Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc05g053690.2.1
CDS Infomation	Ubiquitin carboxyl-terminal hydrolase 2 (AHRD V3.3 *** A0A0B2QQX6_GLYSO)
Sequence	ATGGGGAAAAGGGCTAAAAAAAAGGCTAGAAGTGGTGTCAAGGAGACGCGGAATCCCGTT GCATCTGCAAATCGTATTGATGAAAAGAGCAGTCCGAATATTGATACTCCTGATGTTGCA GTTTTTGTTGTAAAAGATAGAAAAGAATGTCCACATGTTGATAAGGTTATTGATGTGGGC AAAGTCTCCGCTAAACTTGAATCTTCGGAACCTGTTAGGTGTGAGGATTGCAGGGAAGGA GCAGCTGATAGACAAGCTAGTAGGACAAAAGGTAAGCATGGAAAAAAGAAGGGAAGTGCA GATCCCAAGAAGAAGTCTAAAGCCATTTGGGTCTGCTTAGTATGCGGCCATTTCTCGTGC GGAGGTGTTGGATTGCCTACTACACCTCAGAGCCATGCAGTTCGGCATGCGAGACAATAC CATCACCCTCTCGCTGTACAGTTTGAAAATTCTCAATTGCGCTGGTGTTTTCTGTGCAAC ACACTACTTCATGCTAAAAAAGTAGAGGATGGCAGTGAACAAAAGGATGTACTTGACGAC ATTGCAAAGATGATTAAAAGGCGTCCGTCTGAAGGGCCTACTACTGATGTGGAAGCTGTT TGGTTCGGGAGTGGGAGTGTCACTAGCGAAATTAAATCAGAAGCTTCTGCTTCTATAAGT GCTGATGGAAAAGGTGGTTGTGCCATTAGGGGATTGGTTAATTTAGGGAACACATGTTTT TTCAATTCGATAATGCAGAACCTACTGGCAATGAATAGACTAAGGGATTACTTTCTTAAA TTTGATGGTTTTGCTGGTCCTCTTACCGCTGATCTGAAGAAGCTCTTTACTGACACCAGC AATGAAGCTGCGCTGAAAGGATCTGTTAATCCAAAATCTTTGTTTGGTTCAATATGTACC AAAGCTCCACAGTTTCGAGGATACCAACAGCAGGACAGTCACGAATTGCTTCGCTGTTTA CTTGATTGTCTGTGTACTGAGGCATTGACGCGCAGAAAGCTAATCAAATCTTCTCAGGAT GACGGTAAATCCCGGAGTTCATGTCCAACGTTTGTCGATGAGATTTTTGGTGGTCGACTC TCTAGCACTGTTAGCTGTCTTGAATGTGGGCACACTTCAGTAGTCTATGAACCATTCTTG GATCTCTCCTTGCCTGTTCAGACTAAAAAACCTCCTTCTAAAGGAGCTCAATCAGTCTCC CATGCCAAAATATCAAAACCTCCAAAGAGAAGTGGAAAAGTTTTTTCTAAAGTTAGCAGA GATGCAGCTTCTCTCAATTCTCAACGAAAGGGAGAGAAATCTCTCAGCCGTGTGTATCCT AGAGTACCTGTCACTGAAGGAATGATACTTCCTTCTGATACATCGCTAGAATCCACTGAT GCTGGTGTTATGGCTGATAATACAGGTTTAACTTCACAGGACTCATGTTTCACTCAGAAG TCCCGTAATGAGGAAACTTGCGAGGGTGTGACTAGGCAGTTGGCGATGGTTGATGACTCG ACATGGTTAGATTTTCTCGAACAGGAAACACTGCCAAATGTTGATGACGCAGCTTCAGAA GTTGATCACATCGTGACTAATCAAGGTTCTGAAACTGGATCTGTTCAATCTGTTGACCCT TTGCAAAATAATCTGGACGCTGATACAGAGATGAAGTTGACATGTACAAACAGCACTCGT TCTCCTAATGATTTAATGTGTTTGGATGACCAAGGACAATCCAAATCACCAGACTGTGAT ATAGCTTCTGAATTCAGTAAAAAGCTACTGATTAAAGAGTCTGAAAAGATCAGCTCTGTG GATTCAAATCATGGAACAGATTCATTTACGAGGTTATCGGAAGATGAAGCCCCGTTACGA CTACAAGAGTCAGAGATTCTGTTACTTCCATACAAAGAAGTAACCTCAACTGCTGGTGAC ATGTTAAATGAAGGTTGTGAGGTATCCTCAGCTGCTGTTGGTAGGGAAGAAGTTTCATTT AATGAGCCTGAGTCTGATGCACAGTCTTTGTGCAATGCTTCTGTTTCTCAGGCCAATGGA CTGAGAGAAGCTAGTTTTACTGTTTCAAACATCAGCATGTCTGATCCGGAAGAGCTTGAT ATTACAGATGCTCCTGTATCAGTGAAGAGTTGTTTGGCTTATTTTACAAAGCCTGAGCTT CTTTCCAAAAGTGAACATGCTTGGCAATGTGAAAATTGCACAAAAGTTCTAAAAGAAAAG AGAATGAGATCTAAGAATAAATTGACGAAGCCTAGATCACATAGCATGGTAAATGGACAC GAGGACAAAAATCCAGATGGTGTGTCTTCTTCAGGAACATTCCCAAAGGGAACCAGCCCT CGAGCTGATCGAGATTCAGGGTCTTCGCTATCGGAAAACGGCACACAGGAAAATCACAGT GAAACTAGCAGTCAAGTGAATATAGACTATCAGACCAATAAAGTTCAATTGCTGGAAGCT CCGCTGGTTTCTGATATATCTGAATCTGAAGAAAGTGAGAATGAGGAGACAGACTATAAA AGAGTTAGAGTTGAAAGGGATGCAACTAAGCGGATCCTAATTGATAAGGTCCCTCCTATT TTGTCAATTCATCTAAAGAGGTTCCGTCAAGATGCTCGGGGGCGCTTGAGTAAGCTGAGT TGCCATGTCAATTTTAGAGAAGCACTTGATCTGAAACCATATGTTGACACCAGGTACCTG CAGAAGGATACATACAAATACCAGCTTATTGGTGTAGTAGTACATTCGGGTACGATGAGG GGAGGTCATTATGTTGCATATGTTAGAGGAGGTCCCAAGATCACAGGGAAAGAAGAGAAC GAGGAAGATTTCGTGTGGTATTATGCAAGTGATACTCATGTTCGTGAGGTTTCATTAAAA GATGTTCTTCGCTCTGAGGCATACATTTTATTCTACGAAGAAACTTGA

Peptide Sequence

PEP ID	Solyc05g053690.2.1
PEP Infomation	Ubiquitin carboxyl-terminal hydrolase 2 (AHRD V3.3 *** A0A0B2QQX6_GLYSO)
Sequence	MGKRAKKKARSGVKETRNPVASANRIDEKSSPNIDTPDVAVFVVKDRKECPHVDKVIDVG KVSAKLESSEPVRCEDCREGAADRQASRTKGKHGKKKGSADPKKKSKAIWVCLVCGHFSC GGVGLPTTPQSHAVRHARQYHHPLAVQFENSQLRWCFLCNTLLHAKKVEDGSEQKDVLDD IAKMIKRRPSEGPTTDVEAVWFGSGSVTSEIKSEASASISADGKGGCAIRGLVNLGNTCF FNSIMQNLLAMNRLRDYFLKFDGFAGPLTADLKKLFTDTSNEAALKGSVNPKSLFGSICT KAPQFRGYQQQDSHELLRCLLDCLCTEALTRRKLIKSSQDDGKSRSSCPTFVDEIFGGRL SSTVSCLECGHTSVVYEPFLDLSLPVQTKKPPSKGAQSVSHAKISKPPKRSGKVFSKVSR DAASLNSQRKGEKSLSRVYPRVPVTEGMILPSDTSLESTDAGVMADNTGLTSQDSCFTQK SRNEETCEGVTRQLAMVDDSTWLDFLEQETLPNVDDAASEVDHIVTNQGSETGSVQSVDP LQNNLDADTEMKLTCTNSTRSPNDLMCLDDQGQSKSPDCDIASEFSKKLLIKESEKISSV DSNHGTDSFTRLSEDEAPLRLQESEILLLPYKEVTSTAGDMLNEGCEVSSAAVGREEVSF NEPESDAQSLCNASVSQANGLREASFTVSNISMSDPEELDITDAPVSVKSCLAYFTKPEL LSKSEHAWQCENCTKVLKEKRMRSKNKLTKPRSHSMVNGHEDKNPDGVSSSGTFPKGTSP RADRDSGSSLSENGTQENHSETSSQVNIDYQTNKVQLLEAPLVSDISESEESENEETDYK RVRVERDATKRILIDKVPPILSIHLKRFRQDARGRLSKLSCHVNFREALDLKPYVDTRYL QKDTYKYQLIGVVVHSGTMRGGHYVAYVRGGPKITGKEENEEDFVWYYASDTHVREVSLK DVLRSEAYILFYEET*

Transcript Sequence

Transcript ID	Solyc05g053690.2.1
Transcript Infomation	Ubiquitin carboxyl-terminal hydrolase 2 (AHRD V3.3 *** A0A0B2QQX6_GLYSO)
Sequence	ATTTTATAATTTTAGTGGTACCTCTTCTTACGGTTAGCAAACATATATTAGTAAACCTAA ATCGTCTAGGAAAACAATAAACGATTTCTATATATTTGGAGAAGAACGACTTTTCATAGG ACTAAATACTTATACACTAATTTGTGATTATTCACATTATACAGTAGAAGACTGCGGAAT AATATTTTCAAAACATTCTTCGAAATTATTTAGCGTCAAGAGGTATGTATTAATTTTAAT TTATAACTTCTTAGTTATTCATACCTTATTTATAAAATTATTCAGTACTTATCAAGAACT CTTCAACTATATAGTAAATAACCATAATTATTTATTTTTTCAATAAATTAATTTAGCATT AATAATAATAATAAAAAATTTAGATGAAAAGTGTACAGGATTTAATTATAAATGTATTTA TTAGTTTCATACAAACGCAAAACACAAGTAATCCTTTTATTTGTTCAAATTTTAGTATAA TGAGGTGTTCATAAAGTTAAATCGATGAAAATTAACCGTAATAAATACCTTATAAATTAT TCATTTGTTTTGAAATAAAAGAGTAAATTTTGAAATTAAATTTAAAATTAACTTTATCAT ACATTTGATTATTTTAAATTTATAATTATTATATTAAAATAATATAATTTTCGACTAAAA CCTCACATAAAAATTTAATTAATCGAATCTCGCGTATCAAATAACCGACACATGTGGTGG AATGGGCCAAAATGAGCCAAACCCCCCCTCCCCTCCCTGTAGGGCTTGCCATATTGAGGT TTTTTGAATTTGCTCCCCCCTCCCCAAAAACCCCCACACCACAACCCAAATGATGAGTCA ATTGATAAATTATTTGAAAATTAACTGAAGAAATCTCTCACCTTTTTTCTCCATATAGTT ATTGGGAATAATGGGGAAAAGGGCTAAAAAAAAGGCTAGAAGTGGTGTCAAGGAGACGCG GAATCCCGTTGCATCTGCAAATCGTATTGATGAAAAGAGCAGTCCGAATATTGATACTCC TGATGTTGCAGTTTTTGTTGTAAAAGATAGAAAAGAATGTCCACATGTTGATAAGGTTAT TGATGTGGGCAAAGTCTCCGCTAAACTTGAATCTTCGGAACCTGTTAGGTGTGAGGATTG CAGGGAAGGAGCAGCTGATAGACAAGCTAGTAGGACAAAAGGTAAGCATGGAAAAAAGAA GGGAAGTGCAGATCCCAAGAAGAAGTCTAAAGCCATTTGGGTCTGCTTAGTATGCGGCCA TTTCTCGTGCGGAGGTGTTGGATTGCCTACTACACCTCAGAGCCATGCAGTTCGGCATGC GAGACAATACCATCACCCTCTCGCTGTACAGTTTGAAAATTCTCAATTGCGCTGGTGTTT TCTGTGCAACACACTACTTCATGCTAAAAAAGTAGAGGATGGCAGTGAACAAAAGGATGT ACTTGACGACATTGCAAAGATGATTAAAAGGCGTCCGTCTGAAGGGCCTACTACTGATGT GGAAGCTGTTTGGTTCGGGAGTGGGAGTGTCACTAGCGAAATTAAATCAGAAGCTTCTGC TTCTATAAGTGCTGATGGAAAAGGTGGTTGTGCCATTAGGGGATTGGTTAATTTAGGGAA CACATGTTTTTTCAATTCGATAATGCAGAACCTACTGGCAATGAATAGACTAAGGGATTA CTTTCTTAAATTTGATGGTTTTGCTGGTCCTCTTACCGCTGATCTGAAGAAGCTCTTTAC TGACACCAGCAATGAAGCTGCGCTGAAAGGATCTGTTAATCCAAAATCTTTGTTTGGTTC AATATGTACCAAAGCTCCACAGTTTCGAGGATACCAACAGCAGGACAGTCACGAATTGCT TCGCTGTTTACTTGATTGTCTGTGTACTGAGGCATTGACGCGCAGAAAGCTAATCAAATC TTCTCAGGATGACGGTAAATCCCGGAGTTCATGTCCAACGTTTGTCGATGAGATTTTTGG TGGTCGACTCTCTAGCACTGTTAGCTGTCTTGAATGTGGGCACACTTCAGTAGTCTATGA ACCATTCTTGGATCTCTCCTTGCCTGTTCAGACTAAAAAACCTCCTTCTAAAGGAGCTCA ATCAGTCTCCCATGCCAAAATATCAAAACCTCCAAAGAGAAGTGGAAAAGTTTTTTCTAA AGTTAGCAGAGATGCAGCTTCTCTCAATTCTCAACGAAAGGGAGAGAAATCTCTCAGCCG TGTGTATCCTAGAGTACCTGTCACTGAAGGAATGATACTTCCTTCTGATACATCGCTAGA ATCCACTGATGCTGGTGTTATGGCTGATAATACAGGTTTAACTTCACAGGACTCATGTTT CACTCAGAAGTCCCGTAATGAGGAAACTTGCGAGGGTGTGACTAGGCAGTTGGCGATGGT TGATGACTCGACATGGTTAGATTTTCTCGAACAGGAAACACTGCCAAATGTTGATGACGC AGCTTCAGAAGTTGATCACATCGTGACTAATCAAGGTTCTGAAACTGGATCTGTTCAATC TGTTGACCCTTTGCAAAATAATCTGGACGCTGATACAGAGATGAAGTTGACATGTACAAA CAGCACTCGTTCTCCTAATGATTTAATGTGTTTGGATGACCAAGGACAATCCAAATCACC AGACTGTGATATAGCTTCTGAATTCAGTAAAAAGCTACTGATTAAAGAGTCTGAAAAGAT CAGCTCTGTGGATTCAAATCATGGAACAGATTCATTTACGAGGTTATCGGAAGATGAAGC CCCGTTACGACTACAAGAGTCAGAGATTCTGTTACTTCCATACAAAGAAGTAACCTCAAC TGCTGGTGACATGTTAAATGAAGGTTGTGAGGTATCCTCAGCTGCTGTTGGTAGGGAAGA AGTTTCATTTAATGAGCCTGAGTCTGATGCACAGTCTTTGTGCAATGCTTCTGTTTCTCA GGCCAATGGACTGAGAGAAGCTAGTTTTACTGTTTCAAACATCAGCATGTCTGATCCGGA AGAGCTTGATATTACAGATGCTCCTGTATCAGTGAAGAGTTGTTTGGCTTATTTTACAAA GCCTGAGCTTCTTTCCAAAAGTGAACATGCTTGGCAATGTGAAAATTGCACAAAAGTTCT AAAAGAAAAGAGAATGAGATCTAAGAATAAATTGACGAAGCCTAGATCACATAGCATGGT AAATGGACACGAGGACAAAAATCCAGATGGTGTGTCTTCTTCAGGAACATTCCCAAAGGG AACCAGCCCTCGAGCTGATCGAGATTCAGGGTCTTCGCTATCGGAAAACGGCACACAGGA AAATCACAGTGAAACTAGCAGTCAAGTGAATATAGACTATCAGACCAATAAAGTTCAATT GCTGGAAGCTCCGCTGGTTTCTGATATATCTGAATCTGAAGAAAGTGAGAATGAGGAGAC AGACTATAAAAGAGTTAGAGTTGAAAGGGATGCAACTAAGCGGATCCTAATTGATAAGGT CCCTCCTATTTTGTCAATTCATCTAAAGAGGTTCCGTCAAGATGCTCGGGGGCGCTTGAG TAAGCTGAGTTGCCATGTCAATTTTAGAGAAGCACTTGATCTGAAACCATATGTTGACAC CAGGTACCTGCAGAAGGATACATACAAATACCAGCTTATTGGTGTAGTAGTACATTCGGG TACGATGAGGGGAGGTCATTATGTTGCATATGTTAGAGGAGGTCCCAAGATCACAGGGAA AGAAGAGAACGAGGAAGATTTCGTGTGGTATTATGCAAGTGATACTCATGTTCGTGAGGT TTCATTAAAAGATGTTCTTCGCTCTGAGGCATACATTTTATTCTACGAAGAAACTTGATA TAGATTTCTTAATTTATGATAATTTTTTGGTATACACACACAGAAGGAAAAGGAGGGGAG AGTGAGTTATCTCCAGTATCAACACCCATTTTTTATTTTCAAATTTTGATAGTGTAATTG ATCAAGGAAGTTACATACTTTAGAATGTAATATTTTAAGAAAGATAATATGATTTGTTCT TTTTTCATGAGAATTGAAATAGTATACTGGATGAAAATAAACATATCAAGGGGCGGAGCT AGACTTCTAGATATAAC