Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc05g054930.3.1
CDS Infomation	CAP-gly domain linker (AHRD V3.3 *** AT3G55060.2)
Sequence	ATGAAGAAATTCTTCTTTTTCCGGACATCATCTAATGATGCAAACAACCCTTCACCACCA TCAAAGGAGAAGTCATCTAACAGTATTGACAAATCACAAAGCAGTAAGGAGGCTTCTTCT CCAAGTCTTAGAAGGAGTCTTTCATTGTCCTCTGGATCCTTTTACGACAGTGGGTCAGGA AAAAAGAATTTCAGGGATCCAAGCAGATCTCCATGTCACAGTAAGAAAGTTCATCCTAAG AAATCTGGTCGTGATTCATGCCGTAGTCGTGCACGTACTCCTGAGAGGCAACCCCCAGAT AATTTCTTTCAGAGACATGATATGGAAAATGGTTATTTGGTAAGGAAGCACAGTTCTGGT GCATCTTTCAGTACACACCACTATGATCCATCAGAGAGCTCTTCTCATAGCTCCAGTAAT GTCTCTAGTAAGGTTTTAGATCGTTATATAGATGGGGAGCAAGAGCAGGAAAAGAGGGCC TCAGCTAACCTCTTTCCTTCGGAAGATGATCTTGAGATTGGGTATGCCTGCACACAGCTG CCTCCAAGAGTTCACCTTACAGCTCCTGGTTCGCCACTACCTGATGTCAGGAAGCAGAGA CCAACGTCTCAATCTTTCAGAGAAACAAAACCATCTAAACTTTGTTTTACGTCTGGAGAG TTGGGTGATACAGGTTTTGAGCATGAATCTCCGCGAAAACTTGCAAAGAAGGTGGTTGAG AGGCTCTCTCAGTCTCGGTCAATGGCAAAAATAAGTTCAGAAGATTTTGATTCTGATGGC CCAATTACTATTGAAGATATCTACAGTGGAAATCTGAGTAGATGTCCAAGTGTATGTTCT GATGGTGTTCCCCGGAAGAGCTGTTCAGCAGATGATCCTAATGCTAGGACCTACGAATAT CACCACGAAGCGATTCCAGGCCTTGATGAGAAAAACTATTTGGGAATGGAAGACAATTCA GATTTGGTACTATTGAGAAAACTTAAGGAAGCTGAGGAGCGTGCTGTGCTGCTCTCAGAA GAGCTTGAAGATGGAAAATTTCTTCATGGCAGAGGCCTTAGTGTTCCAGTGTTGATTCAG ACTATTAGAAGCTTGACAGAGGAGAAGTTACAAATGGCTGTTGAAGTTTCAAGCATGCTA CAGGATCAAGTTGCTGAAAGGGCTTCTGCTAAGGAAGAAGCCAGACGATTGCAGGAAGAA TTAGATTCACGGACACGAAGATTGGAGATGGAGAAGAATGAGTTACAATCAGCTCTGGAA AAGGAGTTGGATAGAAGATCCAGCGAGTGGTCTCTAAAACTAGAGAAGTACCAAATTGAA GAACATAGACTCCGTGAAAGGGTGAGAGAGCTGGCAGAGCAGAATGTCTCTCTACAAAGG GAAGTCTCTTCATTTAATGAGAAGGAATTGGATAATAGAAGCAAAATATCATTCTCAGAG AAACAACTTGAAGATTTGTCTAAGAGAGTTGAGGAAGTGTCTGAGGAGAATCAAAATCTA AGGCAGCAGCTTTCTCAGTTACAAGAGGAATATCGAGTAGCTCAAGATGACCGAGAATAT GTCAGGGAAAACTACCAGGAAAAGGTTAAAGAATGTGAGGACCTGCACAGATCTATTGCT AGATTGCAAAGGACTTGCAATGAACAAGAGAAGACAATTGATGGTCTGCGAGGATTTTGT GAGGATGTTGGCAAGAAGACTCCAGCAAACTATGATAACCAGTTGGAGAAGTTGCAAGTA GAGCAAATTAGATTGGTAGGTGTGGAACGTGCTCTAAGGAAGGAGGTGGACTCTTTTCGG ATCCAGATTGATTCTCTACGACATGAAAATATTAGCTTGTTGAATCGTTTAAGAGGCAAC GGAAAGGAGGGTGGGTTTTCAACTTTTAGGCTAGATCAGGAATTATGCAATCGTGTATGC TGCTTGCAAAATCAGGGGCTTAATATGCTGAGGGAGAGCAGCCAGCTTTGTGGAAAGCTA TTAGAGTACACAAAAGAAAATGTGAGACAAAATGGGGGAATTGATGGTCAATTCTTAATT GAATGCAATGTAAAGATCCAGGGTTTTAAGAGGGGAATTGAAACTCTGACAAGCAGCTTG CAGACGGTGTCATCTGTGATAAATGAGAAGTCCCACCCAGTAAATTCAGATTCTCAGCCA TCTAGCAAGGGTGATGCATTTCACCAGCAAAACAGTCAGAAACCAGATGAAATTAAGCAA TCAGAGCTCAAATCGGAGACTTTGCTGACAGCTGTGTTGAGGGAGAAGCTTTATTCCAAG GAGATGGATATAGAGCAACTTCAGGCTGATCTGGCAGCAGCAGTCAGAGGTAACGATATC CTCAAATGTGAAGTTCAAAATGCGCTGGACACTCTTTCTTGTGCCAAACACAAGTTGAAA GATCTCGAGCTTCAGATGATAAAAAAGGACGAAAATATCAACCAGCTCCAGAATGATTTG CAAGAATGCATGAAGGAACTTAGCCTCATGAAGGGGATACTACCAAAAGTATCTCAGGAA AGAGATTACATGTGGGAGGAAGTTAAGAACTACAGTGAGAAGAACATGTTGTTGAACTCT GAGGTCAACACGTTGAAAAAGAAGGTAGAGACGCTCGATGAAGACATACTTATGAAAGAA GGTCAAATCACAATCTTGAAGGACAGCTTAGGCAAACCTTTCGATCTTCTTTCAAGTCCT GATTCTACTAGAGAATTCCTGTTGGAGTGA

Peptide Sequence

PEP ID	Solyc05g054930.3.1
PEP Infomation	CAP-gly domain linker (AHRD V3.3 *** AT3G55060.2)
Sequence	MKKFFFFRTSSNDANNPSPPSKEKSSNSIDKSQSSKEASSPSLRRSLSLSSGSFYDSGSG KKNFRDPSRSPCHSKKVHPKKSGRDSCRSRARTPERQPPDNFFQRHDMENGYLVRKHSSG ASFSTHHYDPSESSSHSSSNVSSKVLDRYIDGEQEQEKRASANLFPSEDDLEIGYACTQL PPRVHLTAPGSPLPDVRKQRPTSQSFRETKPSKLCFTSGELGDTGFEHESPRKLAKKVVE RLSQSRSMAKISSEDFDSDGPITIEDIYSGNLSRCPSVCSDGVPRKSCSADDPNARTYEY HHEAIPGLDEKNYLGMEDNSDLVLLRKLKEAEERAVLLSEELEDGKFLHGRGLSVPVLIQ TIRSLTEEKLQMAVEVSSMLQDQVAERASAKEEARRLQEELDSRTRRLEMEKNELQSALE KELDRRSSEWSLKLEKYQIEEHRLRERVRELAEQNVSLQREVSSFNEKELDNRSKISFSE KQLEDLSKRVEEVSEENQNLRQQLSQLQEEYRVAQDDREYVRENYQEKVKECEDLHRSIA RLQRTCNEQEKTIDGLRGFCEDVGKKTPANYDNQLEKLQVEQIRLVGVERALRKEVDSFR IQIDSLRHENISLLNRLRGNGKEGGFSTFRLDQELCNRVCCLQNQGLNMLRESSQLCGKL LEYTKENVRQNGGIDGQFLIECNVKIQGFKRGIETLTSSLQTVSSVINEKSHPVNSDSQP SSKGDAFHQQNSQKPDEIKQSELKSETLLTAVLREKLYSKEMDIEQLQADLAAAVRGNDI LKCEVQNALDTLSCAKHKLKDLELQMIKKDENINQLQNDLQECMKELSLMKGILPKVSQE RDYMWEEVKNYSEKNMLLNSEVNTLKKKVETLDEDILMKEGQITILKDSLGKPFDLLSSP DSTREFLLE*

Transcript Sequence

Transcript ID	Solyc05g054930.3.1
Transcript Infomation	CAP-gly domain linker (AHRD V3.3 *** AT3G55060.2)
Sequence	GATGATTGCAATTTGAGGTGGTAATTTATGTTTCATTCTTTGGTGTTCTGATATAATAAT TGATAAATTTGTGAAGTTCTTTTAGTTATCCTGTCTTAAATATGGATTATTAATAACAGG TGGATTTGAATGATTAAAGGGTGTTTCTAGGGTTTAGGGCCAGGGGTAGTGTGGTCTTTT ATGTTAAGGTAGACTATCATTGTAGATTGACAGAGTGTGCTCATTACTGTTCCTGACACT CATGATTTTTTAAAAATCAAGAGTAGGAAACAAATTGATTGAAATATGTAGGGGTCTTTT GAAAAATTTCTTGCTTTTTAAAAAGGGTTGGTGAAATAAATGTTCCATTTGCTTCTCCAT TGCTAAAACTTTATGGTAACTTATGTTACACACAGCAAGCTAATATGCTTTTACATTTGC TGCTTTGTGTTTGTTAGTGCTTGAAAACTAACTGATCCACTTGAGCCTCAGCACTAACAG ATTAATGTACAGTGTCCATAAATAGAGATGAAGAAATTCTTCTTTTTCCGGACATCATCT AATGATGCAAACAACCCTTCACCACCATCAAAGGAGAAGTCATCTAACAGTATTGACAAA TCACAAAGCAGTAAGGAGGCTTCTTCTCCAAGTCTTAGAAGGAGTCTTTCATTGTCCTCT GGATCCTTTTACGACAGTGGGTCAGGAAAAAAGAATTTCAGGGATCCAAGCAGATCTCCA TGTCACAGTAAGAAAGTTCATCCTAAGAAATCTGGTCGTGATTCATGCCGTAGTCGTGCA CGTACTCCTGAGAGGCAACCCCCAGATAATTTCTTTCAGAGACATGATATGGAAAATGGT TATTTGGTAAGGAAGCACAGTTCTGGTGCATCTTTCAGTACACACCACTATGATCCATCA GAGAGCTCTTCTCATAGCTCCAGTAATGTCTCTAGTAAGGTTTTAGATCGTTATATAGAT GGGGAGCAAGAGCAGGAAAAGAGGGCCTCAGCTAACCTCTTTCCTTCGGAAGATGATCTT GAGATTGGGTATGCCTGCACACAGCTGCCTCCAAGAGTTCACCTTACAGCTCCTGGTTCG CCACTACCTGATGTCAGGAAGCAGAGACCAACGTCTCAATCTTTCAGAGAAACAAAACCA TCTAAACTTTGTTTTACGTCTGGAGAGTTGGGTGATACAGGTTTTGAGCATGAATCTCCG CGAAAACTTGCAAAGAAGGTGGTTGAGAGGCTCTCTCAGTCTCGGTCAATGGCAAAAATA AGTTCAGAAGATTTTGATTCTGATGGCCCAATTACTATTGAAGATATCTACAGTGGAAAT CTGAGTAGATGTCCAAGTGTATGTTCTGATGGTGTTCCCCGGAAGAGCTGTTCAGCAGAT GATCCTAATGCTAGGACCTACGAATATCACCACGAAGCGATTCCAGGCCTTGATGAGAAA AACTATTTGGGAATGGAAGACAATTCAGATTTGGTACTATTGAGAAAACTTAAGGAAGCT GAGGAGCGTGCTGTGCTGCTCTCAGAAGAGCTTGAAGATGGAAAATTTCTTCATGGCAGA GGCCTTAGTGTTCCAGTGTTGATTCAGACTATTAGAAGCTTGACAGAGGAGAAGTTACAA ATGGCTGTTGAAGTTTCAAGCATGCTACAGGATCAAGTTGCTGAAAGGGCTTCTGCTAAG GAAGAAGCCAGACGATTGCAGGAAGAATTAGATTCACGGACACGAAGATTGGAGATGGAG AAGAATGAGTTACAATCAGCTCTGGAAAAGGAGTTGGATAGAAGATCCAGCGAGTGGTCT CTAAAACTAGAGAAGTACCAAATTGAAGAACATAGACTCCGTGAAAGGGTGAGAGAGCTG GCAGAGCAGAATGTCTCTCTACAAAGGGAAGTCTCTTCATTTAATGAGAAGGAATTGGAT AATAGAAGCAAAATATCATTCTCAGAGAAACAACTTGAAGATTTGTCTAAGAGAGTTGAG GAAGTGTCTGAGGAGAATCAAAATCTAAGGCAGCAGCTTTCTCAGTTACAAGAGGAATAT CGAGTAGCTCAAGATGACCGAGAATATGTCAGGGAAAACTACCAGGAAAAGGTTAAAGAA TGTGAGGACCTGCACAGATCTATTGCTAGATTGCAAAGGACTTGCAATGAACAAGAGAAG ACAATTGATGGTCTGCGAGGATTTTGTGAGGATGTTGGCAAGAAGACTCCAGCAAACTAT GATAACCAGTTGGAGAAGTTGCAAGTAGAGCAAATTAGATTGGTAGGTGTGGAACGTGCT CTAAGGAAGGAGGTGGACTCTTTTCGGATCCAGATTGATTCTCTACGACATGAAAATATT AGCTTGTTGAATCGTTTAAGAGGCAACGGAAAGGAGGGTGGGTTTTCAACTTTTAGGCTA GATCAGGAATTATGCAATCGTGTATGCTGCTTGCAAAATCAGGGGCTTAATATGCTGAGG GAGAGCAGCCAGCTTTGTGGAAAGCTATTAGAGTACACAAAAGAAAATGTGAGACAAAAT GGGGGAATTGATGGTCAATTCTTAATTGAATGCAATGTAAAGATCCAGGGTTTTAAGAGG GGAATTGAAACTCTGACAAGCAGCTTGCAGACGGTGTCATCTGTGATAAATGAGAAGTCC CACCCAGTAAATTCAGATTCTCAGCCATCTAGCAAGGGTGATGCATTTCACCAGCAAAAC AGTCAGAAACCAGATGAAATTAAGCAATCAGAGCTCAAATCGGAGACTTTGCTGACAGCT GTGTTGAGGGAGAAGCTTTATTCCAAGGAGATGGATATAGAGCAACTTCAGGCTGATCTG GCAGCAGCAGTCAGAGGTAACGATATCCTCAAATGTGAAGTTCAAAATGCGCTGGACACT CTTTCTTGTGCCAAACACAAGTTGAAAGATCTCGAGCTTCAGATGATAAAAAAGGACGAA AATATCAACCAGCTCCAGAATGATTTGCAAGAATGCATGAAGGAACTTAGCCTCATGAAG GGGATACTACCAAAAGTATCTCAGGAAAGAGATTACATGTGGGAGGAAGTTAAGAACTAC AGTGAGAAGAACATGTTGTTGAACTCTGAGGTCAACACGTTGAAAAAGAAGGTAGAGACG CTCGATGAAGACATACTTATGAAAGAAGGTCAAATCACAATCTTGAAGGACAGCTTAGGC AAACCTTTCGATCTTCTTTCAAGTCCTGATTCTACTAGAGAATTCCTGTTGGAGTGATCG ATCCCCCCAAAGTATAGCATTTTGTTTATTTGACTAGTGTTCATACTTACTTCTTGTATA CTTGCTGGTTTTACTCTTTCTCCTTTGCCTTTTACTTTGATACTTGTTACATAGAAAGTT TGCTCACCCCCCACCCCCACCCCACCCCGACGAATCTCCAATTCAATTTGTAAACACTTC TTTTACTTGTGAATTGTGATCAAGACAATGAACTTCCCTTGCCTCATTTGTTTTTTTGTA CAGTATTTGGCTGCTTTTTCCTGGAGATGTATTTGATTTATTATTACAGGTGATATTCTA CTTGTGTTGGGGTTTTCCAGATACTAAATTGGAGATAGTGTACAACAACAATCCTAGATA GATACAGCTCATTAAACATACAAATTAACTTCTCATTGATGTATTCTTTCACTAAGGTTG AGTTTAAACCTTATGTTAATTTTTTTTTTGTTCCTAAATGGATTTGAAAGAAAGAAAAAG TTCCATATATTTGACGTGAAGGGGAAACTATTCATATTTGCTCATGTCCAAGGTTTCTCA AATGTCTAGATATACCTTTTGTTCACCA