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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g053930.3.1
CDS Infomation

Protein kinase (AHRD V3.3 *** A3RI54_SOLTU)
Sequence

ATGGGGATTTGTCTGAGTAACCAAATCAAGGCCGAGACAACATTTTATACTGTTTCAGGG
AAATTTGCTTTGTCTTTGGAGATTAGTAGTGATTTCTTTCTACTGTTGGATGTACTTTTG
ATTCTTTTGCTTACTGTCTTTTGTTGGCATTGTAAATGGATTGTTTTAGGGTTGGATTCA
AGAAATGTCAGTGGAAATGGTACAGATATTAGTAATTCGAATAGCAAACACTCACCGACG
ACTCCTCGGAGTGAGGGTGAGATCTTGCAATCATCCAACTTGAGGAGCTTCACTCTCAGT
GAACTTCGATCTGCAACCAGAAATTTCCATCGTGACAGTGTAGTTGTAGAAGGAGGTTTT
GGTTCAGTTTTCAAAGGCTGGGTCGACGAACATACTCTTGCAGCATCAATGCCTGGCACA
GGGATTGTGATAGCTGTGAAAAACTTAGACCAAGAAGGGTGGCAGGGGCACAGAGAATGG
CTGGCTGAGATAAACTATCTTGGGCAACTACACCATCCAAATCTTGAAAATTTGATCGGT
TATTGCTTAGAGGAAGATCATAGGCTCTTGGTCTATGAGTATAGGCCTGAGGGTAGCATG
GAGAATCATCTATTTCGGAGAGGTTCATACTACCAACCACTTTCTTGGAGCCTTCGTATG
AAAGTTGCACTTGGTGCTGCAAGGGGCCTTGCTTTTCTTCATAATGCTGAAATAAAAGTT
ATTTACAGGGACTTCAAGACTTCTAATATTCTGCTGGACTCGGACTACAATGCCAAGCTT
TCTGATTTTGGGTTGGCCAGAGATGGTCCCGTAGGTGATCAGAGCCACGTGTCTACTCGG
GTTGTGGGAACTTATGGATATGCTGCTCCAGAGTACCTAGCCACAGGTTTGTCTCCATGC
TACCCAATTCCATTTTCAAGTTCACAATCTGATGGCCATCTTACTGCCAAGAGTGATGTA
TACAGCTTCGGGGTAGTTCTGTTAGAAATTCTATCCGGTAAGAAAGCAATAGACAAGAAT
CGACCGATGGGGGAACATAATCTTGTTGATTGGGCAAAACCTTATTTGACCAGTAAACTT
AGAGTTTCCCGTGTTCTAGATGCCCGTCTTGAAGGACAATATTCACTCAGTCATGCCTTA
AAGGTTGCTATCCTGTCTTTTCAATGCATATCGACGGAACCCAAGTCAAGGCCAACAATG
GACGAAGTAGTAACAGCTCTAGAACAGCTTCAGCAGTCCAAGGATGTAGCAAAAAATGAT
AAGAAAGTCCGGCAGGTAAATCAGCATAGTCAATCAAGTTTTGCGTTCAAAAAGTCCTGC
AAAAGCAGCACGGAAGAGACTCCCGCGGAATCCAATTACCCAAGACCTTCACTTTCATTC
CTCTCATAG

Peptide Sequence

PEP ID

Solyc05g053930.3.1
PEP Infomation

Protein kinase (AHRD V3.3 *** A3RI54_SOLTU)
Sequence

MGICLSNQIKAETTFYTVSGKFALSLEISSDFFLLLDVLLILLLTVFCWHCKWIVLGLDS
RNVSGNGTDISNSNSKHSPTTPRSEGEILQSSNLRSFTLSELRSATRNFHRDSVVVEGGF
GSVFKGWVDEHTLAASMPGTGIVIAVKNLDQEGWQGHREWLAEINYLGQLHHPNLENLIG
YCLEEDHRLLVYEYRPEGSMENHLFRRGSYYQPLSWSLRMKVALGAARGLAFLHNAEIKV
IYRDFKTSNILLDSDYNAKLSDFGLARDGPVGDQSHVSTRVVGTYGYAAPEYLATGLSPC
YPIPFSSSQSDGHLTAKSDVYSFGVVLLEILSGKKAIDKNRPMGEHNLVDWAKPYLTSKL
RVSRVLDARLEGQYSLSHALKVAILSFQCISTEPKSRPTMDEVVTALEQLQQSKDVAKND
KKVRQVNQHSQSSFAFKKSCKSSTEETPAESNYPRPSLSFLS*

Transcript Sequence

Transcript ID

Solyc05g053930.3.1
Transcript Infomation

Protein kinase (AHRD V3.3 *** A3RI54_SOLTU)
Sequence

AAATGAATTTTTTTTTTTCATTCATAGGCAAGTGGGGTTAAAGAATTACAAAGAATGTTC
ATCAGAAAGTTTCAATCTTTTTCTTTTTTTCTCCAAAGTTACTGTCATTTCTTAATGTAG
AGGAAGATTCTTGGGTTCACACTAGATCTGGGGTTCAATGAACTTTTGGGGTTTGTATTT
AAGTAACAACTGGTGTTAATCTGTGCATATAATGCTGAAAACTTGAGTTTTGCAGTTTGT
CTGGTGGCTAGTGGCTAGTGGAGCTAAAAAGATTGAATTTTGGGGTGTTTTTTGCTCTAA
TGGGGATTTGTCTGAGTAACCAAATCAAGGCCGAGACAACATTTTATACTGTTTCAGGGA
AATTTGCTTTGTCTTTGGAGATTAGTAGTGATTTCTTTCTACTGTTGGATGTACTTTTGA
TTCTTTTGCTTACTGTCTTTTGTTGGCATTGTAAATGGATTGTTTTAGGGTTGGATTCAA
GAAATGTCAGTGGAAATGGTACAGATATTAGTAATTCGAATAGCAAACACTCACCGACGA
CTCCTCGGAGTGAGGGTGAGATCTTGCAATCATCCAACTTGAGGAGCTTCACTCTCAGTG
AACTTCGATCTGCAACCAGAAATTTCCATCGTGACAGTGTAGTTGTAGAAGGAGGTTTTG
GTTCAGTTTTCAAAGGCTGGGTCGACGAACATACTCTTGCAGCATCAATGCCTGGCACAG
GGATTGTGATAGCTGTGAAAAACTTAGACCAAGAAGGGTGGCAGGGGCACAGAGAATGGC
TGGCTGAGATAAACTATCTTGGGCAACTACACCATCCAAATCTTGAAAATTTGATCGGTT
ATTGCTTAGAGGAAGATCATAGGCTCTTGGTCTATGAGTATAGGCCTGAGGGTAGCATGG
AGAATCATCTATTTCGGAGAGGTTCATACTACCAACCACTTTCTTGGAGCCTTCGTATGA
AAGTTGCACTTGGTGCTGCAAGGGGCCTTGCTTTTCTTCATAATGCTGAAATAAAAGTTA
TTTACAGGGACTTCAAGACTTCTAATATTCTGCTGGACTCGGACTACAATGCCAAGCTTT
CTGATTTTGGGTTGGCCAGAGATGGTCCCGTAGGTGATCAGAGCCACGTGTCTACTCGGG
TTGTGGGAACTTATGGATATGCTGCTCCAGAGTACCTAGCCACAGGTTTGTCTCCATGCT
ACCCAATTCCATTTTCAAGTTCACAATCTGATGGCCATCTTACTGCCAAGAGTGATGTAT
ACAGCTTCGGGGTAGTTCTGTTAGAAATTCTATCCGGTAAGAAAGCAATAGACAAGAATC
GACCGATGGGGGAACATAATCTTGTTGATTGGGCAAAACCTTATTTGACCAGTAAACTTA
GAGTTTCCCGTGTTCTAGATGCCCGTCTTGAAGGACAATATTCACTCAGTCATGCCTTAA
AGGTTGCTATCCTGTCTTTTCAATGCATATCGACGGAACCCAAGTCAAGGCCAACAATGG
ACGAAGTAGTAACAGCTCTAGAACAGCTTCAGCAGTCCAAGGATGTAGCAAAAAATGATA
AGAAAGTCCGGCAGGTAAATCAGCATAGTCAATCAAGTTTTGCGTTCAAAAAGTCCTGCA
AAAGCAGCACGGAAGAGACTCCCGCGGAATCCAATTACCCAAGACCTTCACTTTCATTCC
TCTCATAGAAAGAAGAAAGAAAGCTTTTGGTGTGCCAGTTACTAGTACCACTTTTGTTCA
AGAACTTGCTGGCATATAACTAAGAACATGTCTTCAACAAGGATGTACAGCTTGTCCTCT
TTCTGTTCTTTGTGTTTTAGTTTGTTGGATAATGTTTGAACAATAGATTTATGTGTGCTC
AGTTTATTAGTTATGTAAGTTTACCTACTATTAGAGTTCTATTTACTACAAC