Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g053280.3.1
CDS Infomation

Galactosyltransferase family protein (AHRD V3.3 *** AT3G06440.1)
Sequence

ATGAAGAAGTATTTGTTTATTAGAAAAGTGGGAAGGAAGAGATGGGCTGGATGCCTACTT
ATTATTGGTCTTGCAATGGTCTTGGTGATTCGATATAGTAGTGTAGAAAAATCATACAGC
ATTGTAGAAAAGTCAGACAGCAGTGTGGAAGAATCTCCGAAAAAGCAATCAGTTTATGGG
TTTTTCAATGACCATCCAGATATTAATGAAGGTTCGAAGGATGAAAATGCCAAGTCGTCT
GATCTGTATCCAATAGAGCTAGTAACTTTTAAGGAAAAACCACATCTTATTGATGTCGAA
GGGCTTAATGATCTATACAACATGAACAATTTTTCGACAGAAGAGTCTAACGCATTGCTA
GCATGGGGCAAGATGAGATTGTTGTTGTCTAGATCAGATGGTTTGAATGGAACTGCTCAA
GGAGTTAAGGAGGCTGCCATATCATGGAAAGATTTAGTGTCGTTCATTGAGAAAAGCAAA
GCTCAAGATGAGAAGGAAAATGAGGATTGTCCTTATTCTGTGACTGCATTCAATCCCGCG
ATGTCGAAGGACGGGAGCAGTCTTAGGATCCCTTGTGGCTTAGTTGAGGATTCATCTATT
ACTGTGATAGGCATACCTGATGCAAAACAAGAAGGTTTTCAAATTGAGCTTGTAGGTTCG
AAACTTCTAGAGGAAACAAAGCCTCCTATAGTTTTGAATTATAAAGTAATTTTGCCGGGG
GAGAATTTGACAAAGGATCCCCTTATCACCCAAAATTCATGGACTAATGAATCCGGGTGG
GGTAAGGTGGAAAAGTGCCCCGATCATGGCTCTACCGACATGATAAAAGTTGATGGATTA
GTCAAATGCAATGCCAAAATTTTCCGATATAATATAGAAGAAACTGCAAATATGACCAAT
ACCAGCCATCCAAAGTCTTCAGATGTATCAAATTCTAGTGCCTACGGTACTGCCAATTAC
CCTTTTCTTGAAGGTAATCCATTTACTGCAACACTATGGGCTGGTATAGAGGGGTTCCAT
ATGACAGTAAACGGAAGACACGAGACGTCTTTTGCATATAGAGAGAAACTCGAACCTTGG
TTGGTTAGTGGAGTCAATGTGATAGGTGGTGTGGACACCATATCGATCTTAGCGAAAGGA
TTACCTGTTTCCAATGATTTTAACTTGGGTTATGATGTTGAGCAACTCAAAGCTCCATTA
ACTCCTAAAAAGAGACTTGTCATGTTAATTGGAGTTTTCTCTACTGGAAACAATTTTGAG
AGACGTATGGCGCTAAGGAAATCATGGATGCAATATGAAGCTGTGCGGTCAGGAGAAGTA
GCTGTCCGATTTTTTATTGGTCTTGACAAAAATAGGCAGGTCAATTTTGAGCTATGGAAG
GAAGCACAAGCCTATGGAGATATCCAACTATTGCCTTTTGTTGATTACTACAGCCTGCTC
ACTGTGAAGACCATAGCAATTTGCATTATGGGTGTTAAAATTCTGCCTGCCAAATATGTT
ATGAAGACGGACGATGATGCTTTTGTAAGGATTGATGAAGTTCTATCTAGTCTCAAGGGA
AAGGATCCTAATGGTCTATTATATGGTGGGATATCTTTTGAATCAACACCCCACAGAGAT
AAAGAAAACAAGTGGTATATCAGTCCTGAGGAATATCCGCCTGCTTTCTATCCCCCATGG
GCACATGGACCAGGTTATATTATTTCTCGAGATATAGCTAAGTTCATTGTTCAGGGCCAT
CAAGAAATGGAACTGATGCTTTTTAAACTTGAGGATGTTGCTGTGGGCATTTGGGTTGAG
GAATTCAGGAGGAAGGGTCACAAAGTACAGTATGTTAATGATGAAAGATTTTACAATGCC
GGTTGTGATTCAGGATATGTTCTTGCTCATTATCAGAATCCGAGGATGGTACTATGTCTG
TGGGAGAAACTGCAGAAAGAGCACGAACCAAACTGCTGCGAGTGA

Peptide Sequence

PEP ID

Solyc05g053280.3.1
PEP Infomation

Galactosyltransferase family protein (AHRD V3.3 *** AT3G06440.1)
Sequence

MKKYLFIRKVGRKRWAGCLLIIGLAMVLVIRYSSVEKSYSIVEKSDSSVEESPKKQSVYG
FFNDHPDINEGSKDENAKSSDLYPIELVTFKEKPHLIDVEGLNDLYNMNNFSTEESNALL
AWGKMRLLLSRSDGLNGTAQGVKEAAISWKDLVSFIEKSKAQDEKENEDCPYSVTAFNPA
MSKDGSSLRIPCGLVEDSSITVIGIPDAKQEGFQIELVGSKLLEETKPPIVLNYKVILPG
ENLTKDPLITQNSWTNESGWGKVEKCPDHGSTDMIKVDGLVKCNAKIFRYNIEETANMTN
TSHPKSSDVSNSSAYGTANYPFLEGNPFTATLWAGIEGFHMTVNGRHETSFAYREKLEPW
LVSGVNVIGGVDTISILAKGLPVSNDFNLGYDVEQLKAPLTPKKRLVMLIGVFSTGNNFE
RRMALRKSWMQYEAVRSGEVAVRFFIGLDKNRQVNFELWKEAQAYGDIQLLPFVDYYSLL
TVKTIAICIMGVKILPAKYVMKTDDDAFVRIDEVLSSLKGKDPNGLLYGGISFESTPHRD
KENKWYISPEEYPPAFYPPWAHGPGYIISRDIAKFIVQGHQEMELMLFKLEDVAVGIWVE
EFRRKGHKVQYVNDERFYNAGCDSGYVLAHYQNPRMVLCLWEKLQKEHEPNCCE*

Transcript Sequence

Transcript ID

Solyc05g053280.3.1
Transcript Infomation

Galactosyltransferase family protein (AHRD V3.3 *** AT3G06440.1)
Sequence

TTGTGAGGTTCATTTTACTGTAAAAGAGAGAAGTATAGAAGAAAGAGAGGCAGAAAGTTG
ATTTTTTTTAATTTTCAAGAATGTTGAAATCTGCATATATTAGCTGAGGTGTGTGAAGAT
TTTAGTGATGGGGTTAGGTGCAAAACTGAAAATTCAAGTTTTTCAGTTCTTGGGTGTTAA
AAACTAAGGATTTGATTCACTGTGGTGGAACACTAGTTTTTGTGTTTTTGTGTCATATTG
GGGCTTTAATTTTGATTCACGTCGACAAAGAAGTCTCGCATTAGGGGGTAAAGTGTTCCT
TTACTAAGGGGACTTCATACCGAGGGCTTGAACACGAGACCTTCGGTTAAGTATAAGCTG
AGGTATAGTGTGAATGAAGAAGTATTTGTTTATTAGAAAAGTGGGAAGGAAGAGATGGGC
TGGATGCCTACTTATTATTGGTCTTGCAATGGTCTTGGTGATTCGATATAGTAGTGTAGA
AAAATCATACAGCATTGTAGAAAAGTCAGACAGCAGTGTGGAAGAATCTCCGAAAAAGCA
ATCAGTTTATGGGTTTTTCAATGACCATCCAGATATTAATGAAGGTTCGAAGGATGAAAA
TGCCAAGTCGTCTGATCTGTATCCAATAGAGCTAGTAACTTTTAAGGAAAAACCACATCT
TATTGATGTCGAAGGGCTTAATGATCTATACAACATGAACAATTTTTCGACAGAAGAGTC
TAACGCATTGCTAGCATGGGGCAAGATGAGATTGTTGTTGTCTAGATCAGATGGTTTGAA
TGGAACTGCTCAAGGAGTTAAGGAGGCTGCCATATCATGGAAAGATTTAGTGTCGTTCAT
TGAGAAAAGCAAAGCTCAAGATGAGAAGGAAAATGAGGATTGTCCTTATTCTGTGACTGC
ATTCAATCCCGCGATGTCGAAGGACGGGAGCAGTCTTAGGATCCCTTGTGGCTTAGTTGA
GGATTCATCTATTACTGTGATAGGCATACCTGATGCAAAACAAGAAGGTTTTCAAATTGA
GCTTGTAGGTTCGAAACTTCTAGAGGAAACAAAGCCTCCTATAGTTTTGAATTATAAAGT
AATTTTGCCGGGGGAGAATTTGACAAAGGATCCCCTTATCACCCAAAATTCATGGACTAA
TGAATCCGGGTGGGGTAAGGTGGAAAAGTGCCCCGATCATGGCTCTACCGACATGATAAA
AGTTGATGGATTAGTCAAATGCAATGCCAAAATTTTCCGATATAATATAGAAGAAACTGC
AAATATGACCAATACCAGCCATCCAAAGTCTTCAGATGTATCAAATTCTAGTGCCTACGG
TACTGCCAATTACCCTTTTCTTGAAGGTAATCCATTTACTGCAACACTATGGGCTGGTAT
AGAGGGGTTCCATATGACAGTAAACGGAAGACACGAGACGTCTTTTGCATATAGAGAGAA
ACTCGAACCTTGGTTGGTTAGTGGAGTCAATGTGATAGGTGGTGTGGACACCATATCGAT
CTTAGCGAAAGGATTACCTGTTTCCAATGATTTTAACTTGGGTTATGATGTTGAGCAACT
CAAAGCTCCATTAACTCCTAAAAAGAGACTTGTCATGTTAATTGGAGTTTTCTCTACTGG
AAACAATTTTGAGAGACGTATGGCGCTAAGGAAATCATGGATGCAATATGAAGCTGTGCG
GTCAGGAGAAGTAGCTGTCCGATTTTTTATTGGTCTTGACAAAAATAGGCAGGTCAATTT
TGAGCTATGGAAGGAAGCACAAGCCTATGGAGATATCCAACTATTGCCTTTTGTTGATTA
CTACAGCCTGCTCACTGTGAAGACCATAGCAATTTGCATTATGGGTGTTAAAATTCTGCC
TGCCAAATATGTTATGAAGACGGACGATGATGCTTTTGTAAGGATTGATGAAGTTCTATC
TAGTCTCAAGGGAAAGGATCCTAATGGTCTATTATATGGTGGGATATCTTTTGAATCAAC
ACCCCACAGAGATAAAGAAAACAAGTGGTATATCAGTCCTGAGGAATATCCGCCTGCTTT
CTATCCCCCATGGGCACATGGACCAGGTTATATTATTTCTCGAGATATAGCTAAGTTCAT
TGTTCAGGGCCATCAAGAAATGGAACTGATGCTTTTTAAACTTGAGGATGTTGCTGTGGG
CATTTGGGTTGAGGAATTCAGGAGGAAGGGTCACAAAGTACAGTATGTTAATGATGAAAG
ATTTTACAATGCCGGTTGTGATTCAGGATATGTTCTTGCTCATTATCAGAATCCGAGGAT
GGTACTATGTCTGTGGGAGAAACTGCAGAAAGAGCACGAACCAAACTGCTGCGAGTGATC
GTGCTGTAATCCTGAACGTTGCAAATCGACTAGTGAGTACAATCTTTTTGCAGATACAAT
GGTTCTGTTTGTTTGTTCTTTGACAAAGGTCATCAAACTGCAACTGTATATTGTTTCATT
GGCATTATATTGTTGTTATTCATGTAATCTATGTGCCTTCTTATGTTGTCTTGGTAAGCT
GATGTTGAATGTTGAAAAAGGAGTAATAGAACTGAAGATATTTATACATATACTATGACA