Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g054600.3.1
CDS Infomation

Methionyl-tRNA synthetase family protein (AHRD V3.3 *** B9HTK5_POPTR)
Sequence

ATGGCATGTAGAGTTCAACATTCAATTCAGAGCAGTTTTTGGTTCTTATCGTCAACCCCT
TTTCGAAATACTTTGAACCCAAGAAAGAATTTTTTCAAGAATCGAATTAGTTTTGGCAAA
GAATTGTTTTTTTCATCTTCTTCAAGAACTGCCCTTTACTGCACTTGCAGTAGTAGTAGT
AGTGGTGGTGGTGATAAAGATGTTTTTTTGACAAATGGGGTTGGGGGTGATGATTCATTT
GTACTTACAACTCCACTTTATTATGTTAATGCTCCTCCTCATATGGGGAGTGCGTACACT
ACCATTGCTGCTGATGCCATTGCTCGTTTTCAGAGGCTACTTGAGAAGAAAGTTATATTC
ATCACTGGCACAGATGAACATGGAGAGAAGATTGCTACTGCAGCTGCAGCTAATGGTTCT
AGCCCAAATGAACACTGTGACGTTGTATCACAAGCTTATAAAGCTCTCTGGAAAGATTTA
GACATAAGTTATGACAAGTTTATCAGAACAACTGATCCAAAGCATGAAGCTGTTGTGAAG
GAATTTTACTCTCGGGTTCTTGCAAATGGTGACATATACAGGGCTGATTATGAGGGACTT
TATTGTGTCAACTGTGAGGAGTACAAGGACGAGAAGGATTTGCTGGATGATAACTGTTGT
CCTACGCACTTAAAGCCATGTGTGAAAAGAAAAGAAGATAATTACTTCTTTGCATTGTCA
AAGTATCAACAACAATTGGAAGAAGTTTTAAAGCAAAACTCTGGTTTCGTCCAGCCTTCT
TATCGTCTAAATGAGGTTCAAGGTTGGATTAAAAATGGCCTGAAAGATTTCTCCATTTCC
CGAGCATCAGTAGATTGGGGTATTGCTGTTCCTAATGATTCAAAGCAGACTATATATGTC
TGGTTTGATGCTTTATTGGGTTATGTATCTGCACTTCTGGAGGATAGCGAGCTAGCCAGT
TTAGATACTGCAATTTCTTCTGGATGGCCTGCCTCGCTCCACTTAATTGGCAAGGATATA
TTGCGATTTCACGCTGTTTATTGGCCAGCAATGTTAATGTCAGCAGGAATTGGTCTCCCT
AAGATGGTATTTGGTCATGGATTCTTGACCAAGGATGGTATGAAGATGGGTAAATCACTG
GGGAATACACTCGAGCCAACAGACTTGGTTCAGAGGTTTGGACCTGATGCAGTCAGGTAC
TTTTTCCTCAGGGAGGTAGAATTTGGTAATGACGGGGACTACTCAGAGGAACGGTTCATC
AGAATGATAAACGCAAATTTAGCTAATACAATTGGTAATCTTCTAAATCGCACACTTGGA
CTTCTGAAAAAAAACTGCCAATCAACTCTGGCGGTTGATTCAGATGTTGCGGCAGAAGGA
AACGAATTCAAGGCTGCAGTGGAGAAACTGGTAGAGAAAGCACGAGTGCACTATCAAAAT
TTGGAATTATCAGCAGCTTGCGAGACTGTGCTGGAGATTGGTAATGCTGGAAATTTATAC
ATTGATGGACAAGCACCGTGGACTCTTTTCAAGCAAGGCGGCACAGCTTTTGAAACTGCA
GCAAAGGATCTCGTAGTTGTATTAGAAGCAATGAGAATCATATCAATCGCGCTATCACCA
ATTACACCAGGCTTGAGCTTGAGGATATATTCCCAACTTGGCTACTCCAAGGAACAATTC
AATGCTGTTAGCTGGAGTGATACCAAATGGGGCGGGCTGAAAGCTGGTCAAGTAATGGCA
CAGGCAACGCCAATCTTTGCCAGAATAGAAGATGGAACTGAAGCTGAGACCAAAAGTGCA
GCAACAAAGAAAGTTAAGAAGGAGAAGACACCTAAAAGTAAGAGTCCTGTTGAAGCTTAG

Peptide Sequence

PEP ID

Solyc05g054600.3.1
PEP Infomation

Methionyl-tRNA synthetase family protein (AHRD V3.3 *** B9HTK5_POPTR)
Sequence

MACRVQHSIQSSFWFLSSTPFRNTLNPRKNFFKNRISFGKELFFSSSSRTALYCTCSSSS
SGGGDKDVFLTNGVGGDDSFVLTTPLYYVNAPPHMGSAYTTIAADAIARFQRLLEKKVIF
ITGTDEHGEKIATAAAANGSSPNEHCDVVSQAYKALWKDLDISYDKFIRTTDPKHEAVVK
EFYSRVLANGDIYRADYEGLYCVNCEEYKDEKDLLDDNCCPTHLKPCVKRKEDNYFFALS
KYQQQLEEVLKQNSGFVQPSYRLNEVQGWIKNGLKDFSISRASVDWGIAVPNDSKQTIYV
WFDALLGYVSALLEDSELASLDTAISSGWPASLHLIGKDILRFHAVYWPAMLMSAGIGLP
KMVFGHGFLTKDGMKMGKSLGNTLEPTDLVQRFGPDAVRYFFLREVEFGNDGDYSEERFI
RMINANLANTIGNLLNRTLGLLKKNCQSTLAVDSDVAAEGNEFKAAVEKLVEKARVHYQN
LELSAACETVLEIGNAGNLYIDGQAPWTLFKQGGTAFETAAKDLVVVLEAMRIISIALSP
ITPGLSLRIYSQLGYSKEQFNAVSWSDTKWGGLKAGQVMAQATPIFARIEDGTEAETKSA
ATKKVKKEKTPKSKSPVEA*

Transcript Sequence

Transcript ID

Solyc05g054600.3.1
Transcript Infomation

Methionyl-tRNA synthetase family protein (AHRD V3.3 *** B9HTK5_POPTR)
Sequence

CCACATAAATAATAACTATCAACATTTTATAAAAAAAAAATGTCAAACTAACTTTTTAAC
AATTGGTAATTAGATTCACTAATATTTATTCTCCATTAAAAAAAATAATAATTATAGGAG
TGTGAAGTCCATCCCTAATCTTTAAGCTTTGGTTCGTCTTCTTCCTTTTCACTTTTCTGC
AAATTTTTTTTTTGAGCTCAAACCAAATTTCTTCATTATTCACAGCTTATTGAAGCCAAA
TTCAAGAACCCCAGTAGCACAAAATCCATTTTTTTTCACTCACAGTTAGTCAAATTCAAG
GAAAAAAATGGCATGTAGAGTTCAACATTCAATTCAGAGCAGTTTTTGGTTCTTATCGTC
AACCCCTTTTCGAAATACTTTGAACCCAAGAAAGAATTTTTTCAAGAATCGAATTAGTTT
TGGCAAAGAATTGTTTTTTTCATCTTCTTCAAGAACTGCCCTTTACTGCACTTGCAGTAG
TAGTAGTAGTGGTGGTGGTGATAAAGATGTTTTTTTGACAAATGGGGTTGGGGGTGATGA
TTCATTTGTACTTACAACTCCACTTTATTATGTTAATGCTCCTCCTCATATGGGGAGTGC
GTACACTACCATTGCTGCTGATGCCATTGCTCGTTTTCAGAGGCTACTTGAGAAGAAAGT
TATATTCATCACTGGCACAGATGAACATGGAGAGAAGATTGCTACTGCAGCTGCAGCTAA
TGGTTCTAGCCCAAATGAACACTGTGACGTTGTATCACAAGCTTATAAAGCTCTCTGGAA
AGATTTAGACATAAGTTATGACAAGTTTATCAGAACAACTGATCCAAAGCATGAAGCTGT
TGTGAAGGAATTTTACTCTCGGGTTCTTGCAAATGGTGACATATACAGGGCTGATTATGA
GGGACTTTATTGTGTCAACTGTGAGGAGTACAAGGACGAGAAGGATTTGCTGGATGATAA
CTGTTGTCCTACGCACTTAAAGCCATGTGTGAAAAGAAAAGAAGATAATTACTTCTTTGC
ATTGTCAAAGTATCAACAACAATTGGAAGAAGTTTTAAAGCAAAACTCTGGTTTCGTCCA
GCCTTCTTATCGTCTAAATGAGGTTCAAGGTTGGATTAAAAATGGCCTGAAAGATTTCTC
CATTTCCCGAGCATCAGTAGATTGGGGTATTGCTGTTCCTAATGATTCAAAGCAGACTAT
ATATGTCTGGTTTGATGCTTTATTGGGTTATGTATCTGCACTTCTGGAGGATAGCGAGCT
AGCCAGTTTAGATACTGCAATTTCTTCTGGATGGCCTGCCTCGCTCCACTTAATTGGCAA
GGATATATTGCGATTTCACGCTGTTTATTGGCCAGCAATGTTAATGTCAGCAGGAATTGG
TCTCCCTAAGATGGTATTTGGTCATGGATTCTTGACCAAGGATGGTATGAAGATGGGTAA
ATCACTGGGGAATACACTCGAGCCAACAGACTTGGTTCAGAGGTTTGGACCTGATGCAGT
CAGGTACTTTTTCCTCAGGGAGGTAGAATTTGGTAATGACGGGGACTACTCAGAGGAACG
GTTCATCAGAATGATAAACGCAAATTTAGCTAATACAATTGGTAATCTTCTAAATCGCAC
ACTTGGACTTCTGAAAAAAAACTGCCAATCAACTCTGGCGGTTGATTCAGATGTTGCGGC
AGAAGGAAACGAATTCAAGGCTGCAGTGGAGAAACTGGTAGAGAAAGCACGAGTGCACTA
TCAAAATTTGGAATTATCAGCAGCTTGCGAGACTGTGCTGGAGATTGGTAATGCTGGAAA
TTTATACATTGATGGACAAGCACCGTGGACTCTTTTCAAGCAAGGCGGCACAGCTTTTGA
AACTGCAGCAAAGGATCTCGTAGTTGTATTAGAAGCAATGAGAATCATATCAATCGCGCT
ATCACCAATTACACCAGGCTTGAGCTTGAGGATATATTCCCAACTTGGCTACTCCAAGGA
ACAATTCAATGCTGTTAGCTGGAGTGATACCAAATGGGGCGGGCTGAAAGCTGGTCAAGT
AATGGCACAGGCAACGCCAATCTTTGCCAGAATAGAAGATGGAACTGAAGCTGAGACCAA
AAGTGCAGCAACAAAGAAAGTTAAGAAGGAGAAGACACCTAAAAGTAAGAGTCCTGTTGA
AGCTTAGAACTTTTTTTCATGCTTATCTTAAACATCATTGTTTTCTCCTCCCGCGATATG
TAAAACATCGATTCTTACAACCAATAAGTATCTATCGATATTGCTTTGCATAGATTTTGT
TTTAACCTTCTGTGTTATCAGTCATAACTTAGAGCTGGATACATCAAAGAACTATCAGTT
TTTTCGACCAGTTTTCTACATTCTATCTTGCCATTTTGCTGTTCCATCGATAAGTAGCTG
TCAACGTTGTATGTTTCCTTAAGGGAAACAAGTCGTTTTCCAGCAAAACTAGACCACATT
TGGATGGACAACTTTCTTTGTAATACAATTTGATATTGAACATGTACAATTTTTAAGGTT
TTCACAGAAGGAAGGAGGCTATTAAGTCTGTCAAGTGATGATAGTGTTGTGCAAATACAT
AATGAGATTTGCTTGTAAATAAGTTAATGATTTAATATATCTAGCTACTCCTTTGTATA