Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g053720.3.1
CDS Infomation

O-fucosyltransferase family protein (AHRD V3.3 *** AT1G04910.1)
Sequence

ATGCGGAGGCCTGGATATCGGCAACCGCTGAAGCAGCAATTAGGAGGTGTTAAGGCAATG
TTCTTAAGGCTCTCGGTTGCTGTAATCGTTGTCGTGATTTGTATGTTCCTGCTTATGTCT
GCGATGTCGAGTAGTAATAGTAACAGTTCGTCAGCTGAGATTAATGCAGAGGCACTCTGG
GGAACTGCTGCTTCTGATGGTTGGAGGGCGTCATCTGCTCCTCGATCAGATTGGCCTCCT
CCTGCCAGTGAAAGCAATGGCTATTTACGGGTTCGGTGTAATGGTGGTCTGAACCAACAA
CGTAGTGCAGTGCAACATCATCTTCCGGAAGTAGGTCATAAAGTTGGTCTACAACATCAA
CTTCGGAAAGTAGAGCTAGATAGGAAGGTTTCCTTGTCATATTGGAAGGATGGGTCAAAG
AAGCTTGTGAACAAGAAAGATTTGGATAGATCTAGTCTTAGTGTTCTAGTAAAGTTTCTT
GCTGCACGAATTATGAATGCTACACTGGTGTTACCTGAGTTGGATGCAAATTCCTTCTGG
CACGATGATAGTGGGTTTCAAGGTATCTACGATGTTGAACATTTTATTAAGACATTGAAG
TATGATGTAAGAATAGTGGAAAGCATTCCTGAAATCCGAAAAAATGGAAAGGTAAAGAAG
ATAAAAGCAAAACAGATTCGACCTCCTAGAGATGCTCCTATCAGTTGGTATACAACAGAG
GCTCTAAAGACAATGAAGGAACACGGTGCTATTTATCTTACTCCTTTTTCACATAGACTG
GCTGAAGAAATCGATTATCCTGAGTACCAGCGGCTGAGATGTAGAGTTAACTATCATGCC
CTTCGATTTAAGCCTCATATTATGGATTTAAGCCAATCAATTGTCACTAAACTTCGTTCG
CAAGGCCACTTTATGACAATACATCTTCGTTTTGAGATGGATATGCTAGCATTTGCTGGG
TGCTTTGACATATTTTCTCCTGAGGAGCAAAAGATTTTGAAGAAGTATAGACGGGAAAAT
TTTGCAGAAAAGAGACTTATATATGATGAAAGAAGGGCAATTGGGAAATGTCCACTAACT
CCAGAAGAGGTGGGTCTTATTTTACGCGCAATGGGTTTTGACAACTCTACTAGGATATAC
CTTGCTGCAGGTGAGCTCTTTGGTGGTGAGCGATTCATGAAACCTTTCCGTTCCTTGTTC
CCCCGCTTGGAGAACCATAGTACAGTGGACACCACAGGTGAGCTGGGGAAAAACACTATG
GGCTTGTTAGGTTCAGCTGTGGATTATATGGTTTGTCTTCTCTCTGATATTTTCATGCCA
ACATATGATGGACCAAGCAATTTCGCGAACAATCTCCTTGGTCATCGGTTATACTATGGT
TTTCGCACGACAATCCGACCTGATAGGAAAGCACTGGCTCCTATCTTTATTGATCGTGAG
AAGGGTCATACAGCAGGTTTTGATGAAGCAGTTAGGCGTGCCATGTTAAAAACAAACTTC
GGTGGACCTCATAAGCGGATCTCACCTGAATCATTTTATACTAATTCTTGGCCAGAGTGC
TTTTGTAAAAAATCAGCTGTAAATCCTGCTGATAAATGTCCACCACATGACGTTGTTGAA
GTCTTAAATAGTCAAATGGAGAGGGAAGGAATCAGTGACTTTGAGGCAAGTGGATCAAAT
TTGACGTTAGCCATGGATAAATAG

Peptide Sequence

PEP ID

Solyc05g053720.3.1
PEP Infomation

O-fucosyltransferase family protein (AHRD V3.3 *** AT1G04910.1)
Sequence

MRRPGYRQPLKQQLGGVKAMFLRLSVAVIVVVICMFLLMSAMSSSNSNSSSAEINAEALW
GTAASDGWRASSAPRSDWPPPASESNGYLRVRCNGGLNQQRSAVQHHLPEVGHKVGLQHQ
LRKVELDRKVSLSYWKDGSKKLVNKKDLDRSSLSVLVKFLAARIMNATLVLPELDANSFW
HDDSGFQGIYDVEHFIKTLKYDVRIVESIPEIRKNGKVKKIKAKQIRPPRDAPISWYTTE
ALKTMKEHGAIYLTPFSHRLAEEIDYPEYQRLRCRVNYHALRFKPHIMDLSQSIVTKLRS
QGHFMTIHLRFEMDMLAFAGCFDIFSPEEQKILKKYRRENFAEKRLIYDERRAIGKCPLT
PEEVGLILRAMGFDNSTRIYLAAGELFGGERFMKPFRSLFPRLENHSTVDTTGELGKNTM
GLLGSAVDYMVCLLSDIFMPTYDGPSNFANNLLGHRLYYGFRTTIRPDRKALAPIFIDRE
KGHTAGFDEAVRRAMLKTNFGGPHKRISPESFYTNSWPECFCKKSAVNPADKCPPHDVVE
VLNSQMEREGISDFEASGSNLTLAMDK*

Transcript Sequence

Transcript ID

Solyc05g053720.3.1
Transcript Infomation

O-fucosyltransferase family protein (AHRD V3.3 *** AT1G04910.1)
Sequence

CAATAATAAATTTACCAATTTTTCGAAAATACATTTTTTGTTATAGCTAACACTTACCGA
TATATTTTTTAATTAAGCCAACCTGTAAAAAAAATTAAAAACATTGATTGTACACCCGTA
AGTAATGGTAGCACAAATTTCTAAAACTAAAAAAACCACTGACTTCAATAACACGATTAT
ATGTATACGAATACGAATTGTTTCCTCTATTTCTCACTCTTAAATTTTTAGTCCTTCAAT
TCGCCTAGTGTCGGCAGATTTCTCCAGAGATTCAGCGCACGTAATTCTTCTCAACTTTGA
AGCTTCGCGGATTTTTCCATTTCTCGGATCTCAGCAAAAATGCGGAGGCCTGGATATCGG
CAACCGCTGAAGCAGCAATTAGGAGGTGTTAAGGCAATGTTCTTAAGGCTCTCGGTTGCT
GTAATCGTTGTCGTGATTTGTATGTTCCTGCTTATGTCTGCGATGTCGAGTAGTAATAGT
AACAGTTCGTCAGCTGAGATTAATGCAGAGGCACTCTGGGGAACTGCTGCTTCTGATGGT
TGGAGGGCGTCATCTGCTCCTCGATCAGATTGGCCTCCTCCTGCCAGTGAAAGCAATGGC
TATTTACGGGTTCGGTGTAATGGTGGTCTGAACCAACAACGTAGTGCAGTGCAACATCAT
CTTCCGGAAGTAGGTCATAAAGTTGGTCTACAACATCAACTTCGGAAAGTAGAGCTAGAT
AGGAAGGTTTCCTTGTCATATTGGAAGGATGGGTCAAAGAAGCTTGTGAACAAGAAAGAT
TTGGATAGATCTAGTCTTAGTGTTCTAGTAAAGTTTCTTGCTGCACGAATTATGAATGCT
ACACTGGTGTTACCTGAGTTGGATGCAAATTCCTTCTGGCACGATGATAGTGGGTTTCAA
GGTATCTACGATGTTGAACATTTTATTAAGACATTGAAGTATGATGTAAGAATAGTGGAA
AGCATTCCTGAAATCCGAAAAAATGGAAAGGTAAAGAAGATAAAAGCAAAACAGATTCGA
CCTCCTAGAGATGCTCCTATCAGTTGGTATACAACAGAGGCTCTAAAGACAATGAAGGAA
CACGGTGCTATTTATCTTACTCCTTTTTCACATAGACTGGCTGAAGAAATCGATTATCCT
GAGTACCAGCGGCTGAGATGTAGAGTTAACTATCATGCCCTTCGATTTAAGCCTCATATT
ATGGATTTAAGCCAATCAATTGTCACTAAACTTCGTTCGCAAGGCCACTTTATGACAATA
CATCTTCGTTTTGAGATGGATATGCTAGCATTTGCTGGGTGCTTTGACATATTTTCTCCT
GAGGAGCAAAAGATTTTGAAGAAGTATAGACGGGAAAATTTTGCAGAAAAGAGACTTATA
TATGATGAAAGAAGGGCAATTGGGAAATGTCCACTAACTCCAGAAGAGGTGGGTCTTATT
TTACGCGCAATGGGTTTTGACAACTCTACTAGGATATACCTTGCTGCAGGTGAGCTCTTT
GGTGGTGAGCGATTCATGAAACCTTTCCGTTCCTTGTTCCCCCGCTTGGAGAACCATAGT
ACAGTGGACACCACAGGTGAGCTGGGGAAAAACACTATGGGCTTGTTAGGTTCAGCTGTG
GATTATATGGTTTGTCTTCTCTCTGATATTTTCATGCCAACATATGATGGACCAAGCAAT
TTCGCGAACAATCTCCTTGGTCATCGGTTATACTATGGTTTTCGCACGACAATCCGACCT
GATAGGAAAGCACTGGCTCCTATCTTTATTGATCGTGAGAAGGGTCATACAGCAGGTTTT
GATGAAGCAGTTAGGCGTGCCATGTTAAAAACAAACTTCGGTGGACCTCATAAGCGGATC
TCACCTGAATCATTTTATACTAATTCTTGGCCAGAGTGCTTTTGTAAAAAATCAGCTGTA
AATCCTGCTGATAAATGTCCACCACATGACGTTGTTGAAGTCTTAAATAGTCAAATGGAG
AGGGAAGGAATCAGTGACTTTGAGGCAAGTGGATCAAATTTGACGTTAGCCATGGATAAA
TAG