Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc05g053660.2.1
CDS Infomation	basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AHRD V3.3 *** AT3G24140.1)
Sequence	ATGGAGAAAGAAGAAAATTGCCAGGCTAATAATACTTTGCCTACATCTTTTCAAATGGCA ATTATTGGTGAATCTTCATCAAATAATACTAATAATCAAATGGTTGATTATATGGTAGAT TCACAATCTATACAACAACAACAACATAACCAGAGTTCGTTAGGGTTTTTACCCTCGAAC CCTTCTCTAGACAAGTTGAGCTTTGCTGATGTGATGCAATTCGCGGATTTTGGGCCTAAA TTAGCCTTAAATCAAACCAAGGTATTGGAACAAGATGTTGGGATTGATGATCCTGTGTAC TTCCTCAAGTTTCCCGTTTTGAACGAGAAGAAGAATGATAATGATAATGATGATGATCGC GAAGAAGGCTTAATGATAAGTGGTGGAAAAGAAAAAAGTGAAAATAATAATAATAATGTT GAAAAAAATCAAGAAGGGAAGAGTAATAATAAGAGAAAGAGGCCAAGAATTAAGACAAGT GAGGAAGTTGAGAGCCAAAGAATGACACATATTGCTGTGGAAAGGAATAGAAGGAAGCAA ATGAATGAACATCTTCGTGTATTGAGGTCTCTCATGCCTGGCTCCTATGTTCAAAGGGGA GATCAAGCATCTATTATTGGTGGAGCAATTGAATTTGTTAGAGAATTGGAACAACTCTTA CAATGCCTTGAATCACAAAAAAGAAGAAGAATCTATGGAGATACTCCAACAAGACCATTA GGAGATTCATCAACACCACCATCAATGCCAATGAATCAAAACCCTAGTGCTATAAATCCT CATCATCATCAATCACCAATACTATTTCCTCTTCCAAATGAGTATAATATTGAAGATGAA ATTCAAGAAGAAGTAGCTGAGAGTAAGTCTTGTTTGGCTGATGTTGAAGTGAAACTTTTA GGGTTTGATGCAATGATCAAGATTCTATCAAGAAGAAGACCAGGACAACTCATAAAGGCA ATTGCTGCATTGGAAGATATGCAACTTAGTATTCTTCATACAAATATTACAACCATTGAA CAAACTGTTCTCTACTCATTCAATGTCAAGATTTCTGGTGAAACTAGATACACAGCTGAT GATATAGCAAACTCAATCCAACAGATATTCAGTTTCATTCATGCTGAAATAGCCCCATAT GATATCAACTAG

Peptide Sequence

PEP ID	Solyc05g053660.2.1
PEP Infomation	basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AHRD V3.3 *** AT3G24140.1)
Sequence	MEKEENCQANNTLPTSFQMAIIGESSSNNTNNQMVDYMVDSQSIQQQQHNQSSLGFLPSN PSLDKLSFADVMQFADFGPKLALNQTKVLEQDVGIDDPVYFLKFPVLNEKKNDNDNDDDR EEGLMISGGKEKSENNNNNVEKNQEGKSNNKRKRPRIKTSEEVESQRMTHIAVERNRRKQ MNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRIYGDTPTRPL GDSSTPPSMPMNQNPSAINPHHHQSPILFPLPNEYNIEDEIQEEVAESKSCLADVEVKLL GFDAMIKILSRRRPGQLIKAIAALEDMQLSILHTNITTIEQTVLYSFNVKISGETRYTAD DIANSIQQIFSFIHAEIAPYDIN*

Transcript Sequence

Transcript ID	Solyc05g053660.2.1
Transcript Infomation	basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AHRD V3.3 *** AT3G24140.1)
Sequence	GCAAAATCTCACTTAAGTTTTATCCTCTTCATATTGTTCAAATTATAAGCTAGAGGTGGA CCCTAGGAGTGATCAAATTATTCAGTGAAGATTTGAGTTTGCATGGATTTGTGAATAGTC AAAATTTTAGGGTTGTATAAAAAACAAACAAAAAGAAAGAAAAAAAAACTATAACAAGAC AATGGAGAAAGAAGAAAATTGCCAGGCTAATAATACTTTGCCTACATCTTTTCAAATGGC AATTATTGGTGAATCTTCATCAAATAATACTAATAATCAAATGGTTGATTATATGGTAGA TTCACAATCTATACAACAACAACAACATAACCAGAGTTCGTTAGGGTTTTTACCCTCGAA CCCTTCTCTAGACAAGTTGAGCTTTGCTGATGTGATGCAATTCGCGGATTTTGGGCCTAA ATTAGCCTTAAATCAAACCAAGGTATTGGAACAAGATGTTGGGATTGATGATCCTGTGTA CTTCCTCAAGTTTCCCGTTTTGAACGAGAAGAAGAATGATAATGATAATGATGATGATCG CGAAGAAGGCTTAATGATAAGTGGTGGAAAAGAAAAAAGTGAAAATAATAATAATAATGT TGAAAAAAATCAAGAAGGGAAGAGTAATAATAAGAGAAAGAGGCCAAGAATTAAGACAAG TGAGGAAGTTGAGAGCCAAAGAATGACACATATTGCTGTGGAAAGGAATAGAAGGAAGCA AATGAATGAACATCTTCGTGTATTGAGGTCTCTCATGCCTGGCTCCTATGTTCAAAGGGG AGATCAAGCATCTATTATTGGTGGAGCAATTGAATTTGTTAGAGAATTGGAACAACTCTT ACAATGCCTTGAATCACAAAAAAGAAGAAGAATCTATGGAGATACTCCAACAAGACCATT AGGAGATTCATCAACACCACCATCAATGCCAATGAATCAAAACCCTAGTGCTATAAATCC TCATCATCATCAATCACCAATACTATTTCCTCTTCCAAATGAGTATAATATTGAAGATGA AATTCAAGAAGAAGTAGCTGAGAGTAAGTCTTGTTTGGCTGATGTTGAAGTGAAACTTTT AGGGTTTGATGCAATGATCAAGATTCTATCAAGAAGAAGACCAGGACAACTCATAAAGGC AATTGCTGCATTGGAAGATATGCAACTTAGTATTCTTCATACAAATATTACAACCATTGA ACAAACTGTTCTCTACTCATTCAATGTCAAGATTTCTGGTGAAACTAGATACACAGCTGA TGATATAGCAAACTCAATCCAACAGATATTCAGTTTCATTCATGCTGAAATAGCCCCATA TGATATCAACTAGTTGAAGACCATTTAAATTTTTCATTGTACTTTCTAGTTTCTAGCTAG GTGGTGTGTTCTT