Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g054400.3.1
CDS Infomation

GATA transcription factor, putative (AHRD V3.3 *** B9RZK8_RICCO)
Sequence

ATGGTGGATCTAAGTGATAAACAGGGTTTAGGATCTGAAGAAATGAGTAGCGGAGTTACT
TCACCGGAAACTAGCCAAAGTAACGTCAAGACTTGTGCTGATTGCGGTACCACAAAAACA
CCTCTTTGGAGAGGTGGACCTGCTGGTCCCAAGTCACTATGTAATGCTTGTGGGATCAAA
AGTAGGAAAAAGAGGAGAGCCTTTCTCGGGTTGAACAACGAAGAGAAGAAATCAAAGAAA
TCAGTGGTGGTTGGACATAAAAACATTGAAGTACAGCACCATTTGAACCAAAGTTGTAGC
AGCAGCAGCAACAGTGATGATAGTAAAAGCAGTAACTTTGTGAAGAACATTGTTTCTTCT
TCGTTGAAAAAGAAATTACTTCCTTTTGGTAAAGAAGAAGTCGTTATGCAGAGACCAAGA
TCAAGATCTACTCAGAAGAGAAAGCTTGGAGAAGTAGAACAAGCAGCATTCCTGTTGATG
GCTCTTTCTTGTGGCTCTTTTTATACTCATGGAAGGATGAAAATCGACAAGGAAAGAAAG
AACGAGAAATGTTGTACTCTTGGCAGTAAAAGTAGTACTTTGTGGGTCGGTTGA

Peptide Sequence

PEP ID

Solyc05g054400.3.1
PEP Infomation

GATA transcription factor, putative (AHRD V3.3 *** B9RZK8_RICCO)
Sequence

MVDLSDKQGLGSEEMSSGVTSPETSQSNVKTCADCGTTKTPLWRGGPAGPKSLCNACGIK
SRKKRRAFLGLNNEEKKSKKSVVVGHKNIEVQHHLNQSCSSSSNSDDSKSSNFVKNIVSS
SLKKKLLPFGKEEVVMQRPRSRSTQKRKLGEVEQAAFLLMALSCGSFYTHGRMKIDKERK
NEKCCTLGSKSSTLWVG*

Transcript Sequence

Transcript ID

Solyc05g054400.3.1
Transcript Infomation

GATA transcription factor, putative (AHRD V3.3 *** B9RZK8_RICCO)
Sequence

CATATTTTTTCCGCCACTATCACTCTTCTTCTCTTATCTATAAACTAAGCTCAAATTTCT
TCTTCGTTTTTTTGAGTTTTTGAGTGGTGGGGTTTCTTATTGTTGTTCTATCTACTTGAT
AGAGCTCAAAAATCCAGTTTGATTGAGCTTTTTTTGGGTGTTTTTGGTGGGTTATTGAGT
AATTGCTGGTGGAGTTTATACATTGTGATTCTTCTGAAAAAGTGATCGAAAATGGTGGAT
CTAAGTGATAAACAGGGTTTAGGATCTGAAGAAATGAGTAGCGGAGTTACTTCACCGGAA
ACTAGCCAAAGTAACGTCAAGACTTGTGCTGATTGCGGTACCACAAAAACACCTCTTTGG
AGAGGTGGACCTGCTGGTCCCAAGTCACTATGTAATGCTTGTGGGATCAAAAGTAGGAAA
AAGAGGAGAGCCTTTCTCGGGTTGAACAACGAAGAGAAGAAATCAAAGAAATCAGTGGTG
GTTGGACATAAAAACATTGAAGTACAGCACCATTTGAACCAAAGTTGTAGCAGCAGCAGC
AACAGTGATGATAGTAAAAGCAGTAACTTTGTGAAGAACATTGTTTCTTCTTCGTTGAAA
AAGAAATTACTTCCTTTTGGTAAAGAAGAAGTCGTTATGCAGAGACCAAGATCAAGATCT
ACTCAGAAGAGAAAGCTTGGAGAAGTAGAACAAGCAGCATTCCTGTTGATGGCTCTTTCT
TGTGGCTCTTTTTATACTCATGGAAGGATGAAAATCGACAAGGAAAGAAAGAACGAGAAA
TGTTGTACTCTTGGCAGTAAAAGTAGTACTTTGTGGGTCGGTTGAATGTTTCAGCTCGGA
GAAGTTTAGCTTGATTTGAGAAGTGCTAATTCGATTTGGAAGACTATGAGTAGATAGAAA
GTTGAGGAGAGCTCTTATGTTTTCATTTCATTAATTTTATACTACTATTTTAGTTCATTT
ATGAAATTATTTTCTTATCTTGATGATGACTTGATTGATGAAATTATTTCTTAATGTTCA
TTACATGGCAACAACCTTAATATGTTTGATACAAAAAATAGTTTCCCAAAATTAGGATAA
TAGCCATTTTTATCCCTTTTGTTTAGTGGTTAGGACATTGTTTAGCTGAGAATCTATCGA
AAACCTCGTTACGTAAGGTTTGTGCATGTTTAATCATATCATAGTATGTTGCTTTCAATA
GCTTCAAATTAGTTCGTGTCTAACTTCTTTATATTTTGAATCACCTTAATGAAAAATATG
AATTTGTCACTAGTTT