Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g054620.3.1
CDS Infomation

ACT domain-containing protein (AHRD V3.3 *** AT2G39570.1)
Sequence

ATGGGGATTGCATGGGACGATGTCGTTTTGATTGAACACAGAGGGAAAACCGGTGAGCCG
ACTTCTATCACCGTGAATTGCCCTGATAAAGCTGGGCTTGGATGTGACCTTTGCCGGATT
GTTCTGGAATTCGGACTCTATGTTACTCGTGGAGATTTTGCCACCGATGGGAAATGGTGT
TACATAGTACTGTGGGTTGTGCCACGTCCAAGCTCGCTAAAGGTGGATTGGGGAAGCTTG
AAAAATAGGCTTATGTCTACATGTCCCTCATGCATGATTTCATTTTACCTAAACCAACAG
TCCACTGCTTCTGCACCACCTCCAGTTTACCTATTGAAGGTGTTTTGCCTAGACAGGAAA
GGATTGCTACATGATGTTACTAAGGTCCTTTGCGAGCTTGAGCTAACAATTCAAAGAGTG
AAAGTCACGACAACACCAGACGACAAAGTTTTGGATCTCTTCTTCATAACTGATTGCATG
GACTTGCTGCACACAAAACAAAGACGAGATGAGACATGTGAACATCTAAGTAATGTTCTG
GGAGAATATTGCATTAGCTGTGAGCTTCAGTTGTCGGGGCCTGAATGTGAAGTTCAGCAA
GGATTCGCTTCTCTTCCACAAGAAGTTGCAGAAGAGTTGTTTAGTTGTGAATTGTCTAAG
GAAGCAGTTCCCATGTCCTCTGCATCTGATACGGCAAAATTAAAGAAGGCAACCATCACA
GTGGATAACTTATTGAGCCCAGTTCACACGTTGCTTCAAATACAATGCGTTGATCAAAAG
GCCCTCATCTATGACATTTTGAGAACTTCAAAGGACTGTGATATTCAGGTAACCATATAT
TTTACCAACTGTGTAGTGAATGCCTTTTCTCTGGAATCGAATTTGTGTTTCCAGATTGCT
TTTGGAAGAATCCAGTCTACTGCCAAGGGTTATCGTACTATAGACCTATTTATCCAGACA
ACAGATGGGAAAAAGATTATCGATGATGAGAACATAAAATCTTTGTGTTCCCGCTTGAAG
GAAGAGATGCTTCATCCACTTCGAGTCACTGTTGGCAGTCGTGGCCCAGATACAGAACTA
CTGGTTGCCAACCCCGTTGAGTTATGCGGAAAGGGAAGGCCACGTGTTTTCTATGATGTC
ACAATTGCCTTAAAAGAGCTCGGGATCTGTGTTTTCTCTGCTGAAATTGCAAGACATTCA
ACAGCAGAGAGGCAATGGGAAGTTTATAGGTTCCGATTGGATGAAAGCCCCGCGTACCCA
TTAGCTAGCAAGAAAGCTCGGACTGATATCCTGGATAGAGTGAAAAAAACACTAATGGGC
TGGTGA

Peptide Sequence

PEP ID

Solyc05g054620.3.1
PEP Infomation

ACT domain-containing protein (AHRD V3.3 *** AT2G39570.1)
Sequence

MGIAWDDVVLIEHRGKTGEPTSITVNCPDKAGLGCDLCRIVLEFGLYVTRGDFATDGKWC
YIVLWVVPRPSSLKVDWGSLKNRLMSTCPSCMISFYLNQQSTASAPPPVYLLKVFCLDRK
GLLHDVTKVLCELELTIQRVKVTTTPDDKVLDLFFITDCMDLLHTKQRRDETCEHLSNVL
GEYCISCELQLSGPECEVQQGFASLPQEVAEELFSCELSKEAVPMSSASDTAKLKKATIT
VDNLLSPVHTLLQIQCVDQKALIYDILRTSKDCDIQVTIYFTNCVVNAFSLESNLCFQIA
FGRIQSTAKGYRTIDLFIQTTDGKKIIDDENIKSLCSRLKEEMLHPLRVTVGSRGPDTEL
LVANPVELCGKGRPRVFYDVTIALKELGICVFSAEIARHSTAERQWEVYRFRLDESPAYP
LASKKARTDILDRVKKTLMGW*

Transcript Sequence

Transcript ID

Solyc05g054620.3.1
Transcript Infomation

ACT domain-containing protein (AHRD V3.3 *** AT2G39570.1)
Sequence

CATATAATAGAATCTTTCGATATTACTGAGATTGTTCGGCCCAATACAAATACTAAACAC
ACACGAGTATTCTATTATTGGTAATGAAAAATGTTAAACCATATTACCACAAGCAAAATC
TGATACGTATAATAAACTATTCCATTTTATAGAGATTATTTGGACCTAACATGTAGACCT
TACACACACAAGTATTTTTTTTTACTAATAGTTGAAATTGTCAAATTATATCAACATATT
GCGAAATTAAACATGATATGTACATTAAAATATTTATTTAGATCCAATATAAATATTACA
GACACACGAATATTTTATTTCTAGTATCGAAAAATGTCACACCACATCAACAATTGCAAA
GCAAAATATTATACGTACAATAATATTCAATTCTATCAAGAATATTCATATTTAGTACAA
ATATCAAATACACACAAATATTTTAGTACTAGTGGTAAAATATACCAAAAATTATATCAA
CATGAGCGAAGCAAAACGTTATATATACAATAGATCATTAATATTTAGACCCATACAATA
TCCATCTCACACAAATATTTTATTACTAGTAGCAGAAAATTCCAAACCACATCTGACTTG
GTAATGATGTGTCTATGGATCCCATTTTTAGACAAAACAATTTTATTGAAGTAGAAATAT
TGTTTTCAAATTAGTTTAGCTTCTAAAATTAGTCAAATTAACACTTGCAAAGTAAAATAT
AATTCCTATAATAAAATATTTCGATATTATTGAGATTATTCCGTTCAATACAAACATTAA
CACACACGAATATTTTATCGTTAGTAATGAAAAATGTCAAATCATATCAACACAGGAAAT
TCATGATACATACAATAAAATATTTGATACTATCGAAATTATTAGGACCTAATGCAAATA
CAAGAGATATACGAGTATTCTTGCTAGTTGTGAAAAATGCCGAACTACATCAACATATGT
GAAGCATGACGTGATATGTACAATAGACCATTTTATTTGAATTCCAATAAAAATATCGAA
GATACACGAGTAATTTTATTGCCAGTAATAAAAATGTGAAATCACATCAAACACATGTGG
AACAAAACATGATACATACGATACAATACTTAATACTATTTAGAATATTCAGTCCCAATA
CAAATACAAAATACGCATATTTTATTGCCAGTAGTGAAAAAAAATCAAACAACATCACAG
ATACAAAGTAAACGATACGTATAATGAAATCTTTCGATATTTTTAAAATTATTCTGAAAC
AATACAAATACCAAACACGCACAAAGTATTTTATTGCTAGTAATAAAAAATGTCCAATCA
CATCAACACTTGAAGAAAAACGTGATACGTATAATTGTTCATTCAATATTATCGAAATTA
TTCGAACACAATATAAATATCGAACACACACGAGTATTTTATTGCTAGTAACGAAAAACG
CCAAATCATATCTGACATGGTAATGATGTGTCAATGGGTCCCATTTTCTAACCAAACAAC
TTCTTCTTCAACAATTATTATCACTGAAAAAATATAAATAAAAAAACCATTGATTTGTTG
CAGAACAGGGTGCGGCGATTTTGTCTTTAAAGCCTCACAAATTTCATATATATATTTATG
TATTCGGCCGGATAAGTCTCTCAGATTCAGACGCCGGTCATCGGTAAGTTCTTCCCGGAG
AATTTCTGATATATAGCCGCCGGTGCCGGTGAATTTGAACAAAAAATGGGGATTGCATGG
GACGATGTCGTTTTGATTGAACACAGAGGGAAAACCGGTGAGCCGACTTCTATCACCGTG
AATTGCCCTGATAAAGCTGGGCTTGGATGTGACCTTTGCCGGATTGTTCTGGAATTCGGA
CTCTATGTTACTCGTGGAGATTTTGCCACCGATGGGAAATGGTGTTACATAGTACTGTGG
GTTGTGCCACGTCCAAGCTCGCTAAAGGTGGATTGGGGAAGCTTGAAAAATAGGCTTATG
TCTACATGTCCCTCATGCATGATTTCATTTTACCTAAACCAACAGTCCACTGCTTCTGCA
CCACCTCCAGTTTACCTATTGAAGGTGTTTTGCCTAGACAGGAAAGGATTGCTACATGAT
GTTACTAAGGTCCTTTGCGAGCTTGAGCTAACAATTCAAAGAGTGAAAGTCACGACAACA
CCAGACGACAAAGTTTTGGATCTCTTCTTCATAACTGATTGCATGGACTTGCTGCACACA
AAACAAAGACGAGATGAGACATGTGAACATCTAAGTAATGTTCTGGGAGAATATTGCATT
AGCTGTGAGCTTCAGTTGTCGGGGCCTGAATGTGAAGTTCAGCAAGGATTCGCTTCTCTT
CCACAAGAAGTTGCAGAAGAGTTGTTTAGTTGTGAATTGTCTAAGGAAGCAGTTCCCATG
TCCTCTGCATCTGATACGGCAAAATTAAAGAAGGCAACCATCACAGTGGATAACTTATTG
AGCCCAGTTCACACGTTGCTTCAAATACAATGCGTTGATCAAAAGGCCCTCATCTATGAC
ATTTTGAGAACTTCAAAGGACTGTGATATTCAGGTAACCATATATTTTACCAACTGTGTA
GTGAATGCCTTTTCTCTGGAATCGAATTTGTGTTTCCAGATTGCTTTTGGAAGAATCCAG
TCTACTGCCAAGGGTTATCGTACTATAGACCTATTTATCCAGACAACAGATGGGAAAAAG
ATTATCGATGATGAGAACATAAAATCTTTGTGTTCCCGCTTGAAGGAAGAGATGCTTCAT
CCACTTCGAGTCACTGTTGGCAGTCGTGGCCCAGATACAGAACTACTGGTTGCCAACCCC
GTTGAGTTATGCGGAAAGGGAAGGCCACGTGTTTTCTATGATGTCACAATTGCCTTAAAA
GAGCTCGGGATCTGTGTTTTCTCTGCTGAAATTGCAAGACATTCAACAGCAGAGAGGCAA
TGGGAAGTTTATAGGTTCCGATTGGATGAAAGCCCCGCGTACCCATTAGCTAGCAAGAAA
GCTCGGACTGATATCCTGGATAGAGTGAAAAAAACACTAATGGGCTGGTGA