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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g054840.3.1
CDS Infomation

E3 UFM1-protein ligase (AHRD V3.3 *-* A0A199V584_ANACO)
Sequence

ATGGTGCGCATACATGTGAAGCACGGCGGCGGCAGCGACGGCGACGGCGAGTTTCTCTAC
GACACTGAAACGTCTTCAACAATTGATGAAATCGCCAAAGACATAATCGAAATAGCGAAT
CTCCAATCGAAGATTCAATGCTTCGCTGTCGAATTCGAGTCTCATCTCTCTAAGCTTCAA
GGCGATCCTAAAGTTATGTCTCTGGTGAGAGCTCTCTCCGAAGCTACGTCGTATGCTTCA
AAGGATCAGGTTATACATAACAAACCTCTATCACTTTATGTGCTAAGAAATCACACAAGA
AACATTGAGAAGGAATATTTGGTAACGCATTCAGTAATGGGATTATCAAGTTCCAATTTA
CAACAATTCTTGTCAGACTTGCAAATTCTTGAAGAAAACACAGTGCAACTTTTATGGGCA
GGAAAAGAGCTCACCAGAGGGAAAAAATTGTGTGACTTTATAGGAAGAAATGAGAAGACA
AAGATCGTTATAAGGTTGCAGTCACCTATTCCACCTCCTGCATCACTCACTGGTGGAGAA
AAATGTTGA

Peptide Sequence

PEP ID

Solyc05g054840.3.1
PEP Infomation

E3 UFM1-protein ligase (AHRD V3.3 *-* A0A199V584_ANACO)
Sequence

MVRIHVKHGGGSDGDGEFLYDTETSSTIDEIAKDIIEIANLQSKIQCFAVEFESHLSKLQ
GDPKVMSLVRALSEATSYASKDQVIHNKPLSLYVLRNHTRNIEKEYLVTHSVMGLSSSNL
QQFLSDLQILEENTVQLLWAGKELTRGKKLCDFIGRNEKTKIVIRLQSPIPPPASLTGGE
KC*

Transcript Sequence

Transcript ID

Solyc05g054840.3.1
Transcript Infomation

E3 UFM1-protein ligase (AHRD V3.3 *-* A0A199V584_ANACO)
Sequence

ATTCGTTACTGTGTCGAAATAGAAACGTGTCGGATTTTTACCGGAAAAAGTGTGTTAGTA
TAAATAGAGAAATAGATAGTCCAAAAAATTTGCAAATGTAAAGCAAATTCAAAAGGAAAA
AATTGAGCATAAAGAGTTCACTTGCTAAGGCTTCGAAGATGGTGCGCATACATGTGAAGC
ACGGCGGCGGCAGCGACGGCGACGGCGAGTTTCTCTACGACACTGAAACGTCTTCAACAA
TTGATGAAATCGCCAAAGACATAATCGAAATAGCGAATCTCCAATCGAAGATTCAATGCT
TCGCTGTCGAATTCGAGTCTCATCTCTCTAAGCTTCAAGGCGATCCTAAAGTTATGTCTC
TGGTGAGAGCTCTCTCCGAAGCTACGTCGTATGCTTCAAAGGATCAGGTTATACATAACA
AACCTCTATCACTTTATGTGCTAAGAAATCACACAAGAAACATTGAGAAGGAATATTTGG
TAACGCATTCAGTAATGGGATTATCAAGTTCCAATTTACAACAATTCTTGTCAGACTTGC
AAATTCTTGAAGAAAACACAGTGCAACTTTTATGGGCAGGAAAAGAGCTCACCAGAGGGA
AAAAATTGTGTGACTTTATAGGAAGAAATGAGAAGACAAAGATCGTTATAAGGTTGCAGT
CACCTATTCCACCTCCTGCATCACTCACTGGTGGAGAAAAATGTTGAAAGAAACTGACGT
CGTCTGGTTTTTGAACGACTTTTAAATGGGAAACACACTCCTTTTGAATGATCTTCTTGT
ATAATCCCATAAAGTAGGGTTTGGAGAGGGTAGGAATTACTGTTGAATGAAAACTATTTA
TGTAGACCTTGCATCTCAACTACCACTAGTATCCCGAGGATTCTAAACCTTAATTCACTA
CAAGTCAAACTCGGTGAATCTAGTCATTAAATCATCTATGTAAATGTGTACCCGAATTCA
TATTGCTTTTGGAGTTTCTATAGGTGTTATATTTCTACTAGATATGTCTGATTCCTTATC
ATTATGCTGTTGTAGTTTATGCTCATAATCTTGCCTAGTTTGAAGTACATGTTATGAGAA
GTGCAATGCATATGATTTGAGCTTGTAGTTCTTCTTTCAATTGTTTGGGACTGAATCGTA
ATAGTTGTAGTTATTCTTTTGATTCATTTAATGGTCCTACTTCTTGGACAAACAAAGAAT
AGTATAGATGTGTGGATCAATAAACTGTACTAATGCGTGATGAACTAGAAAGGACCGACA
TGAGTGAAATAATATCGTAGCAATGCTTTGATATTCTCCGGAGCCATGAACCAAAAATAA
TGTTTTGATTTTTCACAAAAATACCTTAATAGGC