Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g054730.3.1
CDS Infomation

Cation efflux family protein (AHRD V3.3 *** AT2G39450.1)
Sequence

ATGTTGGAATTAGTGCCTCCCGACGGCGATCACGGCGGAGAATGCGGCGGCGAAGAGCAA
CTGTTGTTGATGGAGACGAACAATGTCGACCGGTCATGGAGGTTGAACTTCGATGAACTA
CGGTTATCGTCTGAGAATAAAGAGAAACCTCTTCCTCATGGATTACATGATTGTCTCGGT
GTATTGTGTCAAGAAGACAACATTGCCGTGTACTACCAGCAACAGGTGGAAATGCTCGAG
GGCTTCAATGAAATGGATGCCTTGGCTGATCGTGGTTTTGTACCTGGGATGTCAAAGGAA
GAGAGGGAAAAATTGGCCAGAAGTGAAACAACTGCCATTAGGATATCAAATATTGCAAAC
ATGGTTCTCTTTGCCGCTAAAGTATATGCATCTGTCAAGAGTGGTTCATTGGCCATCATA
GCATCCACGTTGGATTCACTGCTTGATCTTCTCTCTGGTTTCATTTTATGGTTTACAGCT
TTCTCTATGCAGACACCAAACCCGTATCAATATCCTATCGGGAAGAAACGTATGCAGCCT
TTGGGAATCCTTGTATTTGCTTCTGTCATGGCGACTTTGGGACTGCAGATAATTCTGGAG
TCTATGCGTACACTAATATCCGATGAGTCTAATTTCAGCCTTACCAAGGAGCAAGAGAGA
TGGGTTATTGGGATTATGGTTTTTGTGACTTTAGTGAAACTAGTTTTGGTGTTGTATTGC
CGGTCTTTCACCAATGAGATTGTTAAAGCATATGCCCAGGATCATTTCTTCGATGTTATC
ACAAACGTTATTGGACTAGTCGCGGCATTGCTTGCTAACTACTTCAGTGGCTGGATAGAC
CCTGTTGGAGCTATGATTCTCGCGTTGTATACCATTCGAACATGGTCAATGACCGTGTTA
GAGAACGTGAACTCTCTTGTCGGTAAGGCAGCTGCACCAGAATATCTGCAGAAGCTGACT
TACCTCTGCTGGAACCATCACAAAGCCATAAAGCATATAGATACAGTGAGAGCCTATACA
TTTGGTTCTCATTACTTTGTCGAAGTTGATATCGTCCTACCTGCAGACATGCCCTTACAA
GAGGCACATGATATCGGTGAGTCATTGCAGGAGAAGCTCGAATTATTGCCAGAGATCGAA
CGTGCCTTTGTTCATCTCGACTATGAATACAGCCATAAACCTGAACATGCACAAGCATAC
CTATAA

Peptide Sequence

PEP ID

Solyc05g054730.3.1
PEP Infomation

Cation efflux family protein (AHRD V3.3 *** AT2G39450.1)
Sequence

MLELVPPDGDHGGECGGEEQLLLMETNNVDRSWRLNFDELRLSSENKEKPLPHGLHDCLG
VLCQEDNIAVYYQQQVEMLEGFNEMDALADRGFVPGMSKEEREKLARSETTAIRISNIAN
MVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQP
LGILVFASVMATLGLQIILESMRTLISDESNFSLTKEQERWVIGIMVFVTLVKLVLVLYC
RSFTNEIVKAYAQDHFFDVITNVIGLVAALLANYFSGWIDPVGAMILALYTIRTWSMTVL
ENVNSLVGKAAAPEYLQKLTYLCWNHHKAIKHIDTVRAYTFGSHYFVEVDIVLPADMPLQ
EAHDIGESLQEKLELLPEIERAFVHLDYEYSHKPEHAQAYL*

Transcript Sequence

Transcript ID

Solyc05g054730.3.1
Transcript Infomation

Cation efflux family protein (AHRD V3.3 *** AT2G39450.1)
Sequence

AATTTACTGTGTTCTGCCATTGCTTACATATAGTATTCATTACAAGTTGGCCAGTGTTTT
TCTTTTTCATTTTTCACGGGAAAAATGTTGGAATTAGTGCCTCCCGACGGCGATCACGGC
GGAGAATGCGGCGGCGAAGAGCAACTGTTGTTGATGGAGACGAACAATGTCGACCGGTCA
TGGAGGTTGAACTTCGATGAACTACGGTTATCGTCTGAGAATAAAGAGAAACCTCTTCCT
CATGGATTACATGATTGTCTCGGTGTATTGTGTCAAGAAGACAACATTGCCGTGTACTAC
CAGCAACAGGTGGAAATGCTCGAGGGCTTCAATGAAATGGATGCCTTGGCTGATCGTGGT
TTTGTACCTGGGATGTCAAAGGAAGAGAGGGAAAAATTGGCCAGAAGTGAAACAACTGCC
ATTAGGATATCAAATATTGCAAACATGGTTCTCTTTGCCGCTAAAGTATATGCATCTGTC
AAGAGTGGTTCATTGGCCATCATAGCATCCACGTTGGATTCACTGCTTGATCTTCTCTCT
GGTTTCATTTTATGGTTTACAGCTTTCTCTATGCAGACACCAAACCCGTATCAATATCCT
ATCGGGAAGAAACGTATGCAGCCTTTGGGAATCCTTGTATTTGCTTCTGTCATGGCGACT
TTGGGACTGCAGATAATTCTGGAGTCTATGCGTACACTAATATCCGATGAGTCTAATTTC
AGCCTTACCAAGGAGCAAGAGAGATGGGTTATTGGGATTATGGTTTTTGTGACTTTAGTG
AAACTAGTTTTGGTGTTGTATTGCCGGTCTTTCACCAATGAGATTGTTAAAGCATATGCC
CAGGATCATTTCTTCGATGTTATCACAAACGTTATTGGACTAGTCGCGGCATTGCTTGCT
AACTACTTCAGTGGCTGGATAGACCCTGTTGGAGCTATGATTCTCGCGTTGTATACCATT
CGAACATGGTCAATGACCGTGTTAGAGAACGTGAACTCTCTTGTCGGTAAGGCAGCTGCA
CCAGAATATCTGCAGAAGCTGACTTACCTCTGCTGGAACCATCACAAAGCCATAAAGCAT
ATAGATACAGTGAGAGCCTATACATTTGGTTCTCATTACTTTGTCGAAGTTGATATCGTC
CTACCTGCAGACATGCCCTTACAAGAGGCACATGATATCGGTGAGTCATTGCAGGAGAAG
CTCGAATTATTGCCAGAGATCGAACGTGCCTTTGTTCATCTCGACTATGAATACAGCCAT
AAACCTGAACATGCACAAGCATACCTATAATCAAATGGATATTGGTAACATCTTCTCTAC
CTAATATTATATACCACAAGTTAACTTTGTAATGCTGTCAATCTGGTAATTGCTCTTAAA
AGAAAAGCTACTATTATCTGGTAGAACAGGGATTGCTTTATTCATATATATAATATATAT
TTGCCATGATTCCTCAGTTTGCTAGCTCCTGATATATCTTAATAATATAAACTCGAATTA
ATCGAATCAATAAATTTTGAATACCGACAAAGAAAGAATTGTATGACAGTGGAGGAATTT
TCCAAGACAGGCCCACTGATAACTATATTCTTTCCCAGTCACAC