Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g054493.1.1
CDS Infomation

DNA/RNA-binding protein KIN17 (AHRD V3.3 *** A0A0B2S1P2_GLYSO)
Sequence

ATGGGGAAAAATGATTTCTTGACCCCTAAGGCAATTGCCAACCGAATAAAAGCAAAGGGC
CTGCAGAAGCTGCGATGGTACTGCCAAATGTGCCAAAAGCAATGTCGAGATGAAAATGGA
TTCAAGTGCCACTGCATGAGTGAGTCTCATCAACGTCAAATGGAAATCTTTGGTCAGAAC
CCTAATCGCATTGTCGGTGGCTATTCCGAGGAATTTGAGAGCTTATTTCTTGAGCATATG
AAGCGTAGTCACCGCTTTAGTCGTATTGCTGCAACTGTTGTGTACAATGAGTATATCGCT
GATCGCCACCATGTCCATATGAATTCCACTCAATGGGCAACATTAACTGAGTTTGTGAAG
TACTTGGGAAAAACAGGAAAGTGTAAAGTTGAAGACACACCGAAAGGTTGGTTTATTACC
TATATTGATCGAGACTCCGAGACTCTCTTCAAAGAAAAAATGAAAAACAAAAGAATTAGG
TCCGACCTAGCAGATGAAGAGAAGCAGGAAAGGGAGATTAAGAAGCAAAGAGAGCGTGCT
GAGCAGTTGATGGGTGCAGGAAATATGGATGGTATGGAAAATATGGATGGTTCTGTAGAG
TTGCATCCGGTGCTCATGGAGAAATTGGAGACTGAGCAGAAGATCAAGTTAACGTTAGGC
TCGACATCAAAATCTGTTGTGAAAGAGAGAGCAGGAAGCTCAAAATCCGTGTTTGATGAG
ATAGATAATGAGAAGAGAGAAAAAGGTAAGGACAGTGGTAAGAATGGTAAACGTGAAAAT
TGCCCTGTGTTGGATGAGATAATGAGAGAGGAAGAGGAACAAAAGGAGCGGAGTAATAGG
AAAGATTACTGGTTATGCTCAGGGATAGTTGTGAAGGTAATGAGCAAGGCTTTGGCTGAA
AAGGGTTACTATAAGCAAAAGGGTATTGTTCGCAAGGTTATTGATAAGTATGTTGGGGAG
ATTGAAATGATTGAAACTAAGCATGTTCTACGGGTTGATCAGGAAGAGCTTGAGACTGTC
ATTCCCCAAATTGGTGGTCTTGTGAGGATCGTTAATGGTGCATATCGTTCATCAAATGCT
AGACTATTAGCAGTTGATACAAAGAACTTCAGTGCTAGAGTACAAATTGAGAAGGGAATA
TATGACGGTAAGGTTATCAAGGCCATTGATTACGAAGATATATCAAAAATTGCTGAATGA

Peptide Sequence

PEP ID

Solyc05g054493.1.1
PEP Infomation

DNA/RNA-binding protein KIN17 (AHRD V3.3 *** A0A0B2S1P2_GLYSO)
Sequence

MGKNDFLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKCHCMSESHQRQMEIFGQN
PNRIVGGYSEEFESLFLEHMKRSHRFSRIAATVVYNEYIADRHHVHMNSTQWATLTEFVK
YLGKTGKCKVEDTPKGWFITYIDRDSETLFKEKMKNKRIRSDLADEEKQEREIKKQRERA
EQLMGAGNMDGMENMDGSVELHPVLMEKLETEQKIKLTLGSTSKSVVKERAGSSKSVFDE
IDNEKREKGKDSGKNGKRENCPVLDEIMREEEEQKERSNRKDYWLCSGIVVKVMSKALAE
KGYYKQKGIVRKVIDKYVGEIEMIETKHVLRVDQEELETVIPQIGGLVRIVNGAYRSSNA
RLLAVDTKNFSARVQIEKGIYDGKVIKAIDYEDISKIAE*

Transcript Sequence

Transcript ID

Solyc05g054493.1.1
Transcript Infomation

DNA/RNA-binding protein KIN17 (AHRD V3.3 *** A0A0B2S1P2_GLYSO)
Sequence

ATGGGGAAAAATGATTTCTTGACCCCTAAGGCAATTGCCAACCGAATAAAAGCAAAGGGC
CTGCAGAAGCTGCGATGGTACTGCCAAATGTGCCAAAAGCAATGTCGAGATGAAAATGGA
TTCAAGTGCCACTGCATGAGTGAGTCTCATCAACGTCAAATGGAAATCTTTGGTCAGAAC
CCTAATCGCATTGTCGGTGGCTATTCCGAGGAATTTGAGAGCTTATTTCTTGAGCATATG
AAGCGTAGTCACCGCTTTAGTCGTATTGCTGCAACTGTTGTGTACAATGAGTATATCGCT
GATCGCCACCATGTCCATATGAATTCCACTCAATGGGCAACATTAACTGAGTTTGTGAAG
TACTTGGGAAAAACAGGAAAGTGTAAAGTTGAAGACACACCGAAAGGTTGGTTTATTACC
TATATTGATCGAGACTCCGAGACTCTCTTCAAAGAAAAAATGAAAAACAAAAGAATTAGG
TCCGACCTAGCAGATGAAGAGAAGCAGGAAAGGGAGATTAAGAAGCAAAGAGAGCGTGCT
GAGCAGTTGATGGGTGCAGGAAATATGGATGGTATGGAAAATATGGATGGTTCTGTAGAG
TTGCATCCGGTGCTCATGGAGAAATTGGAGACTGAGCAGAAGATCAAGTTAACGTTAGGC
TCGACATCAAAATCTGTTGTGAAAGAGAGAGCAGGAAGCTCAAAATCCGTGTTTGATGAG
ATAGATAATGAGAAGAGAGAAAAAGGTAAGGACAGTGGTAAGAATGGTAAACGTGAAAAT
TGCCCTGTGTTGGATGAGATAATGAGAGAGGAAGAGGAACAAAAGGAGCGGAGTAATAGG
AAAGATTACTGGTTATGCTCAGGGATAGTTGTGAAGGTAATGAGCAAGGCTTTGGCTGAA
AAGGGTTACTATAAGCAAAAGGGTATTGTTCGCAAGGTTATTGATAAGTATGTTGGGGAG
ATTGAAATGATTGAAACTAAGCATGTTCTACGGGTTGATCAGGAAGAGCTTGAGACTGTC
ATTCCCCAAATTGGTGGTCTTGTGAGGATCGTTAATGGTGCATATCGTTCATCAAATGCT
AGACTATTAGCAGTTGATACAAAGAACTTCAGTGCTAGAGTACAAATTGAGAAGGGAATA
TATGACGGTAAGGTTATCAAGGCCATTGATTACGAAGATATATCAAAAATTGCTGAATGA