Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc05g055020.3.1
CDS Infomation	LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) (AHRD V3.3 *** AT5G28490.1)
Sequence	ATGGATTTTGTCACAGCACAAGGAAATAATTTCACTACATCTGGCAACAACATGGTTCAA GGTACAAACTTTATTGCCAACAGTACAACCATGATTGAGTCATCGGTTCCTCCGTTGAGT CGATATGAGAATCAGAAACGTCGCGATTGGAACACTTTTTGCCAGTATGTCAGAAACCAC CAACCCCCTCTTTCACTTCCTCAGTGCACTAGTGCACATATCCTGGAATTTCTCAGATAT CTGGACCAGTTCGGTAAAACTAAAGTCCACAACCAAAATTGTCCATTTTTTGGGCTACTA AATCCTCCAGCACCTTGTCCTTGTCCATTAAGGCAAGCATGGGGGAGCCTTGATGCACTA ATTGGTAGGCTTAGAGCTGCTTACGAAGAAAATGGTGGAAAGCCAGAAATGAACCCATTT GGTTCAAGAAATGTGAGGCTATTTTTAAGAGAAGTGAGGGATTTTCAATCTAAATCAAGA GGGGTTAGTTATGAAAAGAAGAGGAAGAGGACAACATCATCAACAAATAATAATAAGTCG AAAATAATAACAGTGATTGATGGTGGTGGTGATGGGTGTGGTACAGATAATCATAATGGT TTAATTATTGACTAA

Peptide Sequence

PEP ID	Solyc05g055020.3.1
PEP Infomation	LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) (AHRD V3.3 *** AT5G28490.1)
Sequence	MDFVTAQGNNFTTSGNNMVQGTNFIANSTTMIESSVPPLSRYENQKRRDWNTFCQYVRNH QPPLSLPQCTSAHILEFLRYLDQFGKTKVHNQNCPFFGLLNPPAPCPCPLRQAWGSLDAL IGRLRAAYEENGGKPEMNPFGSRNVRLFLREVRDFQSKSRGVSYEKKRKRTTSSTNNNKS KIITVIDGGGDGCGTDNHNGLIID*

Transcript Sequence

Transcript ID	Solyc05g055020.3.1
Transcript Infomation	LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) (AHRD V3.3 *** AT5G28490.1)
Sequence	ATGGATTTTGTCACAGCACAAGGAAATAATTTCACTACATCTGGCAACAACATGGTTCAA GGTACAAACTTTATTGCCAACAGTACAACCATGATTGAGTCATCGGTTCCTCCGTTGAGT CGATATGAGAATCAGAAACGTCGCGATTGGAACACTTTTTGCCAGTATGTCAGAAACCAC CAACCCCCTCTTTCACTTCCTCAGTGCACTAGTGCACATATCCTGGAATTTCTCAGATAT CTGGACCAGTTCGGTAAAACTAAAGTCCACAACCAAAATTGTCCATTTTTTGGGCTACTA AATCCTCCAGCACCTTGTCCTTGTCCATTAAGGCAAGCATGGGGGAGCCTTGATGCACTA ATTGGTAGGCTTAGAGCTGCTTACGAAGAAAATGGTGGAAAGCCAGAAATGAACCCATTT GGTTCAAGAAATGTGAGGCTATTTTTAAGAGAAGTGAGGGATTTTCAATCTAAATCAAGA GGGGTTAGTTATGAAAAGAAGAGGAAGAGGACAACATCATCAACAAATAATAATAAGTCG AAAATAATAACAGTGATTGATGGTGGTGGTGATGGGTGTGGTACAGATAATCATAATGGT TTAATTATTGACTAA