Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g055000.3.1
CDS Infomation

Cysteine desulfurase family protein (AHRD V3.3 *** B9HNK4_POPTR)
Sequence

ATGATAACAACGACGACGCCGATGGAAGGCGCAATGCTGAAACTACCGTGTCTCCGGTCG
GTTAGCCGGAACACTAATTTCACCAATCGAAGCTCCAATTCGTTCCCATGGAGTTACCGA
CGGTTACATATTTCAGCTTCAGCATCAGCATCAGCTTCAGCTCCATTAGTAGAAGGCCCG
AAACTTGGACCCGGTTCGCTAGGGCATATCACCCGTTCCGACTTCCCTATACTTCACCAG
GAGATAAATGGCTTGAAGCTTGTATATTTGGACAATGCTGCAACTTCCCAGAAGCCAAGA
GCTGTGATCGAAGCTTTGCAGAATTATTATGAAGCTTACAATTCCAATGTCCACCGGGGC
ATTCATTATTTGAGTGCAAAGGCGACAGATGAGTATGAGTCAGCAAGACAAAAGGTGGCA
AATTTCATTCACGCGGCCGAAGCTAAAGAGATCATTTTTACAAGAAATGCTACTGAGGCT
ATCAACTTAGTGGCTTATTCTTGGGGACTCTCAAACTTGAAACCAGGAGATGAGATTATA
ACCACAATAGCTGAACATCACAGTGCAATTGTTCCCTGGCAAATTGTTGCTCAAAAGACT
GGTGCTGTCCTGAGGTTTGTAAATTTGACAGAGGATGAAGTTCCAGATGTAGGGCAATTA
AGAGACTCTCTCTCAAGCAGCACAAAACTTTTGGTCATGCATCATGTCTCGAATATGTTA
GCTTCTGTTCTTCCTATGGATGAAGTCATAAGTTGGGCACATGATGTTGGAGCAAAAGTG
CTTGTAGATGCTTGTCAAAGTGTCCCACACATGGTGGTCGATGTTAAGAATCTAGACACT
GATTTTCTTGTTGGTTCCTCTCATAAGATGTGTGGGCCTACAGGCGTTGGATTCTTGTAT
GGCAAGAGCGAGATCCTTTCTGGCATGCCTCCTTTCCTTGGTGGTGGCGAAATGATAGCT
GATGTGTATTTGGATCATTCCACTTATGCTGAACCTCCTTCGAGATTTGAGGCTGGGACT
CCCGCAATTGGAGAAGCAATTGGGCTTGGAGCTGCAATTGATTATATTTCTGAAATTGGC
ATGCAACAGATTCATGATTATGAGATGGAGTTAGGTAATTATTTGTATGATCGCCTCTCT
TCTGTATCTGATGTTCGAATTTATGGGCCTGCACCTTCACGAACCGTTAAGCGAGCTGCT
CTTTGTTCTTTCAATGTTAAAGATATTCACCCTACTGATATCGCAACCTTCCTTGACCAA
CAGCATGGTGTAGCGATTAGATCAGGTCACCACTGTGCTCAACCTCTGCATCGACATTTG
GGAATCAATGCAAGTGCACGAGCTAGCCTTCATTTCTACAATACTAAAGACGACGTTGAC
AAATTCATCGATGCACTCAAGGACACAATCAACTTTTTCACTTCTTTCAAATGA

Peptide Sequence

PEP ID

Solyc05g055000.3.1
PEP Infomation

Cysteine desulfurase family protein (AHRD V3.3 *** B9HNK4_POPTR)
Sequence

MITTTTPMEGAMLKLPCLRSVSRNTNFTNRSSNSFPWSYRRLHISASASASASAPLVEGP
KLGPGSLGHITRSDFPILHQEINGLKLVYLDNAATSQKPRAVIEALQNYYEAYNSNVHRG
IHYLSAKATDEYESARQKVANFIHAAEAKEIIFTRNATEAINLVAYSWGLSNLKPGDEII
TTIAEHHSAIVPWQIVAQKTGAVLRFVNLTEDEVPDVGQLRDSLSSSTKLLVMHHVSNML
ASVLPMDEVISWAHDVGAKVLVDACQSVPHMVVDVKNLDTDFLVGSSHKMCGPTGVGFLY
GKSEILSGMPPFLGGGEMIADVYLDHSTYAEPPSRFEAGTPAIGEAIGLGAAIDYISEIG
MQQIHDYEMELGNYLYDRLSSVSDVRIYGPAPSRTVKRAALCSFNVKDIHPTDIATFLDQ
QHGVAIRSGHHCAQPLHRHLGINASARASLHFYNTKDDVDKFIDALKDTINFFTSFK*

Transcript Sequence

Transcript ID

Solyc05g055000.3.1
Transcript Infomation

Cysteine desulfurase family protein (AHRD V3.3 *** B9HNK4_POPTR)
Sequence

AAGTAAGGAGTTTAATGTAATTTCAATAAAACAAGGCAAGGATAACAACGTGTAGTAGTT
GCAGTTCACACAGCCGACGATGATAACAACGACGACGCCGATGGAAGGCGCAATGCTGAA
ACTACCGTGTCTCCGGTCGGTTAGCCGGAACACTAATTTCACCAATCGAAGCTCCAATTC
GTTCCCATGGAGTTACCGACGGTTACATATTTCAGCTTCAGCATCAGCATCAGCTTCAGC
TCCATTAGTAGAAGGCCCGAAACTTGGACCCGGTTCGCTAGGGCATATCACCCGTTCCGA
CTTCCCTATACTTCACCAGGAGATAAATGGCTTGAAGCTTGTATATTTGGACAATGCTGC
AACTTCCCAGAAGCCAAGAGCTGTGATCGAAGCTTTGCAGAATTATTATGAAGCTTACAA
TTCCAATGTCCACCGGGGCATTCATTATTTGAGTGCAAAGGCGACAGATGAGTATGAGTC
AGCAAGACAAAAGGTGGCAAATTTCATTCACGCGGCCGAAGCTAAAGAGATCATTTTTAC
AAGAAATGCTACTGAGGCTATCAACTTAGTGGCTTATTCTTGGGGACTCTCAAACTTGAA
ACCAGGAGATGAGATTATAACCACAATAGCTGAACATCACAGTGCAATTGTTCCCTGGCA
AATTGTTGCTCAAAAGACTGGTGCTGTCCTGAGGTTTGTAAATTTGACAGAGGATGAAGT
TCCAGATGTAGGGCAATTAAGAGACTCTCTCTCAAGCAGCACAAAACTTTTGGTCATGCA
TCATGTCTCGAATATGTTAGCTTCTGTTCTTCCTATGGATGAAGTCATAAGTTGGGCACA
TGATGTTGGAGCAAAAGTGCTTGTAGATGCTTGTCAAAGTGTCCCACACATGGTGGTCGA
TGTTAAGAATCTAGACACTGATTTTCTTGTTGGTTCCTCTCATAAGATGTGTGGGCCTAC
AGGCGTTGGATTCTTGTATGGCAAGAGCGAGATCCTTTCTGGCATGCCTCCTTTCCTTGG
TGGTGGCGAAATGATAGCTGATGTGTATTTGGATCATTCCACTTATGCTGAACCTCCTTC
GAGATTTGAGGCTGGGACTCCCGCAATTGGAGAAGCAATTGGGCTTGGAGCTGCAATTGA
TTATATTTCTGAAATTGGCATGCAACAGATTCATGATTATGAGATGGAGTTAGGTAATTA
TTTGTATGATCGCCTCTCTTCTGTATCTGATGTTCGAATTTATGGGCCTGCACCTTCACG
AACCGTTAAGCGAGCTGCTCTTTGTTCTTTCAATGTTAAAGATATTCACCCTACTGATAT
CGCAACCTTCCTTGACCAACAGCATGGTGTAGCGATTAGATCAGGTCACCACTGTGCTCA
ACCTCTGCATCGACATTTGGGAATCAATGCAAGTGCACGAGCTAGCCTTCATTTCTACAA
TACTAAAGACGACGTTGACAAATTCATCGATGCACTCAAGGACACAATCAACTTTTTCAC
TTCTTTCAAATGAAGGTATGTTTATGTTCTCTAGTGTACCTTAAGGCACATGTAACATAA
GTAAAAAACTTATAATTATCTCAATTTAAAGGTGTGATTCGTGAATAAATTGACTTCAAG
GAGTTTGAATTATTGTAAATTAGGTACTAATATCAATAACTTATTACGATTCATTTCAAT
TGTTTTGGCTTTAGATTTCATATATACTTTTACCATCAAATGTCATTACGATTCATTTC