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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc05g053170.3.1
CDS Infomation

Chalcone synthase (AHRD V3.3 *** CHSY_PERFR)
Sequence

ATGAAATTAGAAAATGGTCAAAAAATTGGGAGGGTTCATGAGAGAGCTGAGGGTCCAGCG
AAAATTTTAGCCATTGGGACAGCAACTCCTTTTCATTGGGTTGATCAAACCTCGTATCCT
GATTATTATTTCAAAGTTACAAATAATGAGCATTTGGTGGACCTCAAAGAAAAATTTAGA
CGTATTTGCAGCAGAACAATGATTAGGAAAAGGCATATGCTTTTAACAGAAGAAATATTA
AAGAAAAATCCTAATTTGTGTTCTTATAATGGGCCTTCCCTTGATATTAGGCAAGACATT
TTGGTCTCAGAAATACCCAAACTTGGTAAAGAGGCTGCCCTTAGGGCCATTGATGAATGG
GCTCAGCCCAAATCAAATATTACCCATTTAGTCTTTTGTACTAGAAGTGGTGTGGACATG
CCTGGTGCGGATTACCAATTAATTAACTTATTGGGCCTAAGCCCATCGGTTCAACGATTC
ATGATGTATCAACAAGGTTGTTTTGCCGGTGGCACGATGCTCCGGTTAGCCAAGGACTTA
GCTGAGAACAACAAGGGTGCTAGGGTGCTTGTTGTGTGTGCTGAGAGCTCAGCGATAGGG
TTTCGCGGGCCGAGTGAAGCTTATCCCGATAACCTTATCGCGCAAGCATTGTTCGGAGAC
GGTGCGGTCGCGGTTATAATTGGGTCGGACCCTAAAATGGGCCTGGAGAGGCCCGTTTTC
GAGATTGTCTCGGCGGGCCAGACGTTTGTACCTAACGGGGATTGCCACCTCGCGTTACAC
TTACGCGAGATGGGCCTTACGTTTCATTGTACCAGAGACGTACCACCGGCCATCGCGAAA
AATGTGGAGAGTTGCTTAATAAAGGCGTTTGAACCGTTAGGCATTTCAGATTGGAACTCG
GTGTTTTGGATTCTTCATCCAGGAGGTAATGCGATTGTGGACCAAGTCGAAAACATATTG
GGCCTCGAGCCCGATAGGTTACGGGCCACGAGAAATATCCTTCGAGAATACGGTAACTTG
TCGAGTGCATGTGTTTTATTCATATTGGATGAGATAAGAAAAAAATCTGCTAGAGATGGG
CTGAAGACTACTGGAGATGGGCTGGACTTGGGAGTCCTTTTATCATTTGGGCCTGGCCTT
ACAATTGAGACCGTTGTGCTTCGTAGTATGCCCATTTAA

Peptide Sequence

PEP ID

Solyc05g053170.3.1
PEP Infomation

Chalcone synthase (AHRD V3.3 *** CHSY_PERFR)
Sequence

MKLENGQKIGRVHERAEGPAKILAIGTATPFHWVDQTSYPDYYFKVTNNEHLVDLKEKFR
RICSRTMIRKRHMLLTEEILKKNPNLCSYNGPSLDIRQDILVSEIPKLGKEAALRAIDEW
AQPKSNITHLVFCTRSGVDMPGADYQLINLLGLSPSVQRFMMYQQGCFAGGTMLRLAKDL
AENNKGARVLVVCAESSAIGFRGPSEAYPDNLIAQALFGDGAVAVIIGSDPKMGLERPVF
EIVSAGQTFVPNGDCHLALHLREMGLTFHCTRDVPPAIAKNVESCLIKAFEPLGISDWNS
VFWILHPGGNAIVDQVENILGLEPDRLRATRNILREYGNLSSACVLFILDEIRKKSARDG
LKTTGDGLDLGVLLSFGPGLTIETVVLRSMPI*

Transcript Sequence

Transcript ID

Solyc05g053170.3.1
Transcript Infomation

Chalcone synthase (AHRD V3.3 *** CHSY_PERFR)
Sequence

TGCACCACCCCAAACCAAAACATTTCCATTTATCTTTTGCCTTTGCCATTTCTTATTTCT
AACTAATATTCGAATTTCTTTTGTTTCATCGATTTTATTTAGATTTTACCTTTTTTTTCG
AAAAAATGAAATTAGAAAATGGTCAAAAAATTGGGAGGGTTCATGAGAGAGCTGAGGGTC
CAGCGAAAATTTTAGCCATTGGGACAGCAACTCCTTTTCATTGGGTTGATCAAACCTCGT
ATCCTGATTATTATTTCAAAGTTACAAATAATGAGCATTTGGTGGACCTCAAAGAAAAAT
TTAGACGTATTTGCAGCAGAACAATGATTAGGAAAAGGCATATGCTTTTAACAGAAGAAA
TATTAAAGAAAAATCCTAATTTGTGTTCTTATAATGGGCCTTCCCTTGATATTAGGCAAG
ACATTTTGGTCTCAGAAATACCCAAACTTGGTAAAGAGGCTGCCCTTAGGGCCATTGATG
AATGGGCTCAGCCCAAATCAAATATTACCCATTTAGTCTTTTGTACTAGAAGTGGTGTGG
ACATGCCTGGTGCGGATTACCAATTAATTAACTTATTGGGCCTAAGCCCATCGGTTCAAC
GATTCATGATGTATCAACAAGGTTGTTTTGCCGGTGGCACGATGCTCCGGTTAGCCAAGG
ACTTAGCTGAGAACAACAAGGGTGCTAGGGTGCTTGTTGTGTGTGCTGAGAGCTCAGCGA
TAGGGTTTCGCGGGCCGAGTGAAGCTTATCCCGATAACCTTATCGCGCAAGCATTGTTCG
GAGACGGTGCGGTCGCGGTTATAATTGGGTCGGACCCTAAAATGGGCCTGGAGAGGCCCG
TTTTCGAGATTGTCTCGGCGGGCCAGACGTTTGTACCTAACGGGGATTGCCACCTCGCGT
TACACTTACGCGAGATGGGCCTTACGTTTCATTGTACCAGAGACGTACCACCGGCCATCG
CGAAAAATGTGGAGAGTTGCTTAATAAAGGCGTTTGAACCGTTAGGCATTTCAGATTGGA
ACTCGGTGTTTTGGATTCTTCATCCAGGAGGTAATGCGATTGTGGACCAAGTCGAAAACA
TATTGGGCCTCGAGCCCGATAGGTTACGGGCCACGAGAAATATCCTTCGAGAATACGGTA
ACTTGTCGAGTGCATGTGTTTTATTCATATTGGATGAGATAAGAAAAAAATCTGCTAGAG
ATGGGCTGAAGACTACTGGAGATGGGCTGGACTTGGGAGTCCTTTTATCATTTGGGCCTG
GCCTTACAATTGAGACCGTTGTGCTTCGTAGTATGCCCATTTAAATAATGGGCCCATTAT
GTCTTTTTACTTGGGCCTGGCCTTTTATGATGTTTCATTTCATTTGGTTGAAGTTTTTTT
CATCTATATGCATGTATTAATAAATAATTGAGTAAAATA