Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc05g054140.3.1
CDS Infomation	DNA-directed RNA polymerase I subunit rpa43-like protein (AHRD V3.3 *** T2DMP5_PHAVU)
Sequence	ATGGAGGCTCTGAAAGAGTGTAGGGCGAATTTGCTTGTGTATTTACATCCATCTAACGCC AAAAATGTCGAAACCGCAGTTTATCGCGAACTCAGTTCACTGCTTTTCAAGTTTAATGAA GCTTTAGATGGTGTGGTATTGACTTATGAACCCAAGTTCAGTAGCAATTTGGCTAGAATT CTTCCAGGAATTCACCCTTATTTTGGTGTGAAACTTGAAGCAAAATTGCTACTTTTTAAT CCAAAGCCAGAAATGCTATTAGAAGGTGAGGTCGTTAAAGTTGGCCAGCAGTCTATTCAC ATAGTTGTTCTTGGTTTTTCTTCGGCTGTCATAGCAGATGAGGACATTCGAGAAGATTTC AAGTATAAAATTAAACACGGGAAAGAAGTTTTTGTTAGCAGATCAAACAAGAAACACAGG ATCAAAGTGGGAACTACTCTACGGTTCTCAGTTAAGAATTTTGATGAAGAGATACTACAT ATGTGTGGGTCATTAATTCCAGATAACACAGGAAATATTCAATGGTTGGAAACGAAAGCA GAAGAGTCTCAAGCTTACAGCATTACGGAGAAGAGGATAGGCAACAAAAGGGCTGCTGAA TTGCTTGAGCCAGATAACTTAGTACCCTACAAGGGAAAGCTGAAATCTGAAAATCATATT AAGAAATCAAAAAGATCTAAAAGCAGAGACAGCTGA

Peptide Sequence

PEP ID	Solyc05g054140.3.1
PEP Infomation	DNA-directed RNA polymerase I subunit rpa43-like protein (AHRD V3.3 *** T2DMP5_PHAVU)
Sequence	MEALKECRANLLVYLHPSNAKNVETAVYRELSSLLFKFNEALDGVVLTYEPKFSSNLARI LPGIHPYFGVKLEAKLLLFNPKPEMLLEGEVVKVGQQSIHIVVLGFSSAVIADEDIREDF KYKIKHGKEVFVSRSNKKHRIKVGTTLRFSVKNFDEEILHMCGSLIPDNTGNIQWLETKA EESQAYSITEKRIGNKRAAELLEPDNLVPYKGKLKSENHIKKSKRSKSRDS*

Transcript Sequence

Transcript ID	Solyc05g054140.3.1
Transcript Infomation	DNA-directed RNA polymerase I subunit rpa43-like protein (AHRD V3.3 *** T2DMP5_PHAVU)
Sequence	AATTATTTATTACTTCTACATCTCCTCTTCTAAGATTTTAGGGTTTAACATAAACCCTAA CAAAATTGGGCATCAATGGAGGCTCTGAAAGAGTGTAGGGCGAATTTGCTTGTGTATTTA CATCCATCTAACGCCAAAAATGTCGAAACCGCAGTTTATCGCGAACTCAGTTCACTGCTT TTCAAGTTTAATGAAGCTTTAGATGGTGTGGTATTGACTTATGAACCCAAGTTCAGTAGC AATTTGGCTAGAATTCTTCCAGGAATTCACCCTTATTTTGGTGTGAAACTTGAAGCAAAA TTGCTACTTTTTAATCCAAAGCCAGAAATGCTATTAGAAGGTGAGGTCGTTAAAGTTGGC CAGCAGTCTATTCACATAGTTGTTCTTGGTTTTTCTTCGGCTGTCATAGCAGATGAGGAC ATTCGAGAAGATTTCAAGTATAAAATTAAACACGGGAAAGAAGTTTTTGTTAGCAGATCA AACAAGAAACACAGGATCAAAGTGGGAACTACTCTACGGTTCTCAGTTAAGAATTTTGAT GAAGAGATACTACATATGTGTGGGTCATTAATTCCAGATAACACAGGAAATATTCAATGG TTGGAAACGAAAGCAGAAGAGTCTCAAGCTTACAGCATTACGGAGAAGAGGATAGGCAAC AAAAGGGCTGCTGAATTGCTTGAGCCAGATAACTTAGTACCCTACAAGGGAAAGCTGAAA TCTGAAAATCATATTAAGAAATCAAAAAGATCTAAAAGCAGAGACAGCTGAATGTGCTCA TTGTACGCATACATCAGAACAATTTTTTGTGCCTCGACTCTCATGCTAAGGCTAGTTACA TACGTTGAATTTGGACCCGAAAGTGGATATCAAAACTACAGAGAATTAGTTGAACAACTT GGACGCGAGGTGATTTGTGTAGAAGGGACCAGTAAAGACGTCATGCCCGCTGGTTTATGT TGTTATCATGATAATATAGGAGGAAGATGAAACTTTAGTTATGCATAATCATTTATCAAT GTAATCTTCTCAGTTTTGCTCAACTTGAGTGACATTAGTGCCAATACAAATGACTCGGTC TTTTTCTCAGAATTGTCAAAGTTAAACCAGGTCTGCTTTCTGTGTAGTGCCACATCATGT TACAATACCTATCAGTCTAAATGCAAGGGCAGCAAAGATGCACATTATTTATAATATGCA CCATTTAAACAAGGCAAAGTAGCTAGGGATGTACCTAGTAGTAGGTATTTGATGGAACAA ACGAGGTGCACGCAAGATGGTTTAGATACTAGAATCGTTAATTGAATATTACTATTGATG TTATGACTTATCCTTGACCTAATGACTTTGGAGCAACCTGTTCAGATAGATGTATCCTCG ACCTAATGACTTCCTTGTTCAAAAGCTAGATTCATAATTTGGCTATGTTTTCCATTTAAG TGTGTGTGTTGTTTAAATATTTTGAAAACAAATAAGATGCATGCATATTAATTTTCTCAA CATGACATAAGAAAAATTACAAAAATAAATTGTCAAGAATGGGATTCGA