACTCAAAATCAAACACAAGTTTTG AACTTTGGTGAGCCCTTTTTCCTAGTTATTCATGAGGGTGAGACATTGACTGAGGTTAAA GCTCGCATTCAGAAAAAATTGCAGGTTCCAGATGAAGAGTTTTCGAAGTGGAAATTTGCA TTTTTGTCCATGGGTCGTCCCGAGTACCTGGAGGAATCGGATATCATTTTCAACCGTTTT CAGAAAAGAGATGTGTATGGTGCTTGGGAGCAGTACCTTGGATTAGAGCACACTGACTGT CCTCCAAAACGATCATATTCTGCCCACCAGAACCGTCACAATTTTGAGAAGCCTGTTCGG ATCTACAACTAGATAATCTCTGGAACTACTTCGAAGGTAAGGTTGCTGTTTTGCCAAGAA GGTGCACTAGGTTCAGCAGAAGATAACGGTTTGGCAGGTAAATGTGGGGATGTCAGCTTG GTTGTTGTATACATTTAGTCCTCCCGAGACGGTTAAACATTTGTGCTGAGATTTCACAAA GCAATCACCCGTTTTTCGGCTGAGGGTGTTTGCTGGTAAAATTGGCTTCTGTCAGTTGTA ATGTAGGCAAATCCATGCGATTTTGGATGAGTACATGTGTAGAGGGTACATATAATTGGC TTTGACTCTCCTATACTTAGAACATCGGTTTCGACTTTATCCTATATTTAGACAAAAATA TCAAAGCCATACATTTCTTTAAGAATTTTCTGATTTTCTTAAGGTATAGGCCGAATAGGA AAATCTGTAAAATGTTAGATCATATTTAGTTTCTTGGTTTCCCGTAATTGTGCAACAATG GTTGTTTATGATGCTTTTAGTTCCCATTTTTCGCTTGATCTAAG