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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g053480.3.1
CDS Infomation

hydroxyethylthiazole kinase family protein (AHRD V3.3 *** AT3G24030.1)
Sequence

ATGGAAGAAGACAAAAGTAGTAACACCATTGAACCCCAAAAGGGAGCTCAAGAACTCCCT
TTTGATTGGCCCAAACAAGCATGGACACATTTCGAATTAGTTCGTCAAAAATCCCCATTA
ATTCAATGTATAACCAACTTCGTTTCAATGGATTTCATGGCCAATACTCTGTTATCCGCC
GGCGCATCACCGGCGATGATTCATTCCGTTGAAGAAATCCCAGAATTTACTCCAAAAGCC
CTTGGAGTTTGCATAAATGCCGGAACCCTCACTCCGGACTGGCTACCCGGTATGAAATTA
GCGGCACAAGTGGCGAATCAATCGAAAAAACCTTGGGTGCTTGATCCTGTTGCTGCCGGT
GGGTCAAGTTTCCGGTTAAAGGCGTGTTTGGAGCTACTTGCTTTAAAACCTAGTGTTGTT
AGAGGCAATGGGTCTGAGATTCTTGCTCTTTTCAAGGGTTGTGTTGACTCAAATTCCAAG
GGTGTGGATAGTGTACATGGTTCAAGTGATGCTGTTGAAGCTGCTAAGTCCATCGCTCAA
CAAAGTGGTAGTGTAGTCGCTGTTTCTGGAGCTGTTGACTATATCACAGACGGTGATAGG
GTTGTTTGTGTTCACAATGGGGTGCCTATGTTGCAAAAGATTACTGCATCTGGATGTTCA
GTCACTGCCCTCATTGCTGCCTTTGTCGCTGTTGATCCATCCCATGCTGTGGAAGCAACA
GCTTCTGCATTGGCTATATTTGGTGTCGCAAGTGAAACAGGGATGGACATGGCTAGAGGT
CCAGCTTCACTGCGGACACTGTTGATTGATTCGTTATATGGACTTGGGGAAGCTACTGCA
CTTAGTCGAGTAAGAATCAACCACCTTTAA

Peptide Sequence

PEP ID

Solyc05g053480.3.1
PEP Infomation

hydroxyethylthiazole kinase family protein (AHRD V3.3 *** AT3G24030.1)
Sequence

MEEDKSSNTIEPQKGAQELPFDWPKQAWTHFELVRQKSPLIQCITNFVSMDFMANTLLSA
GASPAMIHSVEEIPEFTPKALGVCINAGTLTPDWLPGMKLAAQVANQSKKPWVLDPVAAG
GSSFRLKACLELLALKPSVVRGNGSEILALFKGCVDSNSKGVDSVHGSSDAVEAAKSIAQ
QSGSVVAVSGAVDYITDGDRVVCVHNGVPMLQKITASGCSVTALIAAFVAVDPSHAVEAT
ASALAIFGVASETGMDMARGPASLRTLLIDSLYGLGEATALSRVRINHL*

Transcript Sequence

Transcript ID

Solyc05g053480.3.1
Transcript Infomation

hydroxyethylthiazole kinase family protein (AHRD V3.3 *** AT3G24030.1)
Sequence

TAAGATTTACGAACACTCTATCTCCGGTAACATAGTGATATCATATCCAATCATATACTC
CCTCTTTTTCATAATCCAATCATCCAAACAGAGCTATCAGCTCGCTTATAGACTCCTATG
GAAGAAGACAAAAGTAGTAACACCATTGAACCCCAAAAGGGAGCTCAAGAACTCCCTTTT
GATTGGCCCAAACAAGCATGGACACATTTCGAATTAGTTCGTCAAAAATCCCCATTAATT
CAATGTATAACCAACTTCGTTTCAATGGATTTCATGGCCAATACTCTGTTATCCGCCGGC
GCATCACCGGCGATGATTCATTCCGTTGAAGAAATCCCAGAATTTACTCCAAAAGCCCTT
GGAGTTTGCATAAATGCCGGAACCCTCACTCCGGACTGGCTACCCGGTATGAAATTAGCG
GCACAAGTGGCGAATCAATCGAAAAAACCTTGGGTGCTTGATCCTGTTGCTGCCGGTGGG
TCAAGTTTCCGGTTAAAGGCGTGTTTGGAGCTACTTGCTTTAAAACCTAGTGTTGTTAGA
GGCAATGGGTCTGAGATTCTTGCTCTTTTCAAGGGTTGTGTTGACTCAAATTCCAAGGGT
GTGGATAGTGTACATGGTTCAAGTGATGCTGTTGAAGCTGCTAAGTCCATCGCTCAACAA
AGTGGTAGTGTAGTCGCTGTTTCTGGAGCTGTTGACTATATCACAGACGGTGATAGGGTT
GTTTGTGTTCACAATGGGGTGCCTATGTTGCAAAAGATTACTGCATCTGGATGTTCAGTC
ACTGCCCTCATTGCTGCCTTTGTCGCTGTTGATCCATCCCATGCTGTGGAAGCAACAGCT
TCTGCATTGGCTATATTTGGTGTCGCAAGTGAAACAGGGATGGACATGGCTAGAGGTCCA
GCTTCACTGCGGACACTGTTGATTGATTCGTTATATGGACTTGGGGAAGCTACTGCACTT
AGTCGAGTAAGAATCAACCACCTTTAATGCTTTTAGACGAGAAATCAATGTGTCCATTTC
ATTTAAATCTAACTCTCATTTATTTTT